Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2470 ATGGCCACCTCTGCCATCCAACAATCAGCATTTGTCGGACAGACTGCATTGAAGCAGGCAAACGAGCTTGTCCGCAAGGCTGGTGCCTCCGGCAATGGCCGCTTCACCATGCGCCGCACCGTCAAGAGCGCTCCTCAGAGCATCTGGTACGGACCTGACCGTCCCAAGTACTTGGGTCCCTTCTCCGAGCAAATTCCATCGTACCTGACCGGTGAATTTCCCGGCGACTACGGGTGGGACACCGCCGGATTATCGGCAGACCCCGAGACCTTTGCGAGAAACCGTGAGCTGGAAGTGATTCACTGCAGATGGGCCATGCTCGGCGCTCTGGGATGCGTCTTCCCTGAAATCCTAGAGAAGAACGGCGTCAAGTTCGGCGAGGCAGTGTGGTTCAAGGCCGGCGCCCAGATCTTCTCCGAGGGCGGGCTCGATTATCTTGGCAACCCAAACCTCATCCACGCTCAGAGCATCCTCGCCATCTGGGCCTGTCAGGTGGTGCTCATGGGATTCGTTGAAGGGTACAGGGTTGGTGGAGGACCTCTCGGAGAAGGGCTTGACCCGATCTACCCAGGAGGTGCTTTTGACCCGCTTGGTCTGGCCGACGACCCGGATGCATTTGCAGAGTTGAAGGTGAAGGAAATCAAGAATGGGCGATTAGCAATGTTCTCCATGTTTGGATTCTTCGTTCAGGCCATCGTCACCGGCAAGGGTCCTATCCAAAACCTTTATGATCACGTTGCCGATCCTGTTGCCAACAACGCTTGGGCTTATGCCACTAACTTCGTCCCCGGACAATGA 798 0.5677 MATSAIQQSAFVGQTALKQANELVRKAGASGNGRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAYATNFVPGQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2470 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Prci8g2470 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
Prci8g2470 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Prci8g2470 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 264 IPR001344 GO:0009765|GO:0016020
Prci8g2470 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2470 Prci-Chr8 34834020 34835202 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2470 1 265 Chloroplast and Mitochondria Gene Families AT3G27690 87.218 8.58e-179 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2470 K08913 - cpap:110806542 524.628