Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci918g0002 ATGGCTCGGTCTGCGAGAGGTCAGCAACAAGAATTGGAAGAAGACGACGACGAAGATCACCTGACCAGAAATGGTTCTTCTTCACTCAAAGTGAAGGTGGATGAAGCGACTAGAGAGCAGCGGGTTAACGCACATCGTTCCAAGCATTCAGAAACTGAGCAGCGAAGGAGGAGCAAGATAAATGAAAGATTTCAGATCCTGAGAGATCTCATTCCTCAAAATGATCAGAAAAGGGATAAGGCTTCTTTCTTGCTGGAGGTTATTGAGTATATTCAATTTTTACAGGAGAAATTACAAATGTATGAGCAATCTTACCAAGGGTGGAATCAGGAGCCAATGAAATTAATTCCCTGGAGAAATCATCGTGGACCTACAGAAAATGTCACATCTCAGGCTATGCAAAATGGTTCTGGTCATGAGAACAATGATCTCTCTCCATCGCTGCCCTTAAATGCACAGAATGCAATTGAATCTGACTTGTCACCGACAATTATTCAGAAGGCTGCCCCCCCTGGTTTAGCTTCTGAAGCAGTTCCCTTGGGTATGCAAATGCGGTTGGACATGTTTGATGCGGCTGTGAGCAGTGGCATTCCAACCCAGCATTTTCATGAAGCAATATCTAACTCTGAGAACACGCCTTCCCATACTCAGCCTCAGGTGTGTCTTGGGGGACCTGAGGAGGGTGCATATGATTTTCCAAATAATACATTGAAGGAACAGGATGAGCTAGCATTTGAAAGTGAGTCAGTCAGCATCTCAAGAGCCTATTCTCAGGGAATATTGGATACTTTTGTGCACGCACTGCGGTCTTCAGGTGTGGATTTATCTGAGGCCAACGTTTCAGTACAAATTGATCTAGGGAGACGATCAATTGCCTCCACATCTAGCTCAAAGGATCATGAGAACCAATTTGTGAACAATCCGGCAGTGCCATGTTCAGGAGTTGACTACTGCAGTGAGGATTCTGAACAAGCTCTTAAGAGGCTCAGAACTGAAGCGATCTCCTGA 1008 0.4484 MARSARGQQQELEEDDDEDHLTRNGSSSLKVKVDEATREQRVNAHRSKHSETEQRRRSKINERFQILRDLIPQNDQKRDKASFLLEVIEYIQFLQEKLQMYEQSYQGWNQEPMKLIPWRNHRGPTENVTSQAMQNGSGHENNDLSPSLPLNAQNAIESDLSPTIIQKAAPPGLASEAVPLGMQMRLDMFDAAVSSGIPTQHFHEAISNSENTPSHTQPQVCLGGPEEGAYDFPNNTLKEQDELAFESESVSISRAYSQGILDTFVHALRSSGVDLSEANVSVQIDLGRRSIASTSSSKDHENQFVNNPAVPCSGVDYCSEDSEQALKRLRTEAIS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci918g0002 335 CDD bHLH_AtBIM_like 43 119 - -
Prci918g0002 335 Gene3D - 42 115 IPR036638 GO:0046983
Prci918g0002 335 Coils Coil 319 335 - -
Prci918g0002 335 Pfam Helix-loop-helix DNA-binding domain 46 95 IPR011598 GO:0046983
Prci918g0002 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 122 IPR036638 GO:0046983
Prci918g0002 335 MobiDBLite consensus disorder prediction 32 57 - -
Prci918g0002 335 FunFam BHLH domain class transcription factor 42 114 - -
Prci918g0002 335 SMART finulus 50 100 IPR011598 GO:0046983
Prci918g0002 335 Coils Coil 91 111 - -
Prci918g0002 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 94 IPR011598 GO:0046983
Prci918g0002 335 MobiDBLite consensus disorder prediction 125 147 - -
Prci918g0002 335 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 3 331 IPR044295 GO:0003700|GO:0006351|GO:0046983
Prci918g0002 335 MobiDBLite consensus disorder prediction 1 57 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci918g0002 3 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 40.404 2.27e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci918g0002 HLH 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci918g0002 - - gmx:100791730 423.705