Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci900g0010 ATGGAAGCAGTTGTATATTTGCAGAGGAATGCCTGGGAGTCTGTCTCGCTTCAGCTCATGCAGCTTCCCTGTTTGTTGGAATACCTATTTCAAGATGATCTTGAACAAGCAAAAATCCCCGTGACTAACAGTGACAACGGGATCAAAGTAAAATACAACATTGATGGAGTACAAATACCCGAGCCTAGCAGCACCAAAATGGCTCAGAAGAATGAAACAGGGAAGACTGGGAAGTTCTTGAGAGGCAGAGTATTGTCAAGGGTATTCTCAGAGGATTACGAAAGAGTGAAAAGAAAAATACTAGATCCTCGAGGACAAACCATTCACCGATGGAACAAGATTTTCTTGGTGGCATGTTTAATATCTTTGTTTGTGGACCCCCTCTTCTTTTACTTGCCAGTAGTTCAAGATGAAGTGTGCATTGAGATTGGAATAACACCTGAAGTTATCCTCACAGTCATTAGAACAGTTGCAGATTTCTTTTACATGTTTCAGATTTTCATGAAGTTTCGTACAGCTTATGTTGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATCGATTCTTCTAAGATTGCATTTAGGTACTTCAGGAAGAGTTTCTGGTTAGACTTTGTTGCTGCTCTGCCTCTTCCACAGGTGTTAATTTGGCTTGTCATCCCCTTCCTCAGGGGTTCTACCATGGCAAATACAAAAAATGTTCTTCGATTCATCATCATCTTTCAGTATCTCCCTAGGCTGTTTCTCATTTTCCCACTTTCATCACAAATTATAAAGGCTACTGGAGTTGTAACGGAAACAGCATGGGCTGGTGCTGCTTACAACCTGATGCTTTACATGTTGGCAAGCCATGGTTTAGGTGCTATGTGGTATCTTCTATCAATTGAGCGACAGGAAGCATGCTGGAGAAGTGTTTGTGATCAGGAGAAGTCATATTGTCAATATGGATATTTTGACTGCCACAGGGTCAACGAAGCCAGTAGGGTCGCCTGGTTTATTGCAAGCAATGTCACAAATTTATGCTCACCTGATGTCAACTTTTATCCATTTGGCATATATGGTGATGCGGTGACTTCTGAAGTCACAAGCTCACCATTCTTTAACAAGTATTTCTACTGTCTTTGGTGGGGCTTAAGAAATCTGAGTTCTTTAGGACAGGATCTTCTCACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTGTAGTTGCAACCCTTGGATTGGTTCTTTTTGCCTTGCTTATTGGTAATATGCAGACATACCTTCAATCAACAACCGTCCGCTTAGAAGAGTGGAGGGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGACAGCTACCTTCGGAACTAAGACTAGCCGTAAGGAAGTATGATCAATATAAATGGTTGGCCACCCGAGGAGTTGATGAAGAGGCTCTTCTCAAAGGACTTCCAGTGGATCTTCGAAGAGACATCAAGCGCCACCTTTGCCTCGACCTTGTCCGAGGAGTCCCATTATTTGACCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTGCATTGTGCACCGAGGGCACCTATCTTGTTCGCGAGGGCGATCCAGTGGATGAAATGCTCTTCATAATAAGAGGCCATCTGGATTCCTACACCACCAACGGCGGCCGAACCGGGTTCTTCAATTCATGCCGGATTGGTCCGGGCGATTTCTGCGGCGAGGAAATACTGACATGGGCATTGGACCCTCGACCGAGTGTCATACTTCCATCTTCCACTAGAACAGTGAAGGCCATCTCCGAAGTAGAAGCTTTTGCGCTTATGTCAGAGGACCTCAAGTTTGTAGCGTCTCAGTTCAGAAGGCTGCACAGTAAACAGCTGAGGCACAAGTTCAAGTTTTACTCGCACCAGTGGCGAACATGGGCTGCATGTTTCGTCCAAGCTGCATGGAGGAGGTATAAGAAGAGGAAGGAACTTGCTGGACTGAGGGCTAAAATGAACCAAACTGATGATGCTGAGCCTGAAACACCAAATTCTGGCTCGTCAGGCTTAGTCGCATATGGATCGAGTAAGGGTAGGAGCACCGGAAAAGGGGTTAATATGTGTTCTGAGGCAGCTTCTGGGGTTGTAAGCTCTCTGCAGAAGCCTGAAGAACCAGACTTTACTGTTGATGAGTAA 2178 0.4454 