Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci980g0001 | ATGATAATTCCCGAGAAGAACCGTCGAGAGATATGCAAATACCTCTTCAAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATATGCCAAAACATCCTGAGATTGATGTACCGAATCTACAGGTGATTAAGTTGATGCAGAGCTTCAAGTCGAAGGAGTATGTCCGCGAGACCTTCGCTTGGATGCACTATTACTGGTATCTCACCAATGATGGCATCGAGTTCCTTAGAACCTACCTCAATCTCCCTTCTGAGATCGTCCCGGCTACTTTGAAGAAACAAGCTAAGCCTGTTGGTAGGCCTTTCGGCGGCCCACCTGGCGATCGCCCTCGGGGTCCACCTAGATTCGAAGGAGAACGGAGATTTGGTGACCGTGATGGCTACCGTGGAGGTCCCCGAGGTCCTGGTGGTGACTTTGGTGACAAGGGTGGTGCACCTGCTGATTACAGACCCTCTTTTGGGGGTTCTGGTGGCAGAACTAGTTTTGGACGTGGTGCTGGAGGTTACGGAGCTCCAAATAGTTCAGATCTTTCCTAA | 537 | 0.5009 | MIIPEKNRREICKYLFKEGVCYAKKDFNMPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPVGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGSGGRTSFGRGAGGYGAPNSSDLS | 178 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci980g0001 | 178 | MobiDBLite | consensus disorder prediction | 112 | 128 | - | - | |
| Prci980g0001 | 178 | Pfam | Plectin/S10 domain | 3 | 94 | IPR005326 | - | |
| Prci980g0001 | 178 | MobiDBLite | consensus disorder prediction | 93 | 178 | - | - | |
| Prci980g0001 | 178 | FunFam | 40S ribosomal protein S10 | 1 | 104 | - | - | |
| Prci980g0001 | 178 | Gene3D | - | 1 | 104 | IPR036388 | - | |
| Prci980g0001 | 178 | PANTHER | 40S RIBOSOMAL PROTEIN S10 | 1 | 174 | IPR037447 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci980g0001 | 1 | 177 | Cytoplasmic Ribosomal Protein Gene Family | AT5G52650 | 75.843 | 8.98e-77 | 225 |