Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2462 ATGGAATACTCTCTCTCTCTCTCTCTCTCTCTTTTGGTGTCATGTTTTAGTTTACAAAGAATGTCTGTGAATCGGAAGCTCTCTGGGTTAAATGGCAGGATGCCACCGAGTTCCAAGTCGGGCAAGTCAAATGAAGCCTTGCATGAGTCTAATTCTTCGCTCAGGAAATGCAAGAAGAAGAAGCCCTTTTTCGTGTGGGTTTTTCTTGGTGTTGTTGCGGTGGGAATTGTGTGGTTCTTCTTCGTCAGTTCTCACAGTGACTCATGGATGTTGAGGAAGGACAAAAGGCTGGGTGATTGTGAAGAGAGAGCTCGAATCTTGCTACAACGTCACAATATCAGCAAAAAGCAACTTCGTGCTTTCGTTTCCTTGTTCTCTGCATCAGATCAGATGTTATCCCAATGTATTGGCGAAAGAAGAGTACAAAAGCTGTTAAGCAGTGACCTTGGCAGTACTCTGCAGATGGTATTTTCAGAGAATAAGGAGTTTCAAAAGGAGCATACAAGTGTCCCAGGCCAAGTTGAACTTATAGAACAATGCCCAGTTCTCAATGATTCTGTTCAGACAAACCTGAAATCATTACTGCTAGTGGAAAAAACTGTATCATTGGCCTCATACTCTGCTATCATGTCCAATTTGATCAATAATTTGTTTCTTGGAAAGGACATTGTGCAGTCATGGGTATTGGAGTTAGCTGCAATTCAAGGTTATCTGACTTTGTCTATAGGATGCTCGTGGATTCTTGTTGGAATTACAATTTGTTGCAGATTGGCTGGCTTTCCTTTATTTTGGAATCAGGAGCTGGTTTCACAGCCCAAAGCATTGCAACATTCTGCTGGGCAAAATTCAAAGGGTGCTGGGAGGTGGAGGAAAAAGTTTTTAGTTACATTTGTGTTACTTGGAATAGTTGTGTCCATTTGGTTGTTCTGGCACCTGAATAACGATATTATGCTGAGGAGAGAAGAAATGCTTATTAATATGTGTGATGAGCGAGCTCGCATGCTGCAGGATCAGTTCAATGTGAGCATGAACCACGTTCACGCTTTGGCTATTCTTGTGTCCACCTTTCACCATAGTAAACATCCATCTGCTATTGATCAGAAAACTTTTGGTGAATATACGGAGAGAACAGCATTTGAGAGGCCACTAACAAGTGGTGTTGCTTATGCTATGAAAGTTCTCCACTCTGATAGGGAGCATTTTGAAAAGCAGCATGGGTGGACAATTAAGAAAATGGAAACTGAGAATGAAACACTTGTCCAAGATTGTATTCCGGAAAATCTCAATCCTGCCCCCATTCAAGATGAATATGCTCCTGTGATATTTGCTCAAGAAACTGTTTCCCATATTGTATCGATTGACATGATGTCTGGAAAGGAAGACCGTGAGAATATCTTGCGAGCAAGAGCAACTGGAAAGGGAGTTCTAACATCTCCTTTCAAACTACTGAAGTCCAATCACCTGGGTGTTGTCCTTACATTTGCTGTCTACAATGCTAATTTTCCTCCTAATGCTACACCAGAGCAACGCATTGAAGCTACTGTTGGGTACTTGGGTGCTTCCTATGACGTTCCATCACTGGTGGACAAGCTCCTGCATCAACTTGCCAGCAAACAAACCATTGTTGTAAATGTTTATGATACAACAAATGCATTTGTGCCTATCACAATGTATGGTACTGATGTTGTTGATACTGGGTTACTACATATAAGCAACCTGGATTTTGGGGATCCTATGCGAAAACATGAGATGCATTGCAGGTTCAAACACAAGCCTCCATTACCTTGGACAGCAATCAATGCATCAGTTGGTGTACTTGTTATTACTTTGCTTCTTGGTCACATTTTTTATGCAGCAATCAGTCGAATAGCAAAAGTGGAGGATGACTATCGTCAAATGAGGGAGCTCAAGTTTCGAGCTGAAGCTGCAGATGTAGCAAAATCTCAGTTTCTGGCAACAGTTTCACATGAGATTAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGAACTAGATGAAAGCCAGATGGATTATGCTCAGACTGCTCACATGAGTGGTAAGGATCTCATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGAAAGCTTGAACTTGAAGCTGTAGAACTTGATCCACGTTCTATTCTAGATGAGGTTCTTTCACTTTTCTCTGGAAAATCTAATGAAAAAGGAATTGAGTTGGCTGCTTATGTATCCAACCAGGTGCCAGAAGTTGTCATTGGTGATCCTAAACGATTCCGGCAAATAATAACTAATCTTGTTGGGAATTCACTTAAGTTCACTCATGATAAAGGACATGTATTTGTATCGGTTCATCTGGCAAATGAAGTAAAGAGCCCACCTCACATTATGGATGTAGTTCTGAGTCAAGGGTTCCAGGACATGTCAGACAGAACCTATAATACATTGAGTGGGTTTCCTGTTGTTAATAGATGGAAAAGCTGGGCAAATTTCAAAAAGTTAAGCAGTATGAATCTGATGAATGACCCTGGAGTGATTCAATTACTAGTGACAGTCGAGGATACAGGTATAGGAATTCCTTTGGATGCACAAAACCGCATATTCACCCCTTTTATGCAAGCTGATAGTTCCACCTCACGAACATATGGTGGGACTGGCATAGGACTGAGCATTAGTAAATGCTTAGTAGACCTTATGAGAGGAGAAATTGGATTTGTCAGCGAACCTGGAATTGGCAGTGCGTTTTCTTTTAGTGCAACTTTCAGGGCACCAAAAGCCTCATCTGTGGATACAAAGCGGCAGCAGTGCAACCCTTTTGTTTCAAAATTTCAAGGTTTGAGAGCACTTGTGGTGGATAGAAGAAAAATCCGTGCTGAAGTTACTAGATATTATCTGCGGAGGATTTGGGTGTCTGTGGATATTGCTTATAGTCTTAACTCAGCACGCTCTTATCTATCCGGTTCTTCCAACAAGAGTAATTCTCAACAGTGGGAAATGATTCTGATAGACAAGGATGTTTTGGATAAAGAAAGTAGTCTATTGTATGTCATCGAGAAACAGAGGAAGAATGACGTCAAAAGAGACCCGAAAAGTTTTCCCAAGATTTTTCTCTTGGCAAACAACCTTAGTACTGATGAACGTGGCAAGCTAAAATCTGTTGGTGTTGTAGATGATATACTAATGAAACCTCTTTGGTTTAGTTCTTTGATTTCCTACTACAGAAGGAAAGAACCAAACCTTGGGAACTTGCTAAGACAGAAACATATTTTGGTGGTTGACGATAATGCAGTGAACAGAAAAGTAGCAGAAGGCATGCTACGAAGATATGGGGCAAAAGTAACTTGTGTGGAGGGTGGCAGGGCTGCTTTGAAGATACTTAAGCCACCGCATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGATTTGAAGTGACCAGACAAATCCGCTGTCTGGAGAGGGAGTTCAATGACAAAATTGCACATGGTGAAGCATCAACTGAGATGTTTGGTAATGTGGCTCCTTGGCACATGCCAATATTGGCCATGACAGCTGATGCAACTCAAGCTTCAATTGAAGAGTGCAATAGGTGTGGGATGGATGATTATGTGTCAAAGCCATTCGAAGAAGATCAGCTCTATGAGGCAGTGGCACGTTGCTTTCGGTCTGGTTGA 3699 0.4147 MEYSLSLSLSLLVSCFSLQRMSVNRKLSGLNGRMPPSSKSGKSNEALHESNSSLRKCKKKKPFFVWVFLGVVAVGIVWFFFVSSHSDSWMLRKDKRLGDCEERARILLQRHNISKKQLRAFVSLFSASDQMLSQCIGERRVQKLLSSDLGSTLQMVFSENKEFQKEHTSVPGQVELIEQCPVLNDSVQTNLKSLLLVEKTVSLASYSAIMSNLINNLFLGKDIVQSWVLELAAIQGYLTLSIGCSWILVGITICCRLAGFPLFWNQELVSQPKALQHSAGQNSKGAGRWRKKFLVTFVLLGIVVSIWLFWHLNNDIMLRREEMLINMCDERARMLQDQFNVSMNHVHALAILVSTFHHSKHPSAIDQKTFGEYTERTAFERPLTSGVAYAMKVLHSDREHFEKQHGWTIKKMETENETLVQDCIPENLNPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNANFPPNATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNAFVPITMYGTDVVDTGLLHISNLDFGDPMRKHEMHCRFKHKPPLPWTAINASVGVLVITLLLGHIFYAAISRIAKVEDDYRQMRELKFRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDESQMDYAQTAHMSGKDLISVINEVLDQAKIEAGKLELEAVELDPRSILDEVLSLFSGKSNEKGIELAAYVSNQVPEVVIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSVHLANEVKSPPHIMDVVLSQGFQDMSDRTYNTLSGFPVVNRWKSWANFKKLSSMNLMNDPGVIQLLVTVEDTGIGIPLDAQNRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMRGEIGFVSEPGIGSAFSFSATFRAPKASSVDTKRQQCNPFVSKFQGLRALVVDRRKIRAEVTRYYLRRIWVSVDIAYSLNSARSYLSGSSNKSNSQQWEMILIDKDVLDKESSLLYVIEKQRKNDVKRDPKSFPKIFLLANNLSTDERGKLKSVGVVDDILMKPLWFSSLISYYRRKEPNLGNLLRQKHILVVDDNAVNRKVAEGMLRRYGAKVTCVEGGRAALKILKPPHNFDACFMDLQMPEMDGFEVTRQIRCLEREFNDKIAHGEASTEMFGNVAPWHMPILAMTADATQASIEECNRCGMDDYVSKPFEEDQLYEAVARCFRSG 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2462 1232 CDD HisKA 646 707 IPR003661 GO:0000155|GO:0007165
