Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2461 ATGGAATACTCTCTCTCTCTCTCTCTCTCTCTTTTGGTGTCATGTTTTAGTTTACAAAGAATGTCTGTGAATCGGAAGCTCTCTGGGTTAAATGGCAGGATGCCACCGAGTTCCAAGTCGGGCAAGTCAAATGAAGCCTTGCATGAGTCTAATTCTTCGCTCAGGAAATGCAAGAAGAAGAAGCCCTTTTTCGTGTGGGTTTTTCTTGGTGTTGTTGCGGTGGGAATTGTGTGGTTCTTCTTCGTCAGTTCTCACAGTGACTCATGGATGTTGAGGAAGGACAAAAGGCTGGGTGATTGTGAAGAGAGAGCTCGAATCTTGCTACAACGTCACAATATCAGCAAAAAGCAACTTCGTGCTTTCGTTTCCTTGTTCTCTGCATCAGATCAGGACATTGTGCAGTCATGGGTATTGGAGTTAGCTGCAATTCAAGGTTATCTGACTTTGTCTATAGGATGCTCGTGGATTCTTGTTGGAATTACAATTTGTTGCAGATTGGCTGGCTTTCCTTTATTTTGGAATCAGGAGCTGGTTTCACAGCCCAAAGCATTGCAACATTCTGCTGGGCAAAATTCAAAGGGTGCTGGGAGGTGGAGGAAAAAGTTTTTAGTTACATTTGTGTTACTTGGAATAGTTGTGTCCATTTGGTTGTTCTGGCACCTGAATAACGATATTATGCTGAGGAGAGAAGAAATGCTTATTAATATGTGTGATGAGCGAGCTCGCATGCTGCAGGATCAGTTCAATGTGAGCATGAACCACGTTCACGCTTTGGCTATTCTTGTGTCCACCTTTCACCATAGTAAACATCCATCTGCTATTGATCAGAAAACTTTTGGTGAATATACGGAGAGAACAGCATTTGAGAGGCCACTAACAAGTGGTGTTGCTTATGCTATGAAAGTTCTCCACTCTGATAGGGAGCATTTTGAAAAGCAGCATGGGTGGACAATTAAGAAAATGGAAACTGAGAATGAAACACTTGTCCAAGATTGTATTCCGGAAAATCTCAATCCTGCCCCCATTCAAGATGAATATGCTCCTGTGATATTTGCTCAAGAAACTGTTTCCCATATTGTATCGATTGACATGATGTCTGGAAAGGAAGACCGTGAGAATATCTTGCGAGCAAGAGCAACTGGAAAGGGAGTTCTAACATCTCCTTTCAAACTACTGAAGTCCAATCACCTGGGTGTTGTCCTTACATTTGCTGTCTACAATGCTAATTTTCCTCCTAATGCTACACCAGAGCAACGCATTGAAGCTACTGTTGGGTACTTGGGTGCTTCCTATGACGTTCCATCACTGGTGGACAAGCTCCTGCATCAACTTGCCAGCAAACAAACCATTGTTGTAAATGTTTATGATACAACAAATGCATTTGTGCCTATCACAATGTATGGTACTGATGTTGTTGATACTGGGTTACTACATATAAGCAACCTGGATTTTGGGGATCCTATGCGAAAACATGAGATGCATTGCAGGTTCAAACACAAGCCTCCATTACCTTGGACAGCAATCAATGCATCAGTTGGTGTACTTGTTATTACTTTGCTTCTTGGTCACATTTTTTATGCAGCAATCAGTCGAATAGCAAAAGTGGAGGATGACTATCGTCAAATGAGGGAGCTCAAGTTTCGAGCTGAAGCTGCAGATGTAGCAAAATCTCAGTTTCTGGCAACAGTTTCACATGAGATTAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGAACTAGATGAAAGCCAGATGGATTATGCTCAGACTGCTCACATGAGTGGTAAGGATCTCATATCAGTGATAAATGAGGTTCTTGATCAGGCTAAGATTGAGGCAGGAAAGCTTGAACTTGAAGCTGTAGAACTTGATCCACGTTCTATTCTAGATGAGGTTCTTTCACTTTTCTCTGGAAAATCTAATGAAAAAGGAATTGAGTTGGCTGCTTATGTATCCAACCAGGTGCCAGAAGTTGTCATTGGTGATCCTAAACGATTCCGGCAAATAATAACTAATCTTGTTGGGAATTCACTTAAGTTCACTCATGATAAAGGACATGTATTTGTATCGGTTCATCTGGCAAATGAAGTAAAGAGCCCACCTCACATTATGGATGTAGTTCTGAGTCAAGGGTTCCAGGACATGTCAGACAGAACCTATAATACATTGAGTGGGTTTCCTGTTGTTAATAGATGGAAAAGCTGGGCAAATTTCAAAAAGTTAAGCAGTATGAATCTGATGAATGACCCTGGAGTGATTCAATTACTAGTGACAGTCGAGGATACAGGTATAGGAATTCCTTTGGATGCACAAAACCGCATATTCACCCCTTTTATGCAAGCTGATAGTTCCACCTCACGAACATATGGTGGGACTGGCATAGGACTGAGCATTAGTAAATGCTTAGTAGACCTTATGAGAGGAGAAATTGGATTTGTCAGCGAACCTGGAATTGGCAGTGCGTTTTCTTTTAGTGCAACTTTCAGGGCACCAAAAGCCTCATCTGTGGATACAAAGCGGCAGCAGTGCAACCCTTTTGTTTCAAAATTTCAAGGTTTGAGAGCACTTGTGGTGGATAGAAGAAAAATCCGTGCTGAAGTTACTAGATATTATCTGCGGAGGATTTGGGTGTCTGTGGATATTGCTTATAGTCTTAACTCAGCACGCTCTTATCTATCCGGTTCTTCCAACAAGAGTAATTCTCAACAGTGGGAAATGATTCTGATAGACAAGGATGTTTTGGATAAAGAAAGTAGTCTATTGTATGTCATCGAGAAACAGAGGAAGAATGACGTCAAAAGAGACCCGAAAAGTTTTCCCAAGATTTTTCTCTTGGCAAACAACCTTAGTACTGATGAACGTGGCAAGCTAAAATCTGTTGGTGTTGTAGATGATATACTAATGAAACCTCTTTGGTTTAGTTCTTTGATTTCCTACTACAGAAGGAAAGAACCAAACCTTGGGAACTTGCTAAGACAGAAACATATTTTGGTGGTTGACGATAATGCAGTGAACAGAAAAGTAGCAGAAGGCATGCTACGAAGATATGGGGCAAAAGTAACTTGTGTGGAGGGTGGCAGGGCTGCTTTGAAGATACTTAAGCCACCGCATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGATTTGAAGTGACCAGACAAATCCGCTGTCTGGAGAGGGAGTTCAATGACAAAATTGCACATGGTGAAGCATCAACTGAGATGTTTGGTAATGTGGCTCCTTGGCACATGCCAATATTGGCCATGACAGCTGATGCAACTCAAGCTTCAATTGAAGAGTGCAATAGGTGTGGGATGGATGATTATGTGTCAAAGCCATTCGAAGAAGATCAGCTCTATGAGGCAGTGGCACGTTGCTTTCGGTCTGGTTGA 3426 0.4171 MEYSLSLSLSLLVSCFSLQRMSVNRKLSGLNGRMPPSSKSGKSNEALHESNSSLRKCKKKKPFFVWVFLGVVAVGIVWFFFVSSHSDSWMLRKDKRLGDCEERARILLQRHNISKKQLRAFVSLFSASDQDIVQSWVLELAAIQGYLTLSIGCSWILVGITICCRLAGFPLFWNQELVSQPKALQHSAGQNSKGAGRWRKKFLVTFVLLGIVVSIWLFWHLNNDIMLRREEMLINMCDERARMLQDQFNVSMNHVHALAILVSTFHHSKHPSAIDQKTFGEYTERTAFERPLTSGVAYAMKVLHSDREHFEKQHGWTIKKMETENETLVQDCIPENLNPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARATGKGVLTSPFKLLKSNHLGVVLTFAVYNANFPPNATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNAFVPITMYGTDVVDTGLLHISNLDFGDPMRKHEMHCRFKHKPPLPWTAINASVGVLVITLLLGHIFYAAISRIAKVEDDYRQMRELKFRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTELDESQMDYAQTAHMSGKDLISVINEVLDQAKIEAGKLELEAVELDPRSILDEVLSLFSGKSNEKGIELAAYVSNQVPEVVIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSVHLANEVKSPPHIMDVVLSQGFQDMSDRTYNTLSGFPVVNRWKSWANFKKLSSMNLMNDPGVIQLLVTVEDTGIGIPLDAQNRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMRGEIGFVSEPGIGSAFSFSATFRAPKASSVDTKRQQCNPFVSKFQGLRALVVDRRKIRAEVTRYYLRRIWVSVDIAYSLNSARSYLSGSSNKSNSQQWEMILIDKDVLDKESSLLYVIEKQRKNDVKRDPKSFPKIFLLANNLSTDERGKLKSVGVVDDILMKPLWFSSLISYYRRKEPNLGNLLRQKHILVVDDNAVNRKVAEGMLRRYGAKVTCVEGGRAALKILKPPHNFDACFMDLQMPEMDGFEVTRQIRCLEREFNDKIAHGEASTEMFGNVAPWHMPILAMTADATQASIEECNRCGMDDYVSKPFEEDQLYEAVARCFRSG 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2461 1141 PANTHER TWO-COMPONENT HISTIDINE KINASE 184 1134 - -
Prci8g2461 1141 ProSiteProfiles Response regulatory domain profile. 1001 1138 IPR001789 GO:0000160
