Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci997g0001 ATGGCTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAACTGTTGTGATTGGGTTCACAAACAAAAGCAGTCGAGGAATTCAAAGATCAGACAGCCAGATGGCCCTTTCAAAGAAGCTTTTCTTTCATCTTGTACCAGCTGTTGGAGCATGTGGTTCATTGTTGGACATGATATTTCTATGGAGGAGAGAAATTAACAGGCACTTTGTTGGTTATCATAAGTGGTTTTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCAAGGTGTGTCAGCAGTCATTATATGCTTTGCAACTATGTTTTGTGTTACTGGTGGATTCTGAAGCCACTATTCTGGATCTTCCATTTGCTTACAAAGTTCCCATTGCTGGAGACTCCAATATGTGTTGTGGAAAGCTCTATTCTTCTCTTGAATATCACATTTGGCATAGCCATCAATGTCATAAGAGTAAAAACATTATCTTCCAAAAACAGTTCATTTGAAGATCCACTTCTTTCCAATGATATGGACCTTGAGGAAGGTAGCCATTGCGACCCTGAAGAAAAAACTAGGAACTTTTGTGATTTGATGACTTTCAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTAAACAACTGGACTTCGATGATCTTTTGCAACTTCCTCGAGACTTGGATCCTTCTTCCTGTCATGATATAATTTTGACCTGTTGGCAAGCACAACTGAGAAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTCTGCTGTGCATATGGATGGCCTTATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTCTTGGTTTTGCTGGACCATTGCTTCTCAATAAACTGATCCGGTTTCTTCAACAAGGCACAGAGAGTTTTGATGGATATTTATTTGCCATGTCCTTGGGCCTCACATCTGTAATTAAATCCTTTTTAGATACACAATATAGTTTTCATCTTTCCAAACTGAAGCTAAAGCTACGGTCTAGTATCATGACTCTAATCTATCACAAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTTATGTCTGTTGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCATGATATGTGGAGTCAATAAATGGATATCAAAATTGATTGCAGATGCAACTGAGAAAATGATGAAGCAGAAGGATGAACGGATACGGAGGACAGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGGATGGGAACTTCTTTTTTCTGATTGGCTGATGGAGACAAGATCTTCTGAACTGAAACACTTGGCTACTCGGAAGTACTTGGATGCATGGTGTGTCTTCTTTTGGGCTACGACGCCAACTCTCTTTTCTCTTTTTACATTTGGACTCTATGCATTGATGGGGTACCAACTTGATGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTTAACACGTTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCTGTTGTATCCTCCAGGCGGTTGAGCAGGTTTCTTTCTTGTCCTGAAAATAAATCTAAGGTGAAAGAGATCAATTCATGTTCCTTGCCATTCCACAATGAACAACCTGACTCTTTACAAGGCTTAGCAGTCTTTGTCCATGATGCATGTTTTACGTGGTCTAGTAGTGATGAAGAAACATTAAATTTGGTGTTGAACCATGTCAGTCTAAGCTTGTCAAGGGGTTCCTTTGTTGCAGTGATAGGAGAGGTTGGTTCTGGGAAATCATCGCTGTTATATTCAATTCTTGGAGAAACACGGCTTGCTCATGGATCAATTAACTCTGATAGATCAGTGGCATATGTACCACAGGTCCCGTGGATTTTATCTGGAACAATACGTGACAACATAATATTTGGGAAAAATTATGATCCCCAAAGGTATGCAGAAACTGTGAGAGCATGTGCTCTAGATGTCGATATCTCATTAATGGTTGGAGGAGACATGGCTTACATTGGGGAAAAGGGAGTTAACTTATCTGGTGGACAAAGAACTCGTCTTGCTTTAGCCAGGGCATTGTATCATGGCTGTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCGATGGATCTTGCACAATGCCATTCTCGGTCCTCTTGTGCAGGGAAAAACTCGATTGCTTTGTACTCATAATATTCAGGCAATATCCTCTGCTGATATGGTTGTTATAATGGACAAAGGAAACATAAAGTGGGTGGGAAGTCCAAATGACCTCCAGGTCTCTTCATATATAACATTTTCCCCATTGAATGAACTTGATTCAGATGTACGGAATCAAGGAAAATCTTGCTGCACAAATTCTTCTTCCAAATTAAAAGAACTCTCAGATAGAGAAATTAAACATGTTGTGGAGGGTACTGAGGAGAACATCGAAGCTGAGTTGAGGAAAGAGGGAAAAGTGGAACTTGGAGTGTATAAGAACTACGCTATGTTCACTGGCTGGTTCATTACAGTTGTCATATGCCTGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGTTGTCATTTTGGGTTGATACAACAGAAAGCAGACAAACAAGATATTCTCTTTCCTTTTACCTGGCTATACTGGGTCTCTTTTGCATCATAAATTCTTTGCTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAACTAAAGTGCACAACAGAATGCTTGGTGATCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTTTCCTCAGATCTTTATACAATTGATGACTCTCTTCCGTTCATTATGAACATTCTCCTAGCTAATTTTGTTGGCCTCTTGGGCATTGCAGTAGTTGTGTCATATGTTCAGGTTTTTTTCTTAATCCTGCTATTGCCATTTTGGTATATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGAGAACTACGACGACTAGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAAACGCTCGATGGTTCATCAACTATTAGGGCATTCAAATCTGAGGACCTATTTTTTGCCAAGTTCACTGAACACGTGACATTGTATCAGAAGACTTCTTACACGGAGACAGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAATTATTAGCTGCATTTATCATCTCATTTATTGCACTGATGGCTGTGGTTGGAGCTCATGGCAGTCTGCCAATCAACTTTGGCACTCCTGGGCTGGTAGGATTGGCACTCTCATATGCAGCTCCGATAGTGTCCTTGTTGGGAAGCTTTTTAACAAGTGTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGTCCTTGAATATATGGACATTCCTCAAGAAGAAATTGCTGGACGCCTAACCTTGAACCCTGATTGGCCAAATCAAGGAGTAATTGAGTTCCAAAATGTTACTTTAAAATACAAGCCATCTTTGCCACCTGCACTATCCAATCTTAGTTTTACAATTGGTGGAGGGACACAGATTGGAATTATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCTCTTTTCCGCCTTACCCCAATATGTACAGGCTCTATTTTCATTGATGGCATAAACATTAACGATATTCCTGTCAGAGAACTACGTGCTCGTTTAGCTGTTGTTCCTCAGAGTCCATTTCTGTTTGAAGGATCATTAAGGGATAATCTAGATCCATTCCGAATGCATGGTGACTTGAAAATTTGGAATGCCTTGGAGAAATGCCATGTGAAAGAGGAAGTAGAAGCAGCTGGAGGGTTGCATATGCTCGTAAAGGAATCTGGGTCATCGTTTTCTGTTGGCCAAAGGCAACTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAGTGTACAGCCAATGTGGACACACAAACTGCTTCACTGCTGCAAAGTACCATATGTGATGAATGCAAGGGCATGACAGTAATTACAATTGCTCACCGGATCTCGACAGTTTTAAATATGGACAACATTTTAATCCTTGACCATGGGGACCTGGCTGAACAAGGAAATCCACAGGTTCTTATCAAACATGAATCCTTATTCTCCAGTTTTGCCAAAGCTTCATCAATGTGA 4197 0.4029 MALGFGLNAVTIVITVVIGFTNKSSRGIQRSDSQMALSKKLFFHLVPAVGACGSLLDMIFLWRREINRHFVGYHKWFYSCSELMVWTNIILFSRCVSSHYMLCNYVLCYWWILKPLFWIFHLLTKFPLLETPICVVESSILLLNITFGIAINVIRVKTLSSKNSSFEDPLLSNDMDLEEGSHCDPEEKTRNFCDLMTFKFINPVMNHGVVKQLDFDDLLQLPRDLDPSSCHDIILTCWQAQLRNNGSNPSLLRAVCCAYGWPYLRLGLLKVVNDCLGFAGPLLLNKLIRFLQQGTESFDGYLFAMSLGLTSVIKSFLDTQYSFHLSKLKLKLRSSIMTLIYHKSVQNSLMEKFRHLCLLMLTELSTCVIVSMICGVNKWISKLIADATEKMMKQKDERIRRTGELLTYIRTLKMHGWELLFSDWLMETRSSELKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGYQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAVVSSRRLSRFLSCPENKSKVKEINSCSLPFHNEQPDSLQGLAVFVHDACFTWSSSDEETLNLVLNHVSLSLSRGSFVAVIGEVGSGKSSLLYSILGETRLAHGSINSDRSVAYVPQVPWILSGTIRDNIIFGKNYDPQRYAETVRACALDVDISLMVGGDMAYIGEKGVNLSGGQRTRLALARALYHGCDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRLLCTHNIQAISSADMVVIMDKGNIKWVGSPNDLQVSSYITFSPLNELDSDVRNQGKSCCTNSSSKLKELSDREIKHVVEGTEENIEAELRKEGKVELGVYKNYAMFTGWFITVVICLSAVLMQASRNGNDLWLSFWVDTTESRQTRYSLSFYLAILGLFCIINSLLTLVRAFSFAFGGLQAATKVHNRMLGDLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVVSYVQVFFLILLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDLFFAKFTEHVTLYQKTSYTETAASLWLSLRLQLLAAFIISFIALMAVVGAHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSVTETEKEMVSVERVLEYMDIPQEEIAGRLTLNPDWPNQGVIEFQNVTLKYKPSLPPALSNLSFTIGGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSIFIDGININDIPVRELRARLAVVPQSPFLFEGSLRDNLDPFRMHGDLKIWNALEKCHVKEEVEAAGGLHMLVKESGSSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTICDECKGMTVITIAHRISTVLNMDNILILDHGDLAEQGNPQVLIKHESLFSSFAKASSM 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci997g0001 1398 SUPERFAMILY ABC transporter transmembrane region 837 1144 IPR036640 GO:0005524|GO:0016020
