Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci971g0001 ATGACAATGGAGGCGTTGCAGGGAGAGGTGGATCGAGTCAAGGGTCCCTGGAGCCCTGAGGAGGACGAGTTGTTGAGGCAGCACGTGCGACGGCACGGCGCTCGAAATTGGTCGGCCATAAGCAAGGCGATCGCCGGACGATCTGGAAAGTCATGCCGGCTACGGTGGTGCAATCAGCTCTCACCGGATGTAGAGCGTGGCGCCTTCACTCCGGAGGAGGACGAGATCATCATCAAGGCACACGCCCAGTTCGGCAACAAATGGGCCGCCATAGCCAAGCTCCTCAACGGCCGTACGGATAACTCTGTCAAAAATCACTGGAACTCCACCTTAAAGCGCAAGTACTCATCACTGGTTCGTGACGTCGAAGATCCATCGCTCCAACTACCAACGAAGAAGCAGGCTACCGAAGATCGATCGCTGACGATTCCTTCCGTATTAGCGGGTCATTGTTACAGCCCGGGCAGCCAAACTGGATCTGATGTTAGTGACTCCGGTCATCAGGCAGTCTCTAATTCTCCGACTGTGATTCGGCCTGAATCGAGACCGCCGGACGCGAACCTGAACAACGATCTCTCAACAGAACTCACTCTGTCTCTTCCTGGAGCCAAGTCGAAGGAGTTAGGGAGGCTTAAAGATTCTAGCTCTATTACAGAGCATGAGGAAGCATTATCAACGTCGATATTATTATCAACGGAGAAGAAGCAGGGTGGAATCACGACTTTTGGGCCAGAGTTGCTGGCAGTGATGAAGGAGATGATAAGGGATGAGGTGAGAAATTACATGGCGGCGTTGTGA 798 0.5326 MTMEALQGEVDRVKGPWSPEEDELLRQHVRRHGARNWSAISKAIAGRSGKSCRLRWCNQLSPDVERGAFTPEEDEIIIKAHAQFGNKWAAIAKLLNGRTDNSVKNHWNSTLKRKYSSLVRDVEDPSLQLPTKKQATEDRSLTIPSVLAGHCYSPGSQTGSDVSDSGHQAVSNSPTVIRPESRPPDANLNNDLSTELTLSLPGAKSKELGRLKDSSSITEHEEALSTSILLSTEKKQGGITTFGPELLAVMKEMIRDEVRNYMAAL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci971g0001 265 Gene3D - 67 141 - -
Prci971g0001 265 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Prci971g0001 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Prci971g0001 265 FunFam Transcription factor MYB44 68 114 - -
Prci971g0001 265 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 14 217 - -
Prci971g0001 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 60 IPR017930 -
Prci971g0001 265 CDD SANT 68 111 IPR001005 -
Prci971g0001 265 FunFam MYB transcription factor 14 65 - -
Prci971g0001 265 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Prci971g0001 265 MobiDBLite consensus disorder prediction 152 192 - -
Prci971g0001 265 Pfam Myb-like DNA-binding domain 17 74 - -
Prci971g0001 265 Gene3D - 13 65 - -
Prci971g0001 265 MobiDBLite consensus disorder prediction 152 178 - -
Prci971g0001 265 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Prci971g0001 265 SMART sant 65 113 IPR001005 -
Prci971g0001 265 SMART sant 13 62 IPR001005 -
Prci971g0001 265 CDD SANT 16 58 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci971g0001 11 265 MYB Transcription Factor Family AT5G67300 48.201 4.42e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci971g0001 Myb_DNA-bind_6 2.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci971g0001 K09422 - jre:108996080 263.077