Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2505 ATGGTTTCGCTTCGTTCCCCAGTTTCTCCTCCTCCCTTTGTCTCTTCTTCTTGTTTCCTCAGCAGCTTCTTCTCTTTCTGTCGTGCCTCCAAACCCAGAAACAACTCGATAATCAAGCAGAAACGCCCTTCTGTCTTCAAAGCCTCGTGGCAAGAGCTTGCCGGAGTGTTACTGTTCTCGGCGATTCCTTTCAGTGCTGTAAAAGTTTTAGCTAATAGTCCACTAGGGAGCTCGCTTCAGAGGAAAATGCTGAAGAGAAAGAAAATTGCTCTTGATAACTCGTCCGTATACATGGCCTTAGCTCAGAAAGCCAGAAAAGAGAGCCTTTGGTATGGAGAAGATCGGCCCCATTGGCTTGGTCCTATTCCATATGATTATCCAGAATATCTTACTGGGGAACTTCCTGGGGATTACGGATTTGACATTGCAGGGCTTGGCAAGGATCCTGCAGCTTTGCAGAAATACTTCAACTTCGAGATATTGCATGCTCGTTGGGCTATGCTTGCATCTGTTGGTGTTCTGGTTCCTGAAATATTAGACCTATTTGGGGCCTTTCACTTTGTTGAACCTATCTGGTGGCGTGTTGGCTATTCAAAGCTCAAGGGAGATACTCTAGACTACCTTGGAATCCCGGGACTTCACTTAGCTGGAAGCCAAGGAGTGGTCGTGATTGCTATTTGCCAGGCACTCCTCATGGTTGGACCTGAATATGCTAGATATTGTGGGATTGAAGCATTGGAACCTCTAGGAATATATCTGCCTGGCGACATAAATTATCCAGGGGGAGGATTGTTTGATCCCTTGAACTTGTCCAAAGATCCTGAAGCTTTCGAGGAGCTGAAGGTTAAAGAAATTAAAAATGGACGCCTAGCAATGATTGCATGGTTAGGATTTTACACTCAAGCAGCTCTGACAGGTAAGGGTCCCGTGCAGAACCTTCTTGATCACATCTCTGATCCTTTCCACAATAATCTTCTGTCCGCGCTCAACTTGGTGAATTTAGTTAAGTGA 1011 0.456 MVSLRSPVSPPPFVSSSCFLSSFFSFCRASKPRNNSIIKQKRPSVFKASWQELAGVLLFSAIPFSAVKVLANSPLGSSLQRKMLKRKKIALDNSSVYMALAQKARKESLWYGEDRPHWLGPIPYDYPEYLTGELPGDYGFDIAGLGKDPAALQKYFNFEILHARWAMLASVGVLVPEILDLFGAFHFVEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGGLFDPLNLSKDPEAFEELKVKEIKNGRLAMIAWLGFYTQAALTGKGPVQNLLDHISDPFHNNLLSALNLVNLVK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2505 336 FunFam Chlorophyll a-b binding protein, chloroplastic 117 329 - -
Prci8g2505 336 SUPERFAMILY Chlorophyll a-b binding protein 109 329 - -
Prci8g2505 336 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Prci8g2505 336 Pfam Chlorophyll A-B binding protein 127 302 IPR022796 -
Prci8g2505 336 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 95 328 IPR001344 GO:0009765|GO:0016020
Prci8g2505 336 Gene3D Chlorophyll a/b binding protein domain 117 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2505 Prci-Chr8 35125149 35133849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2505 30 330 Chloroplast and Mitochondria Gene Families AT1G76570 74.751 1.62e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2505 K14172 - gmx:100786260 521.546