Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2463 ATGGAATACTCTCTCTCTCTCTCTCTCTCTCTTTTGGTGTCATGTTTTAGTTTACAAAGAATGTCTGTGAATCGGAAGCTCTCTGGGTTAAATGGCAGGATGCCACCGAGTTCCAAGTCGGGCAAGTCAAATGAAGCCTTGCATGAGTCTAATTCTTCGCTCAGGAAATGCAAGAAGAAGAAGCCCTTTTTCGTGTGGGTTTTTCTTGGTGTTGTTGCGGTGGGAATTGTGTGGTTCTTCTTCGTCAGTTCTCACAGTGACTCATGGATGTTGAGGAAGGACAAAAGGCTGGGTGATTGTGAAGAGAGAGCTCGAATCTTGCTACAACGTCACAATATCAGCAAAAAGCAACTTCGTGCTTTCGTTTCCTTGTTCTCTGCATCAGATCAGTCTATAATGCAGATGTTATCCCAATGTATTGGCGAAAGAAGAGTACAAAAGCTGTTAAGCAGTGACCTTGGCAGTACTCTGCAGATGGTATTTTCAGAGAATAAGGAGTTTCAAAAGGAGCATACAAGTGTCCCAGGCCAAGTTGAACTTATAGAACAATGCCCAGTTCTCAATGATTCTGTTCAGACAAACCTGAAATCATTACTGCTAGTGGAAAAAACTGTATCATTGGCCTCATACTCTGCTATCATGTCCAATTTGATCAATAATTTGTTTCTTGGAAAGGACATTGTGCAGTCATGGGTATTGGAGTTAGCTGCAATTCAAGGTTATCTGACTTTGTCTATAGGATGCTCGTGGATTCTTGTTGGAATTACAATTTGTTGCAGATTGGCTGGCTTTCCTTTATTTTGGAATCAGGAGCTGGTTTCACAGCCCAAAGCATTGCAACATTCTGCTGGGCAAAATTCAAAGGGTGCTGGGAGGTGGAGGAAAAAGTTTTTAGTTACATTTGTGTTACTTGGAATAGTTGTGTCCATTTGGTTGTTCTGGCACCTGAATAACGATATTATGCTGAGGAGAGAAGAAATGCTTATTAATATGTGTGATGAGCGAGCTCGCATGCTGCAGGATCAGTTCAATGTGAGCATGAACCACGTTCACGCTTTGGCTATTCTTGTGTCCACCTTTCACCATAGTAAACATCCATCTGCTATTGATCAGAAAACTTTTGGTGAATATACGGAGAGAACAGCATTTGAGAGGCCACTAACAAGTGGTGTTGCTTATGCTATGAAAGTTCTCCACTCTGATAGGGAGCATTTTGAAAAGCAGCATGGGTGGACAATTAAGAAAATGGAAACTGAGAATGAAACACTTGTCCAAGATTGTATTCCGGAAAATCTCAATCCTGCCCCCATTCAAGATGAATATGCTCCTGTGATATTTGCTCAAGAAACTGTTTCCCATATTGTATCGATTGACATGATGTCTGGAAAGGAAGACCGTGAGAATATCTTGCGAGCAAGAGCAACTGGAAAGGGAGTTCTAACATCTCCTTTCAAACTACTGAAGTCCAATCACCTGGGTGTTGTCCTTACATTTGCTGTCTACAATGCTAATTTTCCTCCTAATGCTACACCAGAGCAACGCATTGAAGCTACTGTTGGGTACTTGGGTGCTTCCTATGACGTTCCATCACTGGTGGACAAGCTCCTGCATCAACTTGCCAGCAAACAAACCATTGTTGTAAATGTTTATGATACAACAAATGCATTTGTGCCTATCACAATGTATGGTACTGATGTTGTTGATACTGGGTTACTACATATAAGCAACCTGGATTTTGGGGATCCTATGCGAAAACATGAGATGCATTGCAGGTTCAAACACAAGCCTCCATTACCTTGGACAGCAATCAATGCATCAGTTGGTGTACTTGTTATTACTTTGCTTCTTGGTCACATTTTTTATGCAGCAATCAGTCGAATAGCAAAAGTGGAGGATGACTATCGTCAAATGAGGGAGCTCAAGTTTCGAGCTGAAGCTGCAGATGTAGCAAAATCTCAGTTTCTGGCAACAGTTTCACATGAGATTAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGAACTAGATGAAAGCCAGATGGATTATGCTCAGACTGCTCACATGAGTGGTAAGGATCTCATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGAAAGCTTGAACTTGAAGCTGTAGAACTTGATCCACGTTCTATTCTAGATGAGGTTCTTTCACTTTTCTCTGGAAAATCTAATGAAAAAGGAATTGAGTTGGCTGCTTATGTATCCAACCAGGTGCCAGAAGTTGTCATTGGTGATCCTAAACGATTCCGGCAAATAATAACTAATCTTGTTGGGAATTCACTTAAGTTCACTCATGATAAAGGACATGTATTTGTATCGGTTCATCTGGCAAATGAAGTAAAGAGCCCACCTCACATTATGGATGTAGTTCTGAGTCAAGGGTTCCAGGACATGTCAGACAGAACCTATAATACATTGAGTGGGTTTCCTGTTGTTAATAGATGGAAAAGCTGGGCAAATTTCAAAAAGTTAAGCAGTATGAATCTGATGAATGACCCTGGAGTGATTCAATTACTAGTGACAGTCGAGGATACAGGTATAGGAATTCCTTTGGATGCACAAAACCGCATATTCACCCCTTTTATGCAAGCTGATAGTTCCACCTCACGAACATATGGTGGGACTGGCATAGGACTGAGCATTAGTAAATGCTTAGTAGACCTTATGAGAGGAGAAATTGGATTTGTCAGCGAACCTGGAATTGGCAGTGCGTTTTCTTTTAGTGCAACTTTCAGGGCACCAAAAGCCTCATCTGTGGATACAAAGCGGCAGCAGTGCAACCCTTTTGTTTCAAAATTTCAAGGTTTGAGAGCACTTGTGGTGGATAGAAGAAAAATCCGTGCTGAAGTTACTAGATATTATCTGCGGAGGATTTGGGTGTCTGTGGATATTGCTTATAGTCTTAACTCAGCACGCTCTTATCTATCCGGTTCTTCCAACAAGAGTAATTCTCAACAGTGGGAAATGATTCTGATAGACAAGGATGTTTTGGATAAAGAAAGTAGTCTATTGTATGTCATCGAGAAACAGAGGAAGAATGACGTCAAAAGAGACCCGAAAAGTTTTCCCAAGATTTTTCTCTTGGCAAACAACCTTAGTACTGATGAACGTGGCAAGCTAAAATCTGTTGGTGTTGTAGATGATATACTAATGAAACCTCTTTGGTTTAGTTCTTTGATTTCCTACTACAGAAGGAAAGAACCAAACCTTGGGAACTTGCTAAGACAGAAACATATTTTGGTGGTTGACGATAATGCAGTGAACAGAAAAGTAGCAGAAGGCATGCTACGAAGATATGGGGCAAAAGTAACTTGTGTGGAGGGTGGCAGGGCTGCTTTGAAGATACTTAAGCCACCGCATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGATTTGAAGTGACCAGACAAATCCGCTGTCTGGAGAGGGAGTTCAATGACAAAATTGCACATGGTGAAGCATCAACTGAGATGTTTGGTAATGTGGCTCCTTGGCACATGCCAATATTGGCCATGACAGCTGATGCAACTCAAGCTTCAATTGAAGAGTGCAATAGGTGTGGGATGGATGATTATGTGTCAAAGCCATTCGAAGAAGATCAGCTCTATGAGGCAGTGGCACGTTGCTTTCGGTCTGGTTGA 3711 0.4144 MEYSLSLSLSLLVSCFSLQRMSVNRKLSGLNGRMPPSSKSGKSNEALHESNSSLRKCKKKKPFFVWVFLGVVAVGIVWFFFVSSHSDSWMLRKDKRLGDCEERARILLQRHNISKKQLRAFVSLFSASDQSIMQMLSQCIGERRVQKLLSSDLGSTLQMVFSENKEFQKEHTSVPGQVELIEQCPVLNDSVQTNLKSLLLVEKTVSLASYSAIMSNLINNLFLGKDIVQSWVLELAAIQGYLTLSIGCSWILVGITICCRLAGFPLFWNQELVSQPKALQHSAGQNSKGAGRWRKKFLVTFVLLGIVVSIWLFWHLNNDIMLRREEMLINMCDERARMLQDQFNVSMNHVHALAILVSTFHHSKHPSAIDQKTFGEYTERTAFERPLTSGVAYAMKVLHSDREHFEKQHGWTIKKMETENETLVQDCIPENLNPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNANFPPNATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNAFVPITMYGTDVVDTGLLHISNLDFGDPMRKHEMHCRFKHKPPLPWTAINASVGVLVITLLLGHIFYAAISRIAKVEDDYRQMRELKFRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDESQMDYAQTAHMSGKDLISVINEVLDQAKIEAGKLELEAVELDPRSILDEVLSLFSGKSNEKGIELAAYVSNQVPEVVIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSVHLANEVKSPPHIMDVVLSQGFQDMSDRTYNTLSGFPVVNRWKSWANFKKLSSMNLMNDPGVIQLLVTVEDTGIGIPLDAQNRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMRGEIGFVSEPGIGSAFSFSATFRAPKASSVDTKRQQCNPFVSKFQGLRALVVDRRKIRAEVTRYYLRRIWVSVDIAYSLNSARSYLSGSSNKSNSQQWEMILIDKDVLDKESSLLYVIEKQRKNDVKRDPKSFPKIFLLANNLSTDERGKLKSVGVVDDILMKPLWFSSLISYYRRKEPNLGNLLRQKHILVVDDNAVNRKVAEGMLRRYGAKVTCVEGGRAALKILKPPHNFDACFMDLQMPEMDGFEVTRQIRCLEREFNDKIAHGEASTEMFGNVAPWHMPILAMTADATQASIEECNRCGMDDYVSKPFEEDQLYEAVARCFRSG 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2463 1236 ProSiteProfiles Response regulatory domain profile. 1096 1233 IPR001789 GO:0000160