Prci997g0001 1398 FunFam ABC transporter C family member 5 806 1145 - -
Prci997g0001 1398 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 364 503 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0001 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1156 1393 IPR027417 -
Prci997g0001 1398 Gene3D ABC transporter type 1, transmembrane domain 357 522 IPR036640 GO:0005524|GO:0016020
Prci997g0001 1398 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 188 1395 - -
Prci997g0001 1398 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1162 1395 IPR003439 GO:0005524
Prci997g0001 1398 Pfam ABC transporter transmembrane region 365 491 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0001 1398 Pfam ABC transporter transmembrane region 842 1089 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0001 1398 SMART AAA_5 1188 1372 IPR003593 GO:0016887
Prci997g0001 1398 SMART AAA_5 577 751 IPR003593 GO:0016887
Prci997g0001 1398 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 841 1127 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci997g0001 1398 FunFam ATP-binding cassette (ABC) transporter, putative 1149 1395 - -
Prci997g0001 1398 FunFam ABC transporter C family member 13 528 783 - -
Prci997g0001 1398 ProSitePatterns ABC transporters family signature. 1298 1312 IPR017871 GO:0005524|GO:0016887
Prci997g0001 1398 SUPERFAMILY ABC transporter transmembrane region 257 519 IPR036640 GO:0005524|GO:0016020
Prci997g0001 1398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 546 763 IPR027417 -
Prci997g0001 1398 Pfam ABC transporter 568 700 IPR003439 GO:0005524
Prci997g0001 1398 CDD ABCC_MRP_domain2 1160 1379 - -
Prci997g0001 1398 Gene3D ABC transporter type 1, transmembrane domain 254 351 IPR036640 GO:0005524|GO:0016020
Prci997g0001 1398 Gene3D - 523 785 IPR027417 -
Prci997g0001 1398 ProSitePatterns ABC transporters family signature. 675 689 IPR017871 GO:0005524|GO:0016887
Prci997g0001 1398 CDD ABCC_MRP_domain1 549 750 - -
Prci997g0001 1398 Pfam ABC transporter 1179 1326 IPR003439 GO:0005524
Prci997g0001 1398 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 547 774 IPR003439 GO:0005524
Prci997g0001 1398 CDD ABC_6TM_MRP7_D2_like 840 1139 - -
Prci997g0001 1398 Gene3D - 1147 1393 IPR027417 -
Prci997g0001 1398 Gene3D ABC transporter type 1, transmembrane domain 806 1145 IPR036640 GO:0005524|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci997g0001 539 796 Calmodulin-binding Proteins AT2G36910 28.000 4.90e-21 98.6