Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2391 ATGGAACGCACCAATGCCATGGATGGAGCTCCTGGGATTTCAAAATCGAATGTCAAGAATTCGAATTTCACCTTCAACACTCCTTCAGCTTCATCTTCGCGCCCGGTTTCGGGCCTGTCTAGGCCGAGATTGATGAAGGTTCGAAAGCAGAATAATGCTCAGAGTTTGAGGTCGACGACAGGGATCGGGGAGAATCTGCTTGCTTCTGGTTTCAATCCTTTTGCTTCTGATGACGATAACTTGGTTCGACCCTTTTCTGGGTCGGGGATGGCTTCGTCGTCTATATTCAGTGAAATTGATGCTGTTCAGACTGGAAATGAGCCATTTGTCTTTGGAGCAAAGACGGTTGATTCGGGTTCGAATTTAAATAAGAACAACATGGGTTCTGGTTTGAATTTCGATCAAGGAATTGTTGATCAAATGAAAAATCTGAAAATGAGCAATGTGAATAGTGTTTCAAACTTTAAAGATGGGGGTTATAAGAAGGGCGAGTATTCATTTCAGAGCGGTCATAAGAAGAGTTCCAGTCATGATGGAAGCATGGCATCTACGCTTCCAGAAGATATGAGGAAGTTGAATATTGGTGTTGGTGGATTTGAAGACATTGACAAAGCCAAAAGCAGGTGTTTAAATTCATATACAGATAATTTGTCTAAATTCAAATTCCGAAGCATATCCAACCCAAGCGTTTCTTCCAGTGTTGAAATAGAACTCCAATGTGAGTTAAACAAGAAATTGAGTATTATAGATAGTTGTTCTGGTGGTCTACATATTGATAAGTCAACAAACGAAGTTCTCGACCGTATGAAGAATCTAAATGTAAAGGATTCTTCAGGTTTTGATAGTGTTAAGAAGAATGAAGTTGACGCAACGACTGGTGGCAAAAAAAAGTCTACGTCTGCAAGCAGTAAAACAACAACTAGTTATATTGGGGGAAGAAAAGAGGCCAGTCTGTTGAGAGAAATGGAGAAGTTAAAGTTGTTAAGTGAGAAGGGGGACTTCACTAGACCAAAATTTTGGAATCCTTCCTCTCAGGTACATGTGGGGGAAATTAATCAAACAGATGCAAGTGGTGGTCAGGTAGACAAACCCAAGGAAGGCAACAGAATGACACAAAATGCCACGTCGTCATCATCATTCTTATCTGGAGGCATTAATTTTCCCATGGTTGGAAATGATTCTGGAGTTACTAGGACAGATGAATTTGTCTTTACAGGGATCAAAGATAATTCAAACTCATCTTTTGTTGAGTTCAAAACACCTGCATTAAGGAACGAACAAAGTTGCTACACAAGAGTGAAGAAAAGGAGAGGTAAACTGAAGCTGTCTACCCCTGTCCAGCTGTTTCATGGACAAGATTTTGTTTCAAAGGAGAATGTTACCGAAGGAAACCCTGAGGCTTCTGAGGCTTATTCACCAATGGAAGTGTCTCCATATCAGGAAACGTTGGCTGAAACTCGGTGGTCAAGGGAGAACTCTGTGACGTCCAATGAGTCATCGAGTCTTGATACCAACTCCGTAGTGCAGACAACTGCTCATGATCCTATTGATGAAGATGTAATAATGAAAACAGAACTCTTTATTGCTGAATGTGATGCTGCATGCAATGAAACAAAGGAGAAAGCTTCAGAGTATCACATTCCTAAAAATATTTTCAATGAAGATCCACAAGATGGGTCCGCATCTGGGGTGGAAACTGAAAGCTTTAAGTCTGCAAATGATGACGTGGACATAATCAGTGATGCAGCTAACACATCAGTAGATGTTGCAAGCAGTCCAAGCTCAAGTGTTGAAGCCTGTGGTGGTGATAGTATTCCACATCTCAGTCGTGCTTCAAGTTCCAATGATATAACTGGGTTCCCCTTCACATTTTCTGCCTCTTACTCCTCTGAGGTTCAATCATCTAGCCCTAAGCGCCACCTCAAAAAGAAAAGTTGGGTAAAAGTTGGTTATGATGCTCACAGCTCCACTCCAAACTTGAAAATTTCCTATTCATCACCATCAAAGTCCTTTTCTTCTTGTTCCAAAACATCATCTCTTTTCACATCTGGGCAAGCTCAAAAAGACAAAGTATCAACTCCTCAACCTAAAACATGGGATTCTGAGATTAGTAAGGAGCAGGGGATGAAAGAGGAGCCTGCTTCTAATACTGCTGCAAGCATTGCTGCTCAGGAAGCTTGTGAAAAGTGGCGACTCAGGGGAAACCAAGCCTATAAAAATGGGGATCTATCTATGGCAGAGGATTGTTACACTAAAGGACTTCAATGTGTTTCTAAAGAAGCAACATCCAGGAGCTCCATGAGAGCTTTGATGCTTTGTTATAGCAATCGTGCTGCTACGCGCATGTCTCTTGGAAGGATGAGAGATGCACTAAAAGATTGTATACTGGCAGCTGAAATAGATCCAAATTTCCTCAGGGTACAACTTAGAGCTGCGAATTGTTACCTTGCTTTGGGGAAAGTTGAAGATGCATTGCAATATTTCAAGAGGTGCTTGCAAACAGGAGCTGGTGTTTGTGTAGATCGAAAAATTGCTGTGGAAGCTTCTGATGGCTTACAAAAGGCACAGTTGTGTAAATTTGAAGAGGTGATTCAGTTGTGTGACCAAACCCTTGGTTCTGCTGAGAAGAATTTTTGTTCATTGGATGCTGATGGAGAAGTCATAAATTTGGATAACTCAAAACTCTCAAAATGCTTCTACTTCAGGCTATGGCGATGCTCAATGAAAATTAAATCCTACTGTCACCTTGGAAAGCTTGAAGAAGGTCTTTGTTCGCTAGAGGAACAAGAAAAAATGGTCTCTTCCATGAACAAGAGTGGAAGCAATTTTTTTGACTCACTGATTCCCCTGGCTGCCATTGTACGTGAACTATTACATCACAAGACTGCAGGGAATGAAGCATTTCAGGCAGGAAGGCATGCAGAAGCTGTTGAGCATTATACAGCAGCTTTGTTATCTAATGTGGAGTCCCGCCCATTTTCAGCTGTCTGCTTTTGTAATCGTGCTGCTGCTTATACAGCACTAGGTCAAATTACTGATGCTATTGCAGATTGCTGTCTAGCTATAGCTCTGGATGAAAATTATTTGAAGGCACTTTCTAGGCGTGCAACTCTGTATGAGATGATCAGAGATTACGCCCAAGCAGCTAGTGATATTCGGAGGCTTGTCTCTATTCTCAATAAGCGGGTGGATGATAAGGCCAATCAGCATGGAATATCTGATAGATCTTATAATTATGCTAATGACTTGAAACAGAATTCTATTCGGCTTTCTGAAATGGAGGAGGAAGCCAGAAAGGAGATCGCTCTTGACATGTACCTCATATTGGGAGTTGAACCATCTGTTTCTACATCTGAAATCAAGAAGGCCTATCGAAAAGCTGCACTTAGGCATCATCCTGACAAGGCTGGCCAATCTTTGGCACGGAGTGACAATGGTGATGATCAGATGTGGAAGGATATTGCTGAAGAAGTACGTCGAGATGCTGATAGGCTTTTCAAAATTATTGGAGAGGCCTATGCAGTATTGTCGGACCCTGCCAAGCGTGCACAATATGATGCTGAAGAAGAAATGAGAAATGCTCGAAAGAAGCGCCATGGTGGTATCATGGCTAGAACTAATGTTGACACCCAATCTTATCCATTTGAGCAAAGCAACATTAGGAGACACTGGAGAGATTTGCGGAGATCGTATGGCGGTTCTTCTTCCAGAGGTTTTGAAACTGGTCAGTCAGGCAGGTACTAA 3744 0.4183 MERTNAMDGAPGISKSNVKNSNFTFNTPSASSSRPVSGLSRPRLMKVRKQNNAQSLRSTTGIGENLLASGFNPFASDDDNLVRPFSGSGMASSSIFSEIDAVQTGNEPFVFGAKTVDSGSNLNKNNMGSGLNFDQGIVDQMKNLKMSNVNSVSNFKDGGYKKGEYSFQSGHKKSSSHDGSMASTLPEDMRKLNIGVGGFEDIDKAKSRCLNSYTDNLSKFKFRSISNPSVSSSVEIELQCELNKKLSIIDSCSGGLHIDKSTNEVLDRMKNLNVKDSSGFDSVKKNEVDATTGGKKKSTSASSKTTTSYIGGRKEASLLREMEKLKLLSEKGDFTRPKFWNPSSQVHVGEINQTDASGGQVDKPKEGNRMTQNATSSSSFLSGGINFPMVGNDSGVTRTDEFVFTGIKDNSNSSFVEFKTPALRNEQSCYTRVKKRRGKLKLSTPVQLFHGQDFVSKENVTEGNPEASEAYSPMEVSPYQETLAETRWSRENSVTSNESSSLDTNSVVQTTAHDPIDEDVIMKTELFIAECDAACNETKEKASEYHIPKNIFNEDPQDGSASGVETESFKSANDDVDIISDAANTSVDVASSPSSSVEACGGDSIPHLSRASSSNDITGFPFTFSASYSSEVQSSSPKRHLKKKSWVKVGYDAHSSTPNLKISYSSPSKSFSSCSKTSSLFTSGQAQKDKVSTPQPKTWDSEISKEQGMKEEPASNTAASIAAQEACEKWRLRGNQAYKNGDLSMAEDCYTKGLQCVSKEATSRSSMRALMLCYSNRAATRMSLGRMRDALKDCILAAEIDPNFLRVQLRAANCYLALGKVEDALQYFKRCLQTGAGVCVDRKIAVEASDGLQKAQLCKFEEVIQLCDQTLGSAEKNFCSLDADGEVINLDNSKLSKCFYFRLWRCSMKIKSYCHLGKLEEGLCSLEEQEKMVSSMNKSGSNFFDSLIPLAAIVRELLHHKTAGNEAFQAGRHAEAVEHYTAALLSNVESRPFSAVCFCNRAAAYTALGQITDAIADCCLAIALDENYLKALSRRATLYEMIRDYAQAASDIRRLVSILNKRVDDKANQHGISDRSYNYANDLKQNSIRLSEMEEEARKEIALDMYLILGVEPSVSTSEIKKAYRKAALRHHPDKAGQSLARSDNGDDQMWKDIAEEVRRDADRLFKIIGEAYAVLSDPAKRAQYDAEEEMRNARKKRHGGIMARTNVDTQSYPFEQSNIRRHWRDLRRSYGGSSSRGFETGQSGRY 1247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2391 1247 ProSitePatterns Nt-dnaJ domain signature. 1166 1185 IPR018253 -
