Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci997g0002 ATGGCTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAACTGTTGTGATTGGGTTCACAAACAAAAGCAGTCGAGGAATTCAAAGATCAGACAGCCAGATGGCCCTTTCAAAGAAGCTTTTCTTTCATCTTGTACCAGCTGTTGGAGCATGTGGTTCATTGTTGGACATGATATTTCTATGGAGGAGAGAAATTAACAGGCACTTTGTTGGTTATCATAAGTGGTTTTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCAAGGTGTGTCAGCAGTCATTATATGCTTTGCAACTATGTTTTGTGTTACTGGTGGATTCTGAAGCCACTATTCTGGATCTTCCATTTGCTTACAAAGTTCCCATTGCTGGAGACTCCAATATGTGTTGTGGAAAGCTCTATTCTTCTCTTGAATATCACATTTGGCATAGCCATCAATGTCATAAGAGTAAAAACATTATCTTCCAAAAACAGTTCATTTGAAGATCCACTTCTTTCCAATGATATGGACCTTGAGGAAGGTAGCCATTGCGACCCTGAAGAAAAAACTAGGAACTTTTGTGATTTGATGACTTTCAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTAAACAACTGGACTTCGATGATCTTTTGCAACTTCCTCGAGACTTGGATCCTTCTTCCTGTCATGATATAATTTTGACCTGTTGGCAAGCACAACTGAGAAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTCTGCTGTGCATATGGATGGCCTTATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTCTTGGTTTTGCTGGACCATTGCTTCTCAATAAACTGATCCGGTTTCTTCAACAAGGCACAGAGAGTTTTGATGGATATTTATTTGCCATGTCCTTGGGCCTCACATCTGTAATTAAATCCTTTTTAGATACACAATATAGTTTTCATCTTTCCAAACTGAAGCTAAAGCTACGGTCTAGTATCATGACTCTAATCTATCACAAGTGTCTACGTGTGAACCTAGCAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTTATGTCTGTTGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCATGATATGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCGTTTCTATCTGGATTAGCAATTACCATTTTGTTGATACCAGATGCAACTGAGAAAATGATGAAGCAGAAGGATGAACGGATACGGAGGACAGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGGATGGGAACTTCTTTTTTCTGATTGGCTGATGGAGACAAGATCTTCTGAACTGAAACACTTGGCTACTCGGAAGTACTTGGATGCATGGTGTGTCTTCTTTTGGGCTACGACGCCAACTCTCTTTTCTCTTTTTACATTTGGACTCTATGCATTGATGGGGTACCAACTTGATGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTTAACACGTTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCTGTTGTATCCTCCAGGCGGTTGAGCAGGTTTCTTTCTTGTCCTGAAAATAAATCTAAGGTGAAAGAGATCAATTCATGTTCCTTGCCATTCCACAATGAACAACCTGACTCTTTACAAGGCTTAGCAGTCTTTGTCCATGATGCATGTTTTACGTGGTCTAGTAGTGATGAAGAAACATTAAATTTGGTGTTGAACCATGTCAGTCTAAGCTTGTCAAGGGGTTCCTTTGTTGCAGTGATAGGAGAGGTTGGTTCTGGGAAATCATCGCTGTTATATTCAATTCTTGGAGAAACACGGCTTGCTCATGGATCAATTAACTCTGATAGATCAGTGGCATATGTACCACAGGTCCCGTGGATTTTATCTGGAACAATACGTGACAACATAATATTTGGGAAAAATTATGATCCCCAAAGGTATGCAGAAACTGTGAGAGCATGTGCTCTAGATGTCGATATCTCATTAATGGTTGGAGGAGACATGGCTTACATTGGGGAAAAGGGAGTTAACTTATCTGGTGGACAAAGAACTCGTCTTGCTTTAGCCAGGGCATTGTATCATGGCTGTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCGATGGATCTTGCACAATGCCATTCTCGGTCCTCTTGTGCAGGGAAAAACTCGATTGCTTTGTACTCATAATATTCAGGCAATATCCTCTGCTGATATGGTTGTTATAATGGACAAAGGAAACATAAAGTGGGTGGGAAGTCCAAATGACCTCCAGGTCTCTTCATATATAACATTTTCCCCATTGAATGAACTTGATTCAGATGTACGGAATCAAGGAAAATCTTGCTGCACAAATTCTTCTTCCAAATTAAAAGAACTCTCAGATAGAGAAATTAAACATGTTGTGGAGGGTACTGAGGAGAACATCGAAGCTGAGTTGAGGAAAGAGGGAAAAGTGGAACTTGGAGTGTATAAGAACTACGCTATGTTCACTGGCTGGTTCATTACAGTTGTCATATGCCTGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGTTGTCATTTTGGGTTGATACAACAGAAAGCAGACAAACAAGATATTCTCTTTCCTTTTACCTGGCTATACTGGGTCTCTTTTGCATCATAAATTCTTTGCTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAACTAAAGTGCACAACAGAATGCTTGGTGATCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTTTCCTCAGATCTTTATACAATTGATGACTCTCTTCCGTTCATTATGAACATTCTCCTAGCTAATTTTGTTGGCCTCTTGGGCATTGCAGTAGTTGTGTCATATGTTCAGGTTTTTTTCTTAATCCTGCTATTGCCATTTTGGTATATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGAGAACTACGACGACTAGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAAACGCTCGATGGTTCATCAACTATTAGGGCATTCAAATCTGAGGACCTATTTTTTGCCAAGTTCACTGAACACGTGACATTGTATCAGAAGACTTCTTACACGGAGACAGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAATTATTAGCTGCATTTATCATCTCATTTATTGCACTGATGGCTGTGGTTGGAGCTCATGGCAGTCTGCCAATCAACTTTGGCACTCCTGGGCTGGTAGGATTGGCACTCTCATATGCAGCTCCGATAGTGTCCTTGTTGGGAAGCTTTTTAACAAGTGTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGTCCTTGAATATATGGACATTCCTCAAGAAGAAATTGCTGGACGCCTAACCTTGAACCCTGATTGGCCAAATCAAGGAGTAATTGAGTTCCAAAATGTTACTTTAAAATACAAGCCATCTTTGCCACCTGCACTATCCAATCTTAGTTTTACAATTGGTGGAGGGACACAGATTGGAATTATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCTCTTTTCCGCCTTACCCCAATATGTACAGGCTCTATTTTCATTGATGGCATAAACATTAACGATATTCCTGTCAGAGAACTACGTGCTCGTTTAGCTGTTGTTCCTCAGAGTCCATTTCTGTTTGAAGGATCATTAAGGGATAATCTAGATCCATTCCGAATGCATGGTGACTTGAAAATTTGGAATGCCTTGGAGAAATGCCATGTGAAAGAGGAAGTAGAAGCAGCTGGAGGGTTGCATATGCTCGTAAAGGAATCTGGGTCATCGTTTTCTGTTGGCCAAAGGCAACTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAGTGTACAGCCAATGTGGACACACAAACTGCTTCACTGCTGCAAAGTACCATATGTGATGAATGCAAGGGCATGACAGTAATTACAATTGCTCACCGGATCTCGACAGTTTTAAATATGGACAACATTTTAATCCTTGACCATGGGGACCTGGCTGAACAAGGAAATCCACAGGTTCTTATCAAACATGAATCCTTATTCTCCAGTTTTGCCAAAGCTTCATCAATGTGA 4287 0.4033 MALGFGLNAVTIVITVVIGFTNKSSRGIQRSDSQMALSKKLFFHLVPAVGACGSLLDMIFLWRREINRHFVGYHKWFYSCSELMVWTNIILFSRCVSSHYMLCNYVLCYWWILKPLFWIFHLLTKFPLLETPICVVESSILLLNITFGIAINVIRVKTLSSKNSSFEDPLLSNDMDLEEGSHCDPEEKTRNFCDLMTFKFINPVMNHGVVKQLDFDDLLQLPRDLDPSSCHDIILTCWQAQLRNNGSNPSLLRAVCCAYGWPYLRLGLLKVVNDCLGFAGPLLLNKLIRFLQQGTESFDGYLFAMSLGLTSVIKSFLDTQYSFHLSKLKLKLRSSIMTLIYHKCLRVNLAERSKFSNGEIQTFMSVDADRTVNMCNSFHDMWSLPLQIGVALYLLYTQVKFAFLSGLAITILLIPDATEKMMKQKDERIRRTGELLTYIRTLKMHGWELLFSDWLMETRSSELKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGYQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAVVSSRRLSRFLSCPENKSKVKEINSCSLPFHNEQPDSLQGLAVFVHDACFTWSSSDEETLNLVLNHVSLSLSRGSFVAVIGEVGSGKSSLLYSILGETRLAHGSINSDRSVAYVPQVPWILSGTIRDNIIFGKNYDPQRYAETVRACALDVDISLMVGGDMAYIGEKGVNLSGGQRTRLALARALYHGCDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRLLCTHNIQAISSADMVVIMDKGNIKWVGSPNDLQVSSYITFSPLNELDSDVRNQGKSCCTNSSSKLKELSDREIKHVVEGTEENIEAELRKEGKVELGVYKNYAMFTGWFITVVICLSAVLMQASRNGNDLWLSFWVDTTESRQTRYSLSFYLAILGLFCIINSLLTLVRAFSFAFGGLQAATKVHNRMLGDLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVVSYVQVFFLILLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDLFFAKFTEHVTLYQKTSYTETAASLWLSLRLQLLAAFIISFIALMAVVGAHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSVTETEKEMVSVERVLEYMDIPQEEIAGRLTLNPDWPNQGVIEFQNVTLKYKPSLPPALSNLSFTIGGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSIFIDGININDIPVRELRARLAVVPQSPFLFEGSLRDNLDPFRMHGDLKIWNALEKCHVKEEVEAAGGLHMLVKESGSSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTICDECKGMTVITIAHRISTVLNMDNILILDHGDLAEQGNPQVLIKHESLFSSFAKASSM 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci997g0002 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 577 804 IPR003439 GO:0005524