Prci8g2463 1236 MobiDBLite consensus disorder prediction 29 50 - -
Prci8g2463 1236 CDD REC_hyHK_CKI1_RcsC-like 1097 1229 - -
Prci8g2463 1236 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 762 927 IPR003594 -
Prci8g2463 1236 SMART CHASE_2 365 564 IPR006189 -
Prci8g2463 1236 SMART HisKA_10 650 715 IPR003661 GO:0000155|GO:0007165
Prci8g2463 1236 Gene3D - 714 933 IPR036890 -
Prci8g2463 1236 Pfam His Kinase A (phospho-acceptor) domain 650 715 IPR003661 GO:0000155|GO:0007165
Prci8g2463 1236 SMART REC_2 1095 1229 IPR001789 GO:0000160
Prci8g2463 1236 ProSiteProfiles Histidine kinase domain profile. 657 931 IPR005467 -
Prci8g2463 1236 PRINTS Bacterial sensor protein C-terminal signature 856 870 IPR004358 GO:0016310|GO:0016772
Prci8g2463 1236 PRINTS Bacterial sensor protein C-terminal signature 874 884 IPR004358 GO:0016310|GO:0016772
Prci8g2463 1236 PRINTS Bacterial sensor protein C-terminal signature 915 928 IPR004358 GO:0016310|GO:0016772
Prci8g2463 1236 PRINTS Bacterial sensor protein C-terminal signature 891 909 IPR004358 GO:0016310|GO:0016772
Prci8g2463 1236 SUPERFAMILY CheY-like 950 1082 IPR011006 -
Prci8g2463 1236 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 636 716 IPR036097 GO:0000155|GO:0007165
Prci8g2463 1236 Gene3D CHASE domain 369 596 IPR042240 -
Prci8g2463 1236 CDD HisKA 650 711 IPR003661 GO:0000155|GO:0007165
Prci8g2463 1236 CDD HATPase_EvgS-ArcB-TorS-like 767 929 - -
Prci8g2463 1236 ProSiteProfiles CHASE domain profile. 365 589 IPR006189 -
Prci8g2463 1236 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 704 926 IPR036890 -
Prci8g2463 1236 FunFam Histidine kinase 4 369 596 - -
Prci8g2463 1236 SUPERFAMILY CheY-like 1094 1234 IPR011006 -
Prci8g2463 1236 Gene3D - 622 713 - -
Prci8g2463 1236 Gene3D - 316 368 - -
Prci8g2463 1236 Pfam CHASE domain 368 556 IPR006189 -
Prci8g2463 1236 Gene3D - 1094 1236 - -
Prci8g2463 1236 FunFam Histidine kinase 4 622 713 - -
Prci8g2463 1236 ProSiteProfiles Response regulatory domain profile. 955 1085 IPR001789 GO:0000160
Prci8g2463 1236 Pfam Response regulator receiver domain 1097 1229 IPR001789 GO:0000160
Prci8g2463 1236 PANTHER TWO-COMPONENT HISTIDINE KINASE 257 1229 - -
Prci8g2463 1236 MobiDBLite consensus disorder prediction 29 51 - -
Prci8g2463 1236 SMART HKATPase_4 762 935 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2463 Prci-Chr8 34717781 34729537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2463 276 1233 Miscellaneous Gene Families AT5G35750 66.735 0.0 1318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci8g2463 CHASE 1.3e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2463 K14489 - gmx:100805107 1713.35