Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2459 ATGCAAGCATCAGAACACCATAGAAACTCAAGCATGCACTATCAACTCATGCAACAAACGGAGCCCTACTGCTTGCCGCAGTACCAAGCCTTGAATCATCAGATATACAGCAATGACATCAGAAGCCATGGAACCCACTTCCCTACTCCATGTTCTTCTGAACTTTATTGCACATTGGAATCATCCTCTGAAGCTGGAATTTTCAATGCTTATAACTCCCCTTTAACTGTGAGTTTCTCGCCTAATGGCAGCCCAATCTCTCAGCAAGATTCGCAGTCATACTCATACCCACCTGACCAACGTCATTCTCCTGACTATACGTATAGCTCTCCCATGAGTGGGTCCTGTGTAACTGATGATTTGCATAGCTTCAAGCACAAGTTGAGAGAGCTGGAGAGTGTAATGTTTGGCCCTGACTCTGATAATCTTGATAGCTATGACAGTACCTTCAAGGATGGAATTAACTTTCTTTCACCTGAAATGGACGGTTGGAGAAAAACAATGGAAGCAATTTCTAGTAAGGACCTGACACAGGTTCTAGTCGCATGTGCACAAGCAGTTGCAGATAATGATTTGTTGATGGCTCAATGTTTGATGGATGAATTACGCCAAATGGTGTCAGTTTCTGGCGAACCAATTCAGAGGTTGGGGGCATATTTGTTGGAAGGGCTTGTGGCTCGATTGTCTGCCTCTGGGAGTTCAATCTACAAAGCTTTAAGATGCAAAGAACCGGCAAGTGCTGATCTTCTCTCATATATGCACATACTTTACGAGGTCTGCCCCTACTTCAAATTTGGTTACATGTCTGCGAATGGAGCCATTGCTGAAGCCATGAAAGATGAAGACAGAGTTCATATTGTTGATTTCCAAATTGCTCAGGGAAGCCAATGGATTACTTTGATTCAGGCTTTTGCTGCTAGACCTGGGGGGCCACCCCACATCCGAATTACAGGTATTGATGATTCAACATCAGCTTATGCCCGTGGAGGAGGACTAAACATAGTGGGAAAGAGGCTTTCAAAGTTGGCTGAGAAATTCAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCTGGCTGTGATGTTCAGCTGCATAATCTTGGGGTTCGACCAGGGGAGGCTCTGGCTGTGAATTTTGCATTCATGCTACATCACATGCCCGACGAAAGTGTCAGCACTGAGAATCACAGGGATCGACTGCTACGTCTTGTGAAGAGCTTGTCTCCAAAAGTGGTGACACTTGTTGAGCAAGAATCAAACACGAACACTGCCCCGTTTTTCTCTCGTTTCCTTGAAGCTCTGGACTACTACAAAGCTATGTTTGAGTCAATCGATGTGACTCTTCCCAGAGATCACAAAGAGCGAATTAATGTGGAGCAGCATTGCTTGGCAAGAGACGTTGTTAACATCATAGCTTGTGAAGGAGTGGAGAGGGTGGAACGGCATGAGATGCTTGGCAAGTGGAGGTCCAGATTTGCAATGGCTGGTTTCACACCTTACCCTTTGAGCTCATTGGTTAATGGTACCATCAAGAAACTGCTTGAGAATTATTCTGATAGGTATACACTTCAAGAAAGAGGTGGGGCTCTCTATCTTGGTTGGATGACTAGAGATTTAGTTGCTTCTTGTGCGTGGAAGTAA 1641 0.4479 MQASEHHRNSSMHYQLMQQTEPYCLPQYQALNHQIYSNDIRSHGTHFPTPCSSELYCTLESSSEAGIFNAYNSPLTVSFSPNGSPISQQDSQSYSYPPDQRHSPDYTYSSPMSGSCVTDDLHSFKHKLRELESVMFGPDSDNLDSYDSTFKDGINFLSPEMDGWRKTMEAISSKDLTQVLVACAQAVADNDLLMAQCLMDELRQMVSVSGEPIQRLGAYLLEGLVARLSASGSSIYKALRCKEPASADLLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIVDFQIAQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLNIVGKRLSKLAEKFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFSRFLEALDYYKAMFESIDVTLPRDHKERINVEQHCLARDVVNIIACEGVERVERHEMLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYTLQERGGALYLGWMTRDLVASCAWK 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2459 546 MobiDBLite consensus disorder prediction 81 110 - -
Prci8g2459 546 Pfam GRAS domain family 176 546 IPR005202 -
Prci8g2459 546 ProSiteProfiles GRAS family profile. 167 546 IPR005202 -
Prci8g2459 546 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 145 540 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2459 Prci-Chr8 34679761 34683469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2459 114 546 GRAS Transcription Factor Family AT5G48150 77.677 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci8g2459 GRAS 8.1e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2459 - - gmx:100796496 925.62