Prci8g2461 1141 Gene3D - 221 273 - -
Prci8g2461 1141 CDD HisKA 555 616 IPR003661 GO:0000155|GO:0007165
Prci8g2461 1141 Pfam His Kinase A (phospho-acceptor) domain 555 620 IPR003661 GO:0000155|GO:0007165
Prci8g2461 1141 ProSiteProfiles Histidine kinase domain profile. 562 836 IPR005467 -
Prci8g2461 1141 SUPERFAMILY CheY-like 999 1139 IPR011006 -
Prci8g2461 1141 Gene3D - 999 1141 - -
Prci8g2461 1141 FunFam Histidine kinase 4 274 501 - -
Prci8g2461 1141 Gene3D CHASE domain 274 501 IPR042240 -
Prci8g2461 1141 Gene3D - 619 838 IPR036890 -
Prci8g2461 1141 PRINTS Bacterial sensor protein C-terminal signature 796 814 IPR004358 GO:0016310|GO:0016772
Prci8g2461 1141 PRINTS Bacterial sensor protein C-terminal signature 820 833 IPR004358 GO:0016310|GO:0016772
Prci8g2461 1141 PRINTS Bacterial sensor protein C-terminal signature 779 789 IPR004358 GO:0016310|GO:0016772
Prci8g2461 1141 PRINTS Bacterial sensor protein C-terminal signature 761 775 IPR004358 GO:0016310|GO:0016772
Prci8g2461 1141 SMART HisKA_10 555 620 IPR003661 GO:0000155|GO:0007165
Prci8g2461 1141 ProSiteProfiles CHASE domain profile. 270 494 IPR006189 -
Prci8g2461 1141 SMART REC_2 1000 1134 IPR001789 GO:0000160
Prci8g2461 1141 SMART HKATPase_4 667 840 IPR003594 -
Prci8g2461 1141 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 667 832 IPR003594 -
Prci8g2461 1141 SUPERFAMILY CheY-like 855 987 IPR011006 -
Prci8g2461 1141 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 541 621 IPR036097 GO:0000155|GO:0007165
Prci8g2461 1141 CDD REC_hyHK_CKI1_RcsC-like 1002 1134 - -
Prci8g2461 1141 Gene3D - 527 618 - -
Prci8g2461 1141 Pfam Response regulator receiver domain 1002 1134 IPR001789 GO:0000160
Prci8g2461 1141 CDD HATPase_EvgS-ArcB-TorS-like 672 834 - -
Prci8g2461 1141 ProSiteProfiles Response regulatory domain profile. 860 990 IPR001789 GO:0000160
Prci8g2461 1141 FunFam Histidine kinase 4 527 618 - -
Prci8g2461 1141 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 609 831 IPR036890 -
Prci8g2461 1141 Pfam CHASE domain 273 461 IPR006189 -
Prci8g2461 1141 SMART CHASE_2 270 469 IPR006189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2461 Prci-Chr8 34717781 34729537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2461 181 1138 Miscellaneous Gene Families AT5G35750 66.735 0.0 1316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci8g2461 CHASE 1.1e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2461 K14489 - gmx:100805107 1546.18