Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci980g0001 ATGATAATTCCCGAGAAGAACCGTCGAGAGATATGCAAATACCTCTTCAAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATATGCCAAAACATCCTGAGATTGATGTACCGAATCTACAGGTGATTAAGTTGATGCAGAGCTTCAAGTCGAAGGAGTATGTCCGCGAGACCTTCGCTTGGATGCACTATTACTGGTATCTCACCAATGATGGCATCGAGTTCCTTAGAACCTACCTCAATCTCCCTTCTGAGATCGTCCCGGCTACTTTGAAGAAACAAGCTAAGCCTGTTGGTAGGCCTTTCGGCGGCCCACCTGGCGATCGCCCTCGGGGTCCACCTAGATTCGAAGGAGAACGGAGATTTGGTGACCGTGATGGCTACCGTGGAGGTCCCCGAGGTCCTGGTGGTGACTTTGGTGACAAGGGTGGTGCACCTGCTGATTACAGACCCTCTTTTGGGGGTTCTGGTGGCAGAACTAGTTTTGGACGTGGTGCTGGAGGTTACGGAGCTCCAAATAGTTCAGATCTTTCCTAA 537 0.5009 MIIPEKNRREICKYLFKEGVCYAKKDFNMPKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQAKPVGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGSGGRTSFGRGAGGYGAPNSSDLS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci980g0001 178 MobiDBLite consensus disorder prediction 112 128 - -
Prci980g0001 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
Prci980g0001 178 MobiDBLite consensus disorder prediction 93 178 - -
Prci980g0001 178 FunFam 40S ribosomal protein S10 1 104 - -
Prci980g0001 178 Gene3D - 1 104 IPR036388 -
Prci980g0001 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 174 IPR037447 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci980g0001 1 177 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.843 8.98e-77 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci980g0001 K02947 K09422 mnt:21406970 224.942