Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2390 ATGGAACGCACCAATGCCATGGATGGAGCTCCTGGGATTTCAAAATCGAATGTCAAGAATTCGAATTTCACCTTCAACACTCCTTCAGCTTCATCTTCGCGCCCGGTTTCGGGCCTGTCTAGGCCGAGATTGATGAAGGTTCGAAAGCAGAATAATGCTCAGAGTTTGAGGTCGACGACAGGGATCGGGGAGAATCTGCTTGCTTCTGGTTTCAATCCTTTTGCTTCTGATGACGATAACTTGGTTCGACCCTTTTCTGGGTCGGGGATGGCTTCGTCGTCTATATTCAGTGAAATTGATGCTGTTCAGACTGGAAATGAGCCATTTGTCTTTGGAGCAAAGACGGTTGATTCGGGTTCGAATTTAAATAAGAACAACATGGGTTCTGGTTTGAATTTCGATCAAGGAATTGTTGATCAAATGAAAAATCTGAAAATGAGCAATGTGAATAGTGTTTCAAACTTTAAAGATGGGGGTTATAAGAAGGGCGAGTATTCATTTCAGAGCGGTCATAAGAAGAGTTCCAGTCATGATGGAAGCATGGCATCTACGCTTCCAGAAGATATGAGGAAGTTGAATATTGGTGTTGGTGGATTTGAAGACATTGACAAAGCCAAAAGCAGGTGTTTAAATTCATATACAGATAATTTGTCTAAATTCAAATTCCGAAGCATATCCAACCCAAGCGTTTCTTCCAGTGTTGAAATAGAACTCCAATGTGAGTTAAACAAGAAATTGAGTATTATAGATAGTTGTTCTGGTGGTCTACATATTGATAAGTCAACAAACGAAGTTCTCGACCGTATGAAGAATCTAAATGTAAAGGATTCTTCAGGTTTTGATAGTGTTAAGAAGAATGAAGTTGACGCAACGACTGGTGGCAAAAAAAAGTCTACGTCTGCAAGCAGTAAAACAACAACTAGTTATATTGGGGGAAGAAAAGAGGCCAGTCTGTTGAGAGAAATGGAGAAGTTAAAGTTGTTAAGTGAGAAGGGGGACTTCACTAGACCAAAATTTTGGAATCCTTCCTCTCAGGTACATGTGGGGGAAATTAATCAAACAGATGCAAGTGGTGGTCAGGTAGACAAACCCAAGGAAGGCAACAGAATGACACAAAATGCCACGTCGTCATCATCATTCTTATCTGGAGGCATTAATTTTCCCATGGTTGGAAATGATTCTGGAGTTACTAGGACAGATGAATTTGTCTTTACAGGGATCAAAGATAATTCAAACTCATCTTTTGTTGAGTTCAAAACACCTGCATTAAGGAACGAACAAAGTTGCTACACAAGAGTGAAGAAAAGGAGAGGTAAACTGAAGCTGTCTACCCCTGTCCAGCTGTTTCATGGACAAGATTTTGTTTCAAAGGAGAATGTTACCGAAGGAAACCCTGAGGCTTCTGAGGCTTATTCACCAATGGAAGTGTCTCCATATCAGGAAACGTTGGCTGAAACTCGGTGGTCAAGGGAGAACTCTGTGACGTCCAATGAGTCATCGAGTCTTGATACCAACTCCGTAGTGCAGACAACTGCTCATGATCCTATTGATGAAGATGTAATAATGAAAACAGAACTCTTTATTGCTGAATGTGATGCTGCATGCAATGAAACAAAGGAGAAAGCTTCAGAGTATCACATTCCTAAAAATATTTTCAATGAAGATCCACAAGATGGGTCCGCATCTGGGGTGGAAACTGAAAGCTTTAAGTCTGCAAATGATGACGTGGACATAATCAGTGATGCAGCTAACACATCAGTAGATGTTGCAAGCAGTCCAAGCTCAAGTGTTGAAGCCTGTGGTGGTGATAGTATTCCACATCTCAGTCGTGCTTCAAGTTCCAATGATATAACTGGGTTCCCCTTCACATTTTCTGCCTCTTACTCCTCTGAGGTTCAATCATCTAGCCCTAAGCGCCACCTCAAAAAGAAAAGTTGGGTAAAAGTTGGTTATGATGCTCACAGCTCCACTCCAAACTTGAAAATTTCCTATTCATCACCATCAAAGTCCTTTTCTTCTTGTTCCAAAACATCATCTCTTTTCACATCTGGGCAAGCTCAAAAAGACAAAGTATCAACTCCTCAACCTAAAACATGGGATTCTGAGATTAGTAAGGAGCAGGGGATGAAAGAGGAGCCTGCTTCTAATACTGCTGCAAGCATTGCTGCTCAGGAAGCTTGTGAAAAGTGGCGACTCAGGGGAAACCAAGCCTATAAAAATGGGGATCTATCTATGGCAGAGGATTGTTACACTAAAGGACTTCAATGTGTTTCTAAAGAAGCAACATCCAGGAGCTCCATGAGAGCTTTGATGCTTTGTTATAGCAATCGTGCTGCTACGCGCATGTCTCTTGGAAGGATGAGAGATGCACTAAAAGATTGTATACTGGCAGCTGAAATAGATCCAAATTTCCTCAGGGTACAACTTAGAGCTGCGAATTGTTACCTTGCTTTGGGGAAAGTTGAAGATGCATTGCAATATTTCAAGAGGTGCTTGCAAACAGGAGCTGGTGTTTGTGTAGATCGAAAAATTGCTGTGGAAGCTTCTGATGGCTTACAAAAGGCACAGAAAGTATCAGAATTCATCAATCATTCTATTGAACTTTTGCAAAGAAGGACAACGTCTGACATGGATAGGGCATTGGAACAAATTAATGAGGCATTGATGATAAGTTCATACTCTGAAAAATTACTTGAAATGAAAGCAGAAGCTCTTTTCATGTTGTGTAAATTTGAAGAGGTGATTCAGTTGTGTGACCAAACCCTTGGTTCTGCTGAGAAGAATTTTTGTTCATTGGATGCTGATGGAGAAGTCATAAATTTGGATAACTCAAAACTCTCAAAATGCTTCTACTTCAGGCTATGGCGATGCTCAATGAAAATTAAATCCTACTGTCACCTTGGAAAGCTTGAAGAAGGTCTTTGTTCGCTAGAGGAACAAGAAAAAATGGTCTCTTCCATGAACAACAATTTTTTTGACTCACTGATTCCCCTGGCTGCCATTGTACGTGAACTATTACATCACAAGACTGCAGGGAATGAAGCATTTCAGGCAGGAAGGCATGCAGAAGCTGTTGAGCATTATACAGCAGCTTTGTTATCTAATGTGGAGTCCCGCCCATTTTCAGCTGTCTGCTTTTGTAATCGTGCTGCTGCTTATACAGCACTAGGTCAAATTACTGATGCTATTGCAGATTGCTGTCTAGCTATAGCTCTGGATGAAAATTATTTGAAGGCACTTTCTAGGCGTGCAACTCTGTATGAGATGATCAGAGATTACGCCCAAGCAGCTAGTGATATTCGGAGGCTTGTCTCTATTCTCAATAAGCGGGTGGATGATAAGGCCAATCAGCATGGAATATCTGATAGATCTTATAATTATGCTAATGACTTGAAACAGAATTCTATTCGGCTTTCTGAAATGGAGGAGGAAGCCAGAAAGGAGATCGCTCTTGACATGTACCTCATATTGGGAGTTGAACCATCTGTTTCTACATCTGAAATCAAGAAGGCCTATCGAAAAGCTGCACTTAGGCATCATCCTGACAAGGCTGGCCAATCTTTGGCACGGAGTGACAATGGTGATGATCAGATGTGGAAGGATATTGCTGAAGAAGTACGTCGAGATGCTGATAGGCTTTTCAAAATTATTGGAGAGGCCTATGCAGTATTGTCGGACCCTGCCAAGCGTGCACAATATGATGCTGAAGAAGAAATGAGAAATGCTCGAAAGAAGCGCCATGGTGGTATCATGGCTAGAACTAATGTTGACACCCAATCTTATCCATTTGAGCAAAGCAACATTAGGAGACACTGGAGAGATTTGCGGAGATCGTATGGCGGTTCTTCTTCCAGAGGTTTTGAAACTGGTCAGTCAGGCAGGTACTAA 