Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2455 ATGCCAGCTGAAAACTCATACGCAAACACATCTGATCTTATAGAACCATTTGCTGAGGTTGACCCAACTGGTAGGTTTGGGCGGTACAATGATCTTCTTGGCAGTGGTGCTGTGAAAAAGGTTTATAGGGCCTTTGATCAAGTGGAAGGTATAGAGGTAGCCTGGAATCAGGTGCGACTGAGGAATTTTACTGAAGACCCTGTGCTTTTAAATCGTCTTCATTCTGAGGTTGAGCTTCTTAGAACATTGAAGAACAAATATATCATTGTCTGTTATAGTGTATGGAAAGATGAAGAGTGGAACACTTTAAATTTTATTACTGAGATATGCACTTCTGGGAATCTGAGGGCTTATAGGAAGAAACATCGTCATGTGTCCATCAGAGCATTGAAGAAGTGGTCGAAGCAAGTTCTTGAAGGATTGGAATATCTTCATACTCATGACCCCTGCATTATTCACAGAGATCTCAACTGTAGTAACATTTTCATTAATGGGAATATTGGCCAGGTAAAAATTGGTGATCTTGGATTGGCTGCAATAGTTGGAAAGAATCATGCAGCACATTCAATTATAGGGACACCAGAATATATGGCACCAGAGCTGTATGAGGAGGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAGATGGTCACAATGGAGATACCATATAGTGAATGTGATAGCATTGCCAAGATATAAAAGAAGGTAACAACAGGAATAAAGCCGCAGGCTCTAAACGAGGTCACTAATGCAGAGTTGAAGGCATTCATTGAGAAGTGCATAGCACAACCAAGGGCACGTCCTTCAGCCACAGATCTCCTCAACGATCCTTTCTTTTCTGAACTCAACAATGACCAAGGACGAAATCCAGATCCAATTGATCATGGACAATCTTATTCAAGGCACGGTCTAATATTAAATCTGGTCACTGCCTCAATCTATATATCCATGGCTCTTGGCACCCCCTCAAGTTACTCCTTGGCTTCGAGTCCTTTCTCTTCGCCCAACCTTGGAGCCTTGCTCAAGATCAAGGTCATCACATGGAGCCAAGAGACTGGTTTGCCTGTTTCAATTCGCGTTCGGGTTGGAGATAAGATCTTTAATCTTCACAGATTTCCACTTGCCTCAAAGAGTGGGTATTTCAAGAAAAAGTTGAACAATGAAACATCAGAGATTGAGCTGCCGGGAGATTTCCCCGGGGGAGCAGACGCCTTTGAGATGATTGCCTTGTTCATCTATGGCTCATCCTCACTGATCGACCCTTTCAATGTAGCATCCCTCCGCTGTGCAGCAGAGTTTCTTGAAATGACTGAAGAACAGTGTTCAGGAAATCTGTGTGAGAGATTTGATCTTTATTTGAACCAAGTGGTGCTTCAGAGCTGGGATGACACGTTGATTGTACTGAAAAGATGTGAGATTCTGCTTCCTTGGTCTGAAGATCTTCTCGTGGTGAGTCGCTGTATAGAGTCTCTTGCTTTTATGGCATGTATGGAGATTCTTGACCCAGAAGGAAGAAGAGACACTCCGGTTGTTACAATGGATGAGCTAGCTTCACAGTCTTGGAGCTGTGAAATGAAGGATATGGTTCCTGTGGAGTTGTGGATCAAGGATCTGATAGCTCTGCCATTTGATTTCTTCAAAAGGGTCATAGGATCTTTGAGAAGACAAGGGATGAAAGAGAAGTATGTGAGTCCAATCATTGTTTTCTATGCAAATAAATGGCTTCTCTCCAGAAACACTCCAACCCAATTCTGTGAAAGTGACATTCTACAAGGTCTCATTGATCTTCTGCCTATTGGTGACAATAACCGCAGCAGCAGCAATAACAATAACAACAACAATAATGGCAATATTAATAAATCCAGAAGCAAAGTTATTATTCCTGTTGGGTTTTATTTTGCATTGCTTTCAAGATCTCTTGAACTTGGGTTGAAAAGTGAGAATATCAAAAGAAAACTGCAAGACCAGATCACAGCATTGCTGCACTTTGCACAAGAGGAGGATTTTTTTCCTCTTCTTCTTGTCCCAGATTACTCAGTGTCAACTATGGAGAACATAGTTTCAAAATATGTGGCATCAAACTCAGAAACAAACCATAGTCCAGTTGATGATGCAAGATTCTACAGAGTTGCAGAGTTGTGGGATTCATTTCTGTTTCATGTAATAGATGCAAACCCAGAAATGGAGCCCAAGAGATTCATTGAACTGATTGAAAGAATACCTGCAGCTTATAGACACGGTCATGACCAACTCTACAGGGCAATAAACAACTTTCTCAAGACACACAAAGAAATATCCCAAGAAGACAAAGGAGCAATATGCAAGAATCTCAGCTGTCAAAGGCTATCACAAGAGACGTGCATTGAAGCTGTTCAAAATGAGCTCATGCCTCTGCGTCTGATAGTGCAAGCACTGTTTGTTCAACAGCTAAACACACACCAAACCTTCAAAGAATGCTCAGATTCCTTCAGGTATGCAAATTATGGAGCAGAATTTTTATCAGGAAGCCTGTCCAGCTCTAGATGCCCTTACTCCAGAAGCCACAATCCAGCCGAAAGCCCATACACCGCCGCTGATGGCCCTGGTATGGGTAGTAGCAGCGGTCCATTGGGCTTGCTGCTTCAAAAGGACTTGATGATGATGCAGAAGATCAAGTTTTCCACCACAGAGTATGAGGCCACAAGCTTCAGAATCCAGAACCTTGAACAAGAACTCATGGGCCTGAAAAGAAGCCTGCAGTTGCAGAACACAGAGTTGAGCAAGAGTCAGAAGAAGATGGTGAAACCTTATGGGTTGGAAGGAAGATCGATGAGCAAGAAGAGGAATAGTGTGGGACAAGGCAGTAGTTGCATTAGTTCTGTGAATTTTGCTTCCCAGAGAAAATATGCGAGTAGGATATTGAAGTTGTTTCGTCGCTTAACATGGTTTGCAAGTAGGAAATCTAAGAGAAAGCCGGCAGCTTCTCCTCATTGGTCCAACTCAATGTAG 