Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci900g0009 ATGGGCTTTGGAAATACAAGATCCGTAAGATTTCAAGATGATCTTGAACAAGCAAAAATCCCCGTGACTAACAGTGACAACGGGATCAAAGTAAAATACAACATTGATGGAGTACAAATACCCGAGCCTAGCAGCACCAAAATGGCTCAGAAGAATGAAACAGGGAAGACTGGGAAGTTCTTGAGAGGCAGAGTATTGTCAAGGGTATTCTCAGAGGATTACGAAAGAGTGAAAAGAAAAATACTAGATCCTCGAGGACAAACCATTCACCGATGGAACAAGATTTTCTTGGTGGCATGTTTAATATCTTTGTTTGTGGACCCCCTCTTCTTTTACTTGCCAGTAGTTCAAGATGAAGTGTGCATTGAGATTGGAATAACACCTGAAGTTATCCTCACAGTCATTAGAACAGTTGCAGATTTCTTTTACATGTTTCAGATTTTCATGAAGTTTCGTACAGCTTATGTTGCGCCTTCCTCTCGAGTATTTGGGAGAGGAGAACTTGTTATCGATTCTTCTAAGATTGCATTTAGGTACTTCAGGAAGAGTTTCTGGTTAGACTTTGTTGCTGCTCTGCCTCTTCCACAGGTGTTAATTTGGCTTGTCATCCCCTTCCTCAGGGGTTCTACCATGGCAAATACAAAAAATGTTCTTCGATTCATCATCATCTTTCAGTATCTCCCTAGGCTGTTTCTCATTTTCCCACTTTCATCACAAATTATAAAGGCTACTGGAGTTGTAACGGAAACAGCATGGGCTGGTGCTGCTTACAACCTGATGCTTTACATGTTGGCAAGCCATGGTTTAGGTGCTATGTGGTATCTTCTATCAATTGAGCGACAGGAAGCATGCTGGAGAAGTGTTTGTGATCAGGAGAAGTCATATTGTCAATATGGATATTTTGACTGCCACAGGGTCAACGAAGCCAGTAGGGTCGCCTGGTTTATTGCAAGCAATGTCACAAATTTATGCTCACCTGATGTCAACTTTTATCCATTTGGCATATATGGTGATGCGGTGACTTCTGAAGTCACAAGCTCACCATTCTTTAACAAGTATTTCTACTGTCTTTGGTGGGGCTTAAGAAATCTGAGTTCTTTAGGACAGGATCTTCTCACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTGTAGTTGCAACCCTTGGATTGGTTCTTTTTGCCTTGCTTATTGGTAATATGCAGACATACCTTCAATCAACAACCGTCCGCTTAGAAGAGTGGAGGGTCAAAAGAACTGATACAGAACAATGGATGCATCACAGACAGCTACCTTCGGAACTAAGACTAGCCGTAAGGAAGTATGATCAATATAAATGGTTGGCCACCCGAGGAGTTGATGAAGAGGCTCTTCTCAAAGGACTTCCAGTGGATCTTCGAAGAGACATCAAGCGCCACCTTTGCCTCGACCTTGTCCGAGGAGTCCCATTATTTGACCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTGAAACCTGCATTGTGCACCGAGGGCACCTATCTTGTTCGCGAGGGCGATCCAGTGGATGAAATGCTCTTCATAATAAGAGGCCATCTGGATTCCTACACCACCAACGGCGGCCGAACCGGGTTCTTCAATTCATGCCGGATTGGTCCGGGCGATTTCTGCGGCGAGGAAATACTGACATGGGCATTGGACCCTCGACCGAGTGTCATACTTCCATCTTCCACTAGAACAGTGAAGGCCATCTCCGAAGTAGAAGCTTTTGCGCTTATGTCAGAGGACCTCAAGTTTGTAGCGTCTCAGTTCAGAAGGCTGCACAGTAAACAGCTGAGGCACAAGTTCAAGTTTTACTCGCACCAGTGGCGAACATGGGCTGCATGTTTCGTCCAAGCTGCATGGAGGAGGTATAAGAAGAGGAAGGAACTTGCTGGACTGAGGGCTAAAATGAACCAAACTGATGATGCTGAGCCTGAAACACCAAATTCTGGCTCGTCAGGCTTAGTCGCATATGGATCGAGTAAGGGTAGGAGCACCGGAAAAGGGGTTAATATGTGTTCTGAGGCAGCTTCTGGGGTTGTAAGCTCTCTGCAGAAGCCTGAAGAACCAGACTTTACTGTTGATGAGTAA 2121 0.4437 MGFGNTRSVRFQDDLEQAKIPVTNSDNGIKVKYNIDGVQIPEPSSTKMAQKNETGKTGKFLRGRVLSRVFSEDYERVKRKILDPRGQTIHRWNKIFLVACLISLFVDPLFFYLPVVQDEVCIEIGITPEVILTVIRTVADFFYMFQIFMKFRTAYVAPSSRVFGRGELVIDSSKIAFRYFRKSFWLDFVAALPLPQVLIWLVIPFLRGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIIKATGVVTETAWAGAAYNLMLYMLASHGLGAMWYLLSIERQEACWRSVCDQEKSYCQYGYFDCHRVNEASRVAWFIASNVTNLCSPDVNFYPFGIYGDAVTSEVTSSPFFNKYFYCLWWGLRNLSSLGQDLLTSTFVGEIMFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPSELRLAVRKYDQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLDLVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVDEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEEILTWALDPRPSVILPSSTRTVKAISEVEAFALMSEDLKFVASQFRRLHSKQLRHKFKFYSHQWRTWAACFVQAAWRRYKKRKELAGLRAKMNQTDDAEPETPNSGSSGLVAYGSSKGRSTGKGVNMCSEAASGVVSSLQKPEEPDFTVDE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci900g0009 706 CDD CAP_ED 484 615 IPR000595 -
Prci900g0009 706 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0009 706 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0009 706 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0009 706 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0009 706 PRINTS EAG/ELK/ERG potassium channel family signature 379 390 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0009 706 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci900g0009 706 SUPERFAMILY cAMP-binding domain-like 414 609 IPR018490 -
Prci900g0009 706 Pfam Cyclic nucleotide-binding domain 507 594 IPR000595 -
Prci900g0009 706 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Prci900g0009 706 ProSiteProfiles IQ motif profile. 620 649 IPR000048 GO:0005515
Prci900g0009 706 SMART cnmp_10 484 615 IPR000595 -
Prci900g0009 706 FunFam Cyclic nucleotide-gated ion channel 1 411 475 - -
Prci900g0009 706 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Prci900g0009 706 Gene3D Helix hairpin bin 411 475 - -
Prci900g0009 706 MobiDBLite consensus disorder prediction 645 680 - -
Prci900g0009 706 ProSiteProfiles cAMP/cGMP binding motif profile. 484 581 IPR000595 -
Prci900g0009 706 Gene3D - 95 408 - -
Prci900g0009 706 Gene3D Jelly Rolls 482 602 IPR014710 -
Prci900g0009 706 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 73 702 - -
Prci900g0009 706 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci900g0009 706 MobiDBLite consensus disorder prediction 652 680 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci900g0009 58 705 Ion Channels AT2G28260 75.772 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci900g0009 K05391 - gmx:100811847 1162.52