MEAVVYLQRNAWESVSLQLMQLPCLLEYLFQDDLEQAKIPVTNSDNGIKVKYNIDGVQIPEPSSTKMAQKNETGKTGKFLRGRVLSRVFSEDYERVKRKILDPRGQTIHRWNKIFLVACLISLFVDPLFFYLPVVQDEVCIEIGITPEVILTVIRTVADFFYMFQIFMKFRTAYVAPSSRVFGRGELVIDSSKIAFRYFRKSFWLDFVAALPLPQVLIWLVIPFLRGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIIKATGVVTETAWAGAAYNLMLYMLASHGLGAMWYLLSIERQEACWRSVCDQEKSYCQYGYFDCHRVNEASRVAWFIASNVTNLCSPDVNFYPFGIYGDAVTSEVTSSPFFNKYFYCLWWGLRNLSSLGQDLLTSTFVGEIMFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPSELRLAVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVDEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEEILTWALDPRPSVILPSSTRTVKAISEVEAFALMSEDLKFVASQFRRLHSKQLRHKFKFYSHQWRTWAACFVQAAWRRYKKRKELAGLRAKMNQTDDAEPETPNSGSSGLVAYGSSKGRSTGKGVNMCSEAASGVVSSLQKPEEPDFTVDE 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci900g0010 725 Gene3D Helix hairpin bin 431 494 - -
Prci900g0010 725 Pfam Ion transport protein 111 430 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci900g0010 725 FunFam Cyclic nucleotide-gated ion channel 1 430 494 - -
Prci900g0010 725 MobiDBLite consensus disorder prediction 664 699 - -
Prci900g0010 725 SUPERFAMILY cAMP-binding domain-like 433 628 IPR018490 -
Prci900g0010 725 CDD CAP_ED 503 634 IPR000595 -
Prci900g0010 725 ProSiteProfiles cAMP/cGMP binding motif profile. 503 600 IPR000595 -
Prci900g0010 725 SMART cnmp_10 503 634 IPR000595 -
Prci900g0010 725 Pfam Cyclic nucleotide-binding domain 526 613 IPR000595 -
Prci900g0010 725 Gene3D - 115 427 - -
Prci900g0010 725 PRINTS EAG/ELK/ERG potassium channel family signature 372 389 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0010 725 PRINTS EAG/ELK/ERG potassium channel family signature 283 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0010 725 PRINTS EAG/ELK/ERG potassium channel family signature 466 473 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0010 725 PRINTS EAG/ELK/ERG potassium channel family signature 166 175 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0010 725 PRINTS EAG/ELK/ERG potassium channel family signature 398 409 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0010 725 PRINTS EAG/ELK/ERG potassium channel family signature 416 425 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0010 725 FunFam Cyclic nucleotide-gated ion channel 1 501 619 - -
Prci900g0010 725 ProSiteProfiles IQ motif profile. 639 668 IPR000048 GO:0005515
Prci900g0010 725 MobiDBLite consensus disorder prediction 671 699 - -
Prci900g0010 725 Gene3D Jelly Rolls 501 621 IPR014710 -
Prci900g0010 725 SUPERFAMILY Voltage-gated potassium channels 102 425 - -
Prci900g0010 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 92 721 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci900g0010 77 724 Ion Channels AT2G28260 75.772 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci900g0010 K05391 - gmx:100811847 1153.27