Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2469 ATGTCGTCGCAGTCGAACGATTTTGTCGAAGGTGATGTAAATACTGAATTGGGTGCTTCCTTGATCGTCACTGGCAAGTACGGTCGGCTATGGCGGCGAAGTAGCTTATACATTCGAATCTTCATTTCTCTCACGAGAACAACAACTACAACTACCACAACACATGAATCTGAACAATCACCACATTATACCCCATTACCCACCTCACCATCACCTCCCACTAGAACTTCCTCGGCTAAATCTTCTATTGAGATTAACATTGCCTCTGATAACGAAGAGGATATTGCGTGCGTAGAACAGCGCATCAAGAACAGTATTGCTCGTATCGTGAAGGACAAGGACTTGGAATTGCTTCGTGAGCTCGGGGGAGTCAACCGTGTTCGCTCAGTTTTAATTCATCGTCAATCAGAGGAGGGCAATATTGATAATGGGAACCATCAAGTGTTGGAGACCACTGACCAAGTTCATGGAAGGAGGCTCTTGTACTGTTTTACGAATAGCTGCAAACGCAATAGTTACACTATTTCGTTACTCATGATCTCAGCCTTGTTGTCCTTGGCCACAGAGATCAAGCAGGAAGGACCTAAATATGGTTGGCATGATAGTGCTGCCATTGTTGTTGCCATAATTATGATTGTCGCTGTCTCTTCAGTGGCAAACTATGGGCGTGAAAGAAAGATGCTAAAATTATCGGAGAAGAAGGGCGAGTTGAAATTTACTGTTGTTAGATGTGAAACCTCCCAAATGGTGGCCATATCTGATATTATGGTTGGTGATATAGTGTGTCTTAAGCGAGGTGATGAGGCTCCGGCTGACGGTTTGCTTCTAAATAATGAACACTCTGTGCAGGATGAGATGTTGGACCCATTTCTCTTGTTTGGCTCCAAAGTATTTTATGGGGGTGAAACTTCGATGCTTGTAACATCAGTTAGAGACGAAAAATCAGTTGAGATGCAGAATTCAGCGGCAAATAGGCCTAAAAAGATTACGCTGTTGGAAAGTCGAATTGAGAAGCCGATTTCTATCATTGATAAAGTTGCCCTTCTTATCTCTACATTGGTTGCGCTTGTGGTGCTCATTCGCCTGCTTAGCAAGAAAAATGGGGACAATAACGGGTTACCAGAAATTAAGGGTAAGGTTTCTGTTGGCTTCCTGATAGAATTGATGGAGAGAATTTTCTTGAAACCGCAAGGAAAAGTTTCCATTTTAACTAGCCTTTTAACTGTTGCAATTATAAGCGTGCAACATGGGGTACCACTTATGGTTACACTTTCTCTCAAATACCAAATTGACAAGGTGGTATCAAATGAAGCTGCAGATCTTCATGATTTATCGTCATGTGCAACAATGGGGTTGGTTACAGTCATCTGCATCGATGCATCTGGTGGGCTAATGTCTAAATTGACGGAGGTTAGTAGAGTTAGGGTTGGAGAGAGAGATTTCAGTCGTGATGGGGCTTCAGAAATTAATGCCGTTGTCTGTGACATACTTCAGCAAGGAGCCAGCGTATCTGTTCTTGCTCCGGAATTTACTCTTTCTCCAGTGTCCAACTCACTTAGTTCTTGGGCAAAAAAAACTTGGGGCGTGAACAGTGAATCTTTTAGTCAGAACTTTACCATCCTTAAGCATAACAAACATAATTATAAGGAAGATGGAAGTGGAGTTTTGGTGAGCAAAATTGGAGACCAAGAACAAGTTCTGCACTTGCACTGGAGTGGGGCAGCACGTACAATACTGGAAATGTGTTCACACTACTATGATATTAATGGGGAATGCTGTGGCATAACAAATCAGAAAGTCCAATTTGAGGAGGTCATTAAAGAAATGGAGGATAGCGGTCTTGAGCCTATAGCGCTTGCTTATCAAAAGACAGAGGCTCAGGAACTTCAGCGAGGTGGACTAATCTTGCTAGCTCTGATAGGTCTTAAACACTCTTCATACCTTGAAGAGACAAAGTTGGCATTGGCAGACCTCAAAAATGATGGTGTCAAGATCAAATTGGTGTCAGAGCAAGACATCATGGCAGTGAGAGCCTTAGCTTGTGAACTAGGAATAGAAGTTCCCGTTGAAGATGGTGTTATTGTTGAAGGAAAAGAAATTCAAAATTTGAATAGCACAGCCAGGTTAAAGAAGTTGGATGAAGCACTGGTAATGGGAGGTTTCTTTCCTAATGACAAGGTTCTCATGATTCAGAGCCTGCAAGATGGAGGCCATGTGGTTGCATTCTTTGGAGCGTTGACAGTAAGTGATGCTGCAGTTCGAGAGGCGGCTGATATAGTCATAGATGATAAGTCTCAGAACCCAGAAGCTGATAGGGAGTGTTCTAATATATCTATCGAACGTTTCAATGCAATAACTATAACTAGGAAGTCTGGTAGATGTCAATATCTCAATACTCAAAAGTTCATTCAACTTCAGCTCACAGCTAGTTTATCCGGGTCATTCATAACCTTGATTGCAGCAATGTGCACTGGACAGTCCCCACTAACGCCCTTCCAATTGATTTGGGTGAACATGATAATGTGCCTTTTGGGAGGCCTGATGATGTTAATGGAGTTAAACATCAAGGAGGATCAGCATGCGAACCAACTAAATAACCGGAAGCAGTCACTCATAAGCCACGAAATCTGGATGGACATCGCAAGTCATGTACTGTATCAGGCTTTTGTTTCCATGATATTTCTTTTTGGAGGGCAAGTTACAGACAGCACAAAACAAGTTAGGACCACCATGATCTTCAACATATTCATGCTATGTCAGGTCTTCAATCAGCTCAACATCTTGGGCCTAATGAAGAAGGGAGTTTTCAAGATTGTTCTTAAGAGCTATTGTTTCTTGGTTACATTAGGAGTGAGTTTGGTTATGCAGGTTCTGGTGATTCAGTATGCAAGGAGCCTAGCAGATTACCTGAGGCTGAATGCAACTCAATGGGCTATCTGCATCGTAGTTAGTGCTCTTTCATGGGTAATTCAATGGCCATTGAAGATGATTCTTAATTGGATGTTTCATCATGCTCATTCTTTCCTCTGTACCATACAAATGTAG 3045 0.4227 MSSQSNDFVEGDVNTELGASLIVTGKYGRLWRRSSLYIRIFISLTRTTTTTTTTHESEQSPHYTPLPTSPSPPTRTSSAKSSIEINIASDNEEDIACVEQRIKNSIARIVKDKDLELLRELGGVNRVRSVLIHRQSEEGNIDNGNHQVLETTDQVHGRRLLYCFTNSCKRNSYTISLLMISALLSLATEIKQEGPKYGWHDSAAIVVAIIMIVAVSSVANYGRERKMLKLSEKKGELKFTVVRCETSQMVAISDIMVGDIVCLKRGDEAPADGLLLNNEHSVQDEMLDPFLLFGSKVFYGGETSMLVTSVRDEKSVEMQNSAANRPKKITLLESRIEKPISIIDKVALLISTLVALVVLIRLLSKKNGDNNGLPEIKGKVSVGFLIELMERIFLKPQGKVSILTSLLTVAIISVQHGVPLMVTLSLKYQIDKVVSNEAADLHDLSSCATMGLVTVICIDASGGLMSKLTEVSRVRVGERDFSRDGASEINAVVCDILQQGASVSVLAPEFTLSPVSNSLSSWAKKTWGVNSESFSQNFTILKHNKHNYKEDGSGVLVSKIGDQEQVLHLHWSGAARTILEMCSHYYDINGECCGITNQKVQFEEVIKEMEDSGLEPIALAYQKTEAQELQRGGLILLALIGLKHSSYLEETKLALADLKNDGVKIKLVSEQDIMAVRALACELGIEVPVEDGVIVEGKEIQNLNSTARLKKLDEALVMGGFFPNDKVLMIQSLQDGGHVVAFFGALTVSDAAVREAADIVIDDKSQNPEADRECSNISIERFNAITITRKSGRCQYLNTQKFIQLQLTASLSGSFITLIAAMCTGQSPLTPFQLIWVNMIMCLLGGLMMLMELNIKEDQHANQLNNRKQSLISHEIWMDIASHVLYQAFVSMIFLFGGQVTDSTKQVRTTMIFNIFMLCQVFNQLNILGLMKKGVFKIVLKSYCFLVTLGVSLVMQVLVIQYARSLADYLRLNATQWAICIVVSALSWVIQWPLKMILNWMFHHAHSFLCTIQM 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2469 1014 SUPERFAMILY HAD-like 645 765 IPR036412 -
Prci8g2469 1014 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 564 642 IPR023299 GO:0000166
Prci8g2469 1014 Gene3D - 224 278 - -
Prci8g2469 1014 Gene3D - 467 641 IPR023299 GO:0000166
Prci8g2469 1014 Gene3D - 778 1002 - -
Prci8g2469 1014 MobiDBLite consensus disorder prediction 49 64 - -
Prci8g2469 1014 SUPERFAMILY Calcium ATPase, transmembrane domain M 172 1002 IPR023298 -
Prci8g2469 1014 MobiDBLite consensus disorder prediction 49 81 - -
Prci8g2469 1014 Gene3D - 174 223 - -
Prci8g2469 1014 Gene3D - 301 466 - -
Prci8g2469 1014 PANTHER CATION TRANSPORTING ATPASE 103 997 - -
Prci8g2469 1014 Pfam Cation transporting ATPase, C-terminus 827 996 IPR006068 -
Prci8g2469 1014 SUPERFAMILY Calcium ATPase, transduction domain A 239 310 IPR008250 -
Prci8g2469 1014 Gene3D - 642 777 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2469 Prci-Chr8 34827791 34832415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2469 103 997 Primary Pumps ATPases AT3G63380 33.157 3.08e-130 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2469 K01537 - qsa:O6P43_020733 855.514