3006 0.4235 MPAENSYANTSDLIEPFAEVDPTGRFGRYNDLLGSGAVKKVYRAFDQVEGIEVAWNQVRLRNFTEDPVLLNRLHSEVELLRTLKNKYIIVCYSVWKDEEWNTLNFITEICTSGNLRAYRKKHRHVSIRALKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFINGNIGQVKIGDLGLAAIVGKNHAAHSIIGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSIAKIXKKVTTGIKPQALNEVTNAELKAFIEKCIAQPRARPSATDLLNDPFFSELNNDQGRNPDPIDHGQSYSRHGLILNLVTASIYISMALGTPSSYSLASSPFSSPNLGALLKIKVITWSQETGLPVSIRVRVGDKIFNLHRFPLASKSGYFKKKLNNETSEIELPGDFPGGADAFEMIALFIYGSSSLIDPFNVASLRCAAEFLEMTEEQCSGNLCERFDLYLNQVVLQSWDDTLIVLKRCEILLPWSEDLLVVSRCIESLAFMACMEILDPEGRRDTPVVTMDELASQSWSCEMKDMVPVELWIKDLIALPFDFFKRVIGSLRRQGMKEKYVSPIIVFYANKWLLSRNTPTQFCESDILQGLIDLLPIGDNNRSSSNNNNNNNNGNINKSRSKVIIPVGFYFALLSRSLELGLKSENIKRKLQDQITALLHFAQEEDFFPLLLVPDYSVSTMENIVSKYVASNSETNHSPVDDARFYRVAELWDSFLFHVIDANPEMEPKRFIELIERIPAAYRHGHDQLYRAINNFLKTHKEISQEDKGAICKNLSCQRLSQETCIEAVQNELMPLRLIVQALFVQQLNTHQTFKECSDSFRYANYGAEFLSGSLSSSRCPYSRSHNPAESPYTAADGPGMGSSSGPLGLLLQKDLMMMQKIKFSTTEYEATSFRIQNLEQELMGLKRSLQLQNTELSKSQKKMVKPYGLEGRSMSKKRNSVGQGSSCISSVNFASQRKYASRILKLFRRLTWFASRKSKRKPAASPHWSNSM 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2455 1001 SUPERFAMILY Protein kinase-like (PK-like) 30 340 IPR011009 -
Prci8g2455 1001 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2455 1001 SUPERFAMILY POZ domain 355 444 IPR011333 -
Prci8g2455 1001 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 17 327 - -
Prci8g2455 1001 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2455 1001 Pfam NPH3 family 539 793 IPR027356 -
Prci8g2455 1001 MobiDBLite consensus disorder prediction 849 869 - -
Prci8g2455 1001 ProSiteProfiles BTB domain profile. 362 427 IPR000210 GO:0005515
Prci8g2455 1001 Gene3D Potassium Channel Kv1.1; Chain A 355 461 IPR011333 -
Prci8g2455 1001 CDD STKc_WNK 25 285 - -
Prci8g2455 1001 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Prci8g2455 1001 Gene3D Phosphorylase Kinase; domain 1 14 108 - -
Prci8g2455 1001 SMART BTB_4 362 460 IPR000210 GO:0005515
Prci8g2455 1001 Coils Coil 897 924 - -
Prci8g2455 1001 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Prci8g2455 1001 ProSiteProfiles NPH3 domain profile. 538 817 IPR027356 -
Prci8g2455 1001 Pfam BTB/POZ domain 364 453 IPR000210 GO:0005515
Prci8g2455 1001 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2455 Prci-Chr8 34629724 34639819 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2455 15 285 MAP Kinase Kinase Kinase AT5G55560 79.336 4.80e-160 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Prci8g2455 NPH3 5.3e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2455 - - pcin:129317768 1929.45