Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci949g0002 ATGGATGAAATTGGAAACAAAATCACTGAGTTGTTTAATGGCCAAGCCCTATTGTACAAGGTCATGTATCTTTGGATACCTTCTTTATCTCTCAAGTGTGCCATTGATCTTGAAATACCAGACATAATCCACAAGCATGGCCAACCCCTCCCTCTTTCTCAGTTGGTGTCAGCTCTCAATATTCCACCCTCTAAAGCCACCTTTGTGAAAGGGCTCATGCGCTTGCTGGCCCTCAATGGCATCTTCACTATCATCAAAAGCAGCAACAATGAAGAAGAAGAGAGTGATGAAGCATATGATCTCACTTCTGCATCACAGCTTCTTGTGAATGACACAGACCATTGTTTATCTCCAATGGTTGGGCTGGCAGTAAAGCCACCAATGATTGAATTGTATCATCACTTGAAGAAATGGGCTCGTCGAGAGGAAAACACACTGGACGAGGCAATATTTGGTGTAAGGCCTTATGACTTGATGAAGCAAAAGCCAGAAGATTTTGCATTTATGCAAGAAGCAATGGCTAGTGATTCTAGATTCATGAAACTGGCACTGACCAAAAACTTAGAATCTGTTTTTGATGGATTGGGTTCTATTGTTGATGTTGGTGGTGGAGATGGGACCACTGCTAAGACTATTTGTGAAGCGTTCCCAAAGTTGAAATGCATAGTACTTGATCTTCCTGAGGTTGTTTCAAACTTATCTGGAACCACCAATTTAAGTTTTGTTGGTGGAAACATGCTCAATTTCATTCCCCATGCTGATGCAGTTTTGATTAAGTGGGTCTTACTTGACTGGGGTGATGATGATATCATAAAGATACTTAAAAATGCCAAGGACGCTATCTCAAGCAAAGGAAATGAAGGAAAAGTGATCGTCATAGATATGGTGTTGGATGAAAAGCATGACCAGCATGAATGGCTAGAAACAAAGCTCTTGCTCAATCTAATTTTGACGGCTCAGCTTAATTCAAAAGCAAGATCTGAAAAAGAATGGAAGCAACTATTCCTGAGGGCAGGCTTCAAGGATTACAAGATATTTCCTATATTTGGCCTTAGGTCTCTTATTATGCTTTATCCTTAA 1080 0.4046 MDEIGNKITELFNGQALLYKVMYLWIPSLSLKCAIDLEIPDIIHKHGQPLPLSQLVSALNIPPSKATFVKGLMRLLALNGIFTIIKSSNNEEEESDEAYDLTSASQLLVNDTDHCLSPMVGLAVKPPMIELYHHLKKWARREENTLDEAIFGVRPYDLMKQKPEDFAFMQEAMASDSRFMKLALTKNLESVFDGLGSIVDVGGGDGTTAKTICEAFPKLKCIVLDLPEVVSNLSGTTNLSFVGGNMLNFIPHADAVLIKWVLLDWGDDDIIKILKNAKDAISSKGNEGKVIVIDMVLDEKHDQHEWLETKLLLNLILTAQLNSKARSEKEWKQLFLRAGFKDYKIFPIFGLRSLIMLYP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci949g0002 359 PIRSF O-mtase 2 359 IPR016461 GO:0008168
Prci949g0002 359 PANTHER O-METHYLTRANSFERASE 28 344 IPR016461 GO:0008168
Prci949g0002 359 FunFam O-methyltransferase ZRP4 110 359 - -
Prci949g0002 359 FunFam Coniferyl alcohol 9-O-methyltransferase 3 108 - -
Prci949g0002 359 Gene3D - 3 108 IPR036388 -
Prci949g0002 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 356 IPR029063 -
Prci949g0002 359 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
Prci949g0002 359 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Prci949g0002 359 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
Prci949g0002 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 359 IPR016461 GO:0008168
Prci949g0002 359 Pfam O-methyltransferase domain 132 341 IPR001077 GO:0008171
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci949g0002 29 345 Monolignol Biosynthesis Gene Families AT5G54160 28.571 1.16e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci949g0002 - K22588 gmx:100818947 374.785