Prci997g0002 1428 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 871 1157 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0002 1428 FunFam ATP-binding cassette subfamily C member 10 243 550 - -
Prci997g0002 1428 SUPERFAMILY ABC transporter transmembrane region 257 549 IPR036640 GO:0005524|GO:0016020
Prci997g0002 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 576 793 IPR027417 -
Prci997g0002 1428 Pfam ABC transporter transmembrane region 872 1119 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0002 1428 Pfam ABC transporter transmembrane region 267 521 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0002 1428 FunFam ABC transporter C family member 5 836 1175 - -
Prci997g0002 1428 FunFam ATP-binding cassette (ABC) transporter, putative 1179 1425 - -
Prci997g0002 1428 Gene3D ABC transporter type 1, transmembrane domain 836 1175 IPR036640 GO:0005524|GO:0016020
Prci997g0002 1428 Gene3D ABC transporter type 1, transmembrane domain 240 551 IPR036640 GO:0005524|GO:0016020
Prci997g0002 1428 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1192 1425 IPR003439 GO:0005524
Prci997g0002 1428 ProSitePatterns ABC transporters family signature. 705 719 IPR017871 GO:0005524|GO:0016887
Prci997g0002 1428 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 268 533 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0002 1428 Pfam ABC transporter 598 730 IPR003439 GO:0005524
Prci997g0002 1428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1186 1423 IPR027417 -
Prci997g0002 1428 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 188 1425 - -
Prci997g0002 1428 CDD ABC_6TM_MRP7_D2_like 870 1169 - -
Prci997g0002 1428 CDD ABC_6TM_MRP7_D1_like 266 541 - -
Prci997g0002 1428 Gene3D - 553 815 IPR027417 -
Prci997g0002 1428 FunFam ABC transporter C family member 13 558 813 - -
Prci997g0002 1428 ProSitePatterns ABC transporters family signature. 1328 1342 IPR017871 GO:0005524|GO:0016887
Prci997g0002 1428 SMART AAA_5 607 781 IPR003593 GO:0016887
Prci997g0002 1428 SMART AAA_5 1218 1402 IPR003593 GO:0016887
Prci997g0002 1428 Pfam ABC transporter 1209 1356 IPR003439 GO:0005524
Prci997g0002 1428 CDD ABCC_MRP_domain2 1190 1409 - -
Prci997g0002 1428 Gene3D - 1177 1423 IPR027417 -
Prci997g0002 1428 CDD ABCC_MRP_domain1 579 780 - -
Prci997g0002 1428 SUPERFAMILY ABC transporter transmembrane region 867 1174 IPR036640 GO:0005524|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci997g0002 569 826 Calmodulin-binding Proteins AT2G36910 28.000 4.88e-21 98.6