Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci913g0001 ATGGAAATTCACTTCCAGCAACCAAAGCAGCATGAGAAAGCAGCAGTTGTTCCAATCAGCAGAGGAGGCAAATTCAAAGGAAGGAACAAGAACAATGGCACAAACAAATTTGTAGGGGTGAGACAAAGACCTTCTGGAAGATGGGTGGCTGAGATCAAAGACACAACCCAGAAGATAAGAATGTGGCTTGGCACATTTGAGACTGCAGAAGAAGCAGCCAGGGCTTATGATGAAGCTGCCTGCCTTCTTCGAGGATCCAACACTCGCACCAACTTCATCACCCGTGTCTCCACAGATTCACCTCTCGCTTCTCGTATTCGAAATCTGCTTAAGAACAGAAAAGGAACCAAGGAACAAGATGTGGATGCTTCTTCCTCAAGAGTCAGCGCCATTAGCTCTACTAGTACAAGTACTACTGGGAGCTCAGACTTGAGCAATGGTGACAAAAGTGAGAGCACTCTTTCTAGTGGGAAAATTCAGAACACAGAGTTATTTGGTGATGGTTATAGACCAGATTTGAGCAGTTGCAGGGAAGGTCTTGATCTAGGTTCCCAATCTAATCCTTCATGGGCACTTGGACCTTTCGTTGATCTTTTTCCTTTTGCTCAAGTATTGGACGTGCCAAAGCCTGATGGTATCGCTGATACAGCTGGTACAGTTGAGTTAGAGCTTTCAGAATTTGAGACGATGAAATTTGAAAGGCAAATATCAGCCTCTCTCTATGCAATTAATGGAGTGCACGAGTACATGGAGACTGTCCAGGACTCTAATGAAGAATCTCTCTGGGATCTCCCACCCTTATGGTCAATGTTCTGCTAA 819 0.4481 MEIHFQQPKQHEKAAVVPISRGGKFKGRNKNNGTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITRVSTDSPLASRIRNLLKNRKGTKEQDVDASSSRVSAISSTSTSTTGSSDLSNGDKSESTLSSGKIQNTELFGDGYRPDLSSCREGLDLGSQSNPSWALGPFVDLFPFAQVLDVPKPDGIADTAGTVELELSEFETMKFERQISASLYAINGVHEYMETVQDSNEESLWDLPPLWSMFC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci913g0001 272 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Prci913g0001 272 MobiDBLite consensus disorder prediction 122 157 - -
Prci913g0001 272 MobiDBLite consensus disorder prediction 109 157 - -
Prci913g0001 272 SUPERFAMILY DNA-binding domain 36 93 IPR016177 GO:0003677
Prci913g0001 272 Gene3D AP2/ERF domain 35 95 IPR036955 GO:0003700|GO:0006355
Prci913g0001 272 FunFam ethylene-responsive transcription factor RAP2-11 35 94 - -
Prci913g0001 272 Pfam AP2 domain 36 85 IPR001471 GO:0003700|GO:0006355
Prci913g0001 272 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 28 171 - -
Prci913g0001 272 CDD AP2 36 92 IPR001471 GO:0003700|GO:0006355
Prci913g0001 272 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Prci913g0001 272 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Prci913g0001 272 SMART rav1_2 36 99 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci913g0001 24 272 AP2-EREBP Transcription Factor Family AT5G19790 42.802 2.48e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci913g0001 AP2 6e-14 CL0081