Prci8g2391 1247 MobiDBLite consensus disorder prediction 166 185 - -
Prci8g2391 1247 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 857 1237 - -
Prci8g2391 1247 Gene3D Tetratricopeptide repeat domain 956 1080 IPR011990 GO:0005515
Prci8g2391 1247 MobiDBLite consensus disorder prediction 277 308 - -
Prci8g2391 1247 Gene3D Tetratricopeptide repeat domain 716 856 IPR011990 GO:0005515
Prci8g2391 1247 Pfam DnaJ domain 1104 1186 IPR001623 -
Prci8g2391 1247 MobiDBLite consensus disorder prediction 293 308 - -
Prci8g2391 1247 Gene3D DnaJ domain 1089 1208 IPR036869 -
Prci8g2391 1247 MobiDBLite consensus disorder prediction 1 42 - -
Prci8g2391 1247 PRINTS DnaJ domain signature 1106 1124 IPR001623 -
Prci8g2391 1247 PRINTS DnaJ domain signature 1161 1181 IPR001623 -
Prci8g2391 1247 PRINTS DnaJ domain signature 1124 1139 IPR001623 -
Prci8g2391 1247 SMART dnaj_3 1103 1181 IPR001623 -
Prci8g2391 1247 SMART tpr_5 995 1028 IPR019734 GO:0005515
Prci8g2391 1247 SMART tpr_5 771 804 IPR019734 GO:0005515
Prci8g2391 1247 SMART tpr_5 805 838 IPR019734 GO:0005515
Prci8g2391 1247 SMART tpr_5 1029 1062 IPR019734 GO:0005515
Prci8g2391 1247 SMART tpr_5 957 990 IPR019734 GO:0005515
Prci8g2391 1247 SMART tpr_5 727 760 IPR019734 GO:0005515
Prci8g2391 1247 MobiDBLite consensus disorder prediction 684 702 - -
Prci8g2391 1247 SUPERFAMILY TPR-like 727 834 IPR011990 GO:0005515
Prci8g2391 1247 Pfam Tetratricopeptide repeat 806 833 IPR019734 GO:0005515
Prci8g2391 1247 CDD DnaJ 1104 1178 IPR001623 -
Prci8g2391 1247 MobiDBLite consensus disorder prediction 10 38 - -
Prci8g2391 1247 SUPERFAMILY TPR-like 960 1059 IPR011990 GO:0005515
Prci8g2391 1247 ProSiteProfiles dnaJ domain profile. 1104 1189 IPR001623 -
Prci8g2391 1247 MobiDBLite consensus disorder prediction 354 378 - -
Prci8g2391 1247 MobiDBLite consensus disorder prediction 1226 1247 - -
Prci8g2391 1247 SUPERFAMILY Chaperone J-domain 1060 1185 IPR036869 -
Prci8g2391 1247 Coils Coil 1080 1100 - -
Prci8g2391 1247 MobiDBLite consensus disorder prediction 684 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2391 Prci-Chr8 31620774 31635904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2391 1106 1187 C2H2 Transcription Factor Family AT1G74250 34.146 4.33e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2391 K09527 - cave:132163311 1125.54