Prci8g2462 1232 CDD HATPase_EvgS-ArcB-TorS-like 763 925 - -
Prci8g2462 1232 ProSiteProfiles Histidine kinase domain profile. 653 927 IPR005467 -
Prci8g2462 1232 FunFam Histidine kinase 4 618 709 - -
Prci8g2462 1232 ProSiteProfiles CHASE domain profile. 361 585 IPR006189 -
Prci8g2462 1232 Pfam Response regulator receiver domain 1093 1225 IPR001789 GO:0000160
Prci8g2462 1232 SMART CHASE_2 361 560 IPR006189 -
Prci8g2462 1232 SMART REC_2 1091 1225 IPR001789 GO:0000160
Prci8g2462 1232 Gene3D - 710 929 IPR036890 -
Prci8g2462 1232 ProSiteProfiles Response regulatory domain profile. 951 1081 IPR001789 GO:0000160
Prci8g2462 1232 PANTHER TWO-COMPONENT HISTIDINE KINASE 249 1225 - -
Prci8g2462 1232 SUPERFAMILY CheY-like 946 1078 IPR011006 -
Prci8g2462 1232 Gene3D CHASE domain 365 592 IPR042240 -
Prci8g2462 1232 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 700 922 IPR036890 -
Prci8g2462 1232 SUPERFAMILY CheY-like 1090 1230 IPR011006 -
Prci8g2462 1232 CDD REC_hyHK_CKI1_RcsC-like 1093 1225 - -
Prci8g2462 1232 Pfam CHASE domain 364 552 IPR006189 -
Prci8g2462 1232 PRINTS Bacterial sensor protein C-terminal signature 870 880 IPR004358 GO:0016310|GO:0016772
Prci8g2462 1232 PRINTS Bacterial sensor protein C-terminal signature 887 905 IPR004358 GO:0016310|GO:0016772
Prci8g2462 1232 PRINTS Bacterial sensor protein C-terminal signature 911 924 IPR004358 GO:0016310|GO:0016772
Prci8g2462 1232 PRINTS Bacterial sensor protein C-terminal signature 852 866 IPR004358 GO:0016310|GO:0016772
Prci8g2462 1232 Pfam His Kinase A (phospho-acceptor) domain 646 711 IPR003661 GO:0000155|GO:0007165
Prci8g2462 1232 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 758 923 IPR003594 -
Prci8g2462 1232 Gene3D - 312 364 - -
Prci8g2462 1232 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 632 712 IPR036097 GO:0000155|GO:0007165
Prci8g2462 1232 SMART HKATPase_4 758 931 IPR003594 -
Prci8g2462 1232 FunFam Histidine kinase 4 365 592 - -
Prci8g2462 1232 Gene3D - 1090 1232 - -
Prci8g2462 1232 SMART HisKA_10 646 711 IPR003661 GO:0000155|GO:0007165
Prci8g2462 1232 ProSiteProfiles Response regulatory domain profile. 1092 1229 IPR001789 GO:0000160
Prci8g2462 1232 Gene3D - 618 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2462 Prci-Chr8 34717781 34729537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2462 272 1229 Miscellaneous Gene Families AT5G35750 66.735 0.0 1318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci8g2462 CHASE 1.3e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2462 K14489 - gmx:100805107 1719.13