Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2457 ATGCACATGGTTTCTTCGGACAAAAGTGCTGATTGCAATGCTTCTTCTGATAAATCGCTTCAAAGGCTGAGTTCTCAAAGTGATATTACTGTGTCACAAGAGACTTGTGATGATAAAAATGACTCATCCAACCCAGAGGGAGCAGGAAGAATTCCTTCTGTTGCAGCTGAGAGAGAGGTGCAAGATTCTGATGCTACTCCTGATGCACTGCAATCAGATCAAGAAGGTAGTGGATGTACTTCACCACTTCAAAGACCTTTGCAGAGTCCTAATACTAATCAGCGTCAATTACAATCTAGTGATGAAAGCCCCTCTATAATATGTGAAAAGAGTTCAAAAGAAAGTGTAGCTGAGAAAGAAGTGTGGGATTTGGATGCTACTTGCAATGCACGGAAATCAGAGCAAAAGAGTATATGCTCTTTACCTCAAGAGAAACCCTTGCAAAACCCTAGTACCATTCCACACACATTACAGTGTGGTCAGGATGGTCTCTCTATAGCACGTGAAAAAGTCTCAAAGGATGGATATAATTGGAGAAAATATGGCCAGAAAAATGTCAAGGGAAATGAATATATAAGGAGCTATTACAAGTGCACACATCCCAACTGCCCTGCAAAGAAGCAATTGGAACAGTCAAATAATGGACAGATTACAGATACCATTTGCATCGGCCAGCATAATCATCCCCAAGTAAACAGTCCACGACCTGCTGAAGAAAAATCAGACAAGCCCTCTCTTCCCATCATGAAAGACAACACATCCATTGAGCATGGATGTGTGCCTCAACAGATCAAGTCTCTAGAAACTCATCCTGTTTCAACAGTTTCCACAATTAATGAGGTCAAAGCTGCACTTTTACAGTCGACTGGAACAAGGGATGTGGTTCTTGCCAATGAGGATCCTGAGTCAAAACGCTTGAAGAAAAACATTAGTAATGTTGATGCCCCTGGGGCTGAGAAGTCAGCTGGTGAATCTCGTCATGTTGTTCAGACTTCAAGTGAGGTTGATTTTATTAATGATGGGTACCGTTGGCGCAAGTATGGGCAGAAACTAGTAAAAGGAAATCCAAATCCAAGCATTTTCGCTCCACGCTCTTCCAGAAGTTATTATCGGTGCTCAAGTCCCGGATGCCCTGTCAAAAAGCACGTGGAAAGGGCCTCTCATGATAAAAAAATTGTGATAACCACCTATGAGGGGCATCATGATCATGAAAGCCCCTCTGGAAGGACTGTTAGTCATGACGGAGCAGCAAACACATCCACAACAATCATCAACAGTGATTCAGGAACCAAATCTGGGGAAAACTCTGTTTTTGTTGATCCAGCAGAACAACAGACTTGCTTGGACCTAGAAAGCAGATCACAGAAGCGACCAAATGGTGAGCAAATTGCAAAGCCAAAGTCTTGTGATATGGTTGAATCTGAAGGGATTGCTACTCAAGCTTCTGAAAGTCCTTGGAGTGAGAAAGAACAAAAGGGCGACACGGGTGCTGGAAATGATTCAGGCGGCCTTGGCACCACATGCCATCGAGGTTCTGAGCCTCCATGTAGATTAAATAAACAGCAGACGGATGAGGTAAGAACCATATCAGAAGAAAGTAAGTTAAACAAGCAATCTGAACCTGATGCAGAACCAGTTCAAAGCTAA 1647 0.4293 MHMVSSDKSADCNASSDKSLQRLSSQSDITVSQETCDDKNDSSNPEGAGRIPSVAAEREVQDSDATPDALQSDQEGSGCTSPLQRPLQSPNTNQRQLQSSDESPSIICEKSSKESVAEKEVWDLDATCNARKSEQKSICSLPQEKPLQNPSTIPHTLQCGQDGLSIAREKVSKDGYNWRKYGQKNVKGNEYIRSYYKCTHPNCPAKKQLEQSNNGQITDTICIGQHNHPQVNSPRPAEEKSDKPSLPIMKDNTSIEHGCVPQQIKSLETHPVSTVSTINEVKAALLQSTGTRDVVLANEDPESKRLKKNISNVDAPGAEKSAGESRHVVQTSSEVDFINDGYRWRKYGQKLVKGNPNPSIFAPRSSRSYYRCSSPGCPVKKHVERASHDKKIVITTYEGHHDHESPSGRTVSHDGAANTSTTIINSDSGTKSGENSVFVDPAEQQTCLDLESRSQKRPNGEQIAKPKSCDMVESEGIATQASESPWSEKEQKGDTGAGNDSGGLGTTCHRGSEPPCRLNKQQTDEVRTISEESKLNKQSEPDAEPVQS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2457 548 MobiDBLite consensus disorder prediction 449 548 - -
Prci8g2457 548 ProSiteProfiles WRKY domain profile. 167 231 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 SMART WRKY_cls 338 405 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 SMART WRKY_cls 172 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 93 424 IPR044810 GO:0003700
Prci8g2457 548 MobiDBLite consensus disorder prediction 397 436 - -
Prci8g2457 548 Pfam WRKY DNA -binding domain 339 404 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 Pfam WRKY DNA -binding domain 173 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 SUPERFAMILY WRKY DNA-binding domain 169 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 MobiDBLite consensus disorder prediction 65 110 - -
Prci8g2457 548 MobiDBLite consensus disorder prediction 1 115 - -
Prci8g2457 548 FunFam WRKY transcription factor 162 232 - -
Prci8g2457 548 ProSiteProfiles WRKY domain profile. 333 406 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 MobiDBLite consensus disorder prediction 524 539 - -
Prci8g2457 548 MobiDBLite consensus disorder prediction 1 38 - -
Prci8g2457 548 SUPERFAMILY WRKY DNA-binding domain 330 406 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 MobiDBLite consensus disorder prediction 411 436 - -
Prci8g2457 548 Gene3D WRKY domain 165 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 Gene3D WRKY domain 325 399 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci8g2457 548 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2457 Prci-Chr8 34667582 34677642 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2457 112 419 WRKY Transcription Factor Family AT2G04880 44.785 5.83e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci8g2457 WRKY 6.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2457 K18834 - gmx:100781219 444.506