Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2399 ATGGAAGCAAGCAAAGAGGAGGAGGCTCATAAAGCAATAGAAATTGCTGAGCAGCGATTTGCTCAGAGAGACTTTGCTGGTGCAAAAAATTATGCATTGAAAGCTAAAACCCTATGTCCAGGAATGGAGGGTATAGCTCAAATGGTGGCAACATTTGAAGTTTACGTTGCTTCTGAGATTGAAAATAATGCTGAAAGAGATTATTATTCAATTCTCGGATTAAAACCTTCAGCTGATGAAGATAGCATCAAGAAACAGTACAGGAAGATGGCTGTGTTGCTCCACCCAGATAAGAACAAATGTGTAGGAGCTGATGGAGCATTTAAGCTTGTATCCGAAGCGTGGACATGGTTGTCAGATAATGCTAAGCGCAGTTCTTATGATCTCAAGAGAAATGCACAACTATCTGCTGGGGTTAATCAGACAAATTTGTCTTCAGTCCATGCTACAGGAGCTACAGGTTATACTTATAATAAATGTTCCAATTATTCAACCTCCCATGGTAGGCTTGACACTTTCTGGACAATTTGCACTTCGTGTAAAGTTCAGTATGAGTATCTACGCAAATATGTGAATAAGAGACTTTCATGCAAAAACTGTCGTGGTACTTTCATTGCTGTTGAAACTGGGGCACCCCCTGCAAATGGTTCCTTCCCATATGGTCCTTGGTCTTGTACACTGAGTAATAGTTATGGAAGCCATTCGATTGATGGAGTTACGTATGTCCCTACTAGCGCTCCTTATTTTAATGGAAATGGAGTCACTGGATATCATTCTGGACATGGATACGAGTATGTTCCAAATGTTTCATTTCAGTGGAGCTCAGCAAGACATGTCAATCAAAACGGACCAACTTCATTACCTGCTGCTGGTTCAGTATATCAGGCCAATGGACATGCGAAGCGAGGGAGACCAAGAATTAGATCAGAAGTCGATAGGAGTCACCATGTGGGAGAGACTGTTCTCAATATAAATCCAGATTTATCACATTCTTGTTATGATCCGCAGGAAGTTAATCCCAGTAAGCCTGACAAGAGAAGGAAAGTTGTTGCGGAAGCCGGCTGCAGAAATAACATTGAGGATAATGACTTGAAAGTTGCTCCAGAATCAAGATTGGCCAATAAAAATGAAAGCATTGGGCATTGCCCTAAGCTTTCCAGTACAAGTGAAGTTCAGTCCAAACAGTCTTCCATGGAATTGGTGTTTGACACTAGAAAAGCATTAATTGAGAAGGCCAGAAGAGAAATTAGAAAAAAACTGGAAGAGATGAAGTTGAAATCTGAAACGGCTGCTGCAGTTAAGGAGAAAGAAAAAGCAAAAGCTGAAGTCATTCAAGACAAAAAAGACACATATGGACGGCCAAGTCTAAATTTTTCTGGTCATCAACTAGAGCATAGGAAAAGCGGTCCAGTCTCAATCACTGTCCCAGATTCTGATTTTCATGACTTTGATAAAGACAGGTCAGAGGAATGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGACGGAATGCCTCGATTGTATTGTATCATCCGGGAGGTCATTTCTACCAATCCATTTAAGATTCATATTAGTTACTTAAGCTCCAAAACTGATAGTGAGTTTGGCTCAGTGAATTGGCTAGATTCAGGTTTTACTAAATCTTGTGGAAATTTTAGGGCCTGGAGCTCTGATATTGTTGAGCATGTTAACATTTTTTCTCATGCTCTTAGCCGTGAGAAGGCTGGTCGAGGTGGTTGTGTTCGTATATATCCTAGAATAGGAGATATTTGGGCTGTTTACCGAAATTGGTCGCCAGACTGGAACAGAGGCACCCCAGATGAAGTGAGGCATCAGTATGAAATGGTGGAGGTTCTTGATGAATATTCTGAGGAGTTTGGGGTTTGTGTGACTCCCCTTGTAAAGTTAGATGGATTCAAAACAGTATATCAGAGGAATCCTGACAAAAACGCCATTAGATGGATACCGAGAAGAGAAATGTTGCGCTTCTCGCACCAAGTGCCGTCGTGGTTCGTCAAGGGAAAAGGAAGCCATTTGCCAGAAAGGTGCTGGGACCTGGATCCAGCTGCCACCCCAGATGGACTTCTTCATGCTGCAACTGCGGAAGGAAACGGTTTGTAG 2130 0.4202 MEASKEEEAHKAIEIAEQRFAQRDFAGAKNYALKAKTLCPGMEGIAQMVATFEVYVASEIENNAERDYYSILGLKPSADEDSIKKQYRKMAVLLHPDKNKCVGADGAFKLVSEAWTWLSDNAKRSSYDLKRNAQLSAGVNQTNLSSVHATGATGYTYNKCSNYSTSHGRLDTFWTICTSCKVQYEYLRKYVNKRLSCKNCRGTFIAVETGAPPANGSFPYGPWSCTLSNSYGSHSIDGVTYVPTSAPYFNGNGVTGYHSGHGYEYVPNVSFQWSSARHVNQNGPTSLPAAGSVYQANGHAKRGRPRIRSEVDRSHHVGETVLNINPDLSHSCYDPQEVNPSKPDKRRKVVAEAGCRNNIEDNDLKVAPESRLANKNESIGHCPKLSSTSEVQSKQSSMELVFDTRKALIEKARREIRKKLEEMKLKSETAAAVKEKEKAKAEVIQDKKDTYGRPSLNFSGHQLEHRKSGPVSITVPDSDFHDFDKDRSEECFKPKQIWALYDEEDGMPRLYCIIREVISTNPFKIHISYLSSKTDSEFGSVNWLDSGFTKSCGNFRAWSSDIVEHVNIFSHALSREKAGRGGCVRIYPRIGDIWAVYRNWSPDWNRGTPDEVRHQYEMVEVLDEYSEEFGVCVTPLVKLDGFKTVYQRNPDKNAIRWIPRREMLRFSHQVPSWFVKGKGSHLPERCWDLDPAATPDGLLHAATAEGNGL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2399 709 Pfam Domain of unknown function (DUF3444) 472 677 IPR024593 -
Prci8g2399 709 CDD DnaJ 67 120 IPR001623 -
Prci8g2399 709 PRINTS DnaJ domain signature 123 142 IPR001623 -
Prci8g2399 709 PRINTS DnaJ domain signature 87 102 IPR001623 -
Prci8g2399 709 PRINTS DnaJ domain signature 69 87 IPR001623 -
Prci8g2399 709 PRINTS DnaJ domain signature 103 123 IPR001623 -
Prci8g2399 709 PANTHER BNAC03G44070D PROTEIN 1 695 - -
Prci8g2399 709 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Prci8g2399 709 SUPERFAMILY Chaperone J-domain 64 138 IPR036869 -
Prci8g2399 709 Coils Coil 406 429 - -
Prci8g2399 709 MobiDBLite consensus disorder prediction 328 347 - -
Prci8g2399 709 SMART dnaj_3 66 123 IPR001623 -
Prci8g2399 709 Gene3D DnaJ domain 55 152 IPR036869 -
Prci8g2399 709 Pfam DnaJ domain 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2399 Prci-Chr8 32280448 32284059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2399 8 265 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.909 5.73e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2399 - - gmx:100788692 1082.78