3888 0.4146 MERTNAMDGAPGISKSNVKNSNFTFNTPSASSSRPVSGLSRPRLMKVRKQNNAQSLRSTTGIGENLLASGFNPFASDDDNLVRPFSGSGMASSSIFSEIDAVQTGNEPFVFGAKTVDSGSNLNKNNMGSGLNFDQGIVDQMKNLKMSNVNSVSNFKDGGYKKGEYSFQSGHKKSSSHDGSMASTLPEDMRKLNIGVGGFEDIDKAKSRCLNSYTDNLSKFKFRSISNPSVSSSVEIELQCELNKKLSIIDSCSGGLHIDKSTNEVLDRMKNLNVKDSSGFDSVKKNEVDATTGGKKKSTSASSKTTTSYIGGRKEASLLREMEKLKLLSEKGDFTRPKFWNPSSQVHVGEINQTDASGGQVDKPKEGNRMTQNATSSSSFLSGGINFPMVGNDSGVTRTDEFVFTGIKDNSNSSFVEFKTPALRNEQSCYTRVKKRRGKLKLSTPVQLFHGQDFVSKENVTEGNPEASEAYSPMEVSPYQETLAETRWSRENSVTSNESSSLDTNSVVQTTAHDPIDEDVIMKTELFIAECDAACNETKEKASEYHIPKNIFNEDPQDGSASGVETESFKSANDDVDIISDAANTSVDVASSPSSSVEACGGDSIPHLSRASSSNDITGFPFTFSASYSSEVQSSSPKRHLKKKSWVKVGYDAHSSTPNLKISYSSPSKSFSSCSKTSSLFTSGQAQKDKVSTPQPKTWDSEISKEQGMKEEPASNTAASIAAQEACEKWRLRGNQAYKNGDLSMAEDCYTKGLQCVSKEATSRSSMRALMLCYSNRAATRMSLGRMRDALKDCILAAEIDPNFLRVQLRAANCYLALGKVEDALQYFKRCLQTGAGVCVDRKIAVEASDGLQKAQKVSEFINHSIELLQRRTTSDMDRALEQINEALMISSYSEKLLEMKAEALFMLCKFEEVIQLCDQTLGSAEKNFCSLDADGEVINLDNSKLSKCFYFRLWRCSMKIKSYCHLGKLEEGLCSLEEQEKMVSSMNNNFFDSLIPLAAIVRELLHHKTAGNEAFQAGRHAEAVEHYTAALLSNVESRPFSAVCFCNRAAAYTALGQITDAIADCCLAIALDENYLKALSRRATLYEMIRDYAQAASDIRRLVSILNKRVDDKANQHGISDRSYNYANDLKQNSIRLSEMEEEARKEIALDMYLILGVEPSVSTSEIKKAYRKAALRHHPDKAGQSLARSDNGDDQMWKDIAEEVRRDADRLFKIIGEAYAVLSDPAKRAQYDAEEEMRNARKKRHGGIMARTNVDTQSYPFEQSNIRRHWRDLRRSYGGSSSRGFETGQSGRY 1295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2390 1295 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 15 1285 - -
Prci8g2390 1295 MobiDBLite consensus disorder prediction 166 185 - -
Prci8g2390 1295 MobiDBLite consensus disorder prediction 277 308 - -
Prci8g2390 1295 SUPERFAMILY Chaperone J-domain 1108 1233 IPR036869 -
Prci8g2390 1295 PRINTS DnaJ domain signature 1172 1187 IPR001623 -
Prci8g2390 1295 PRINTS DnaJ domain signature 1154 1172 IPR001623 -
Prci8g2390 1295 PRINTS DnaJ domain signature 1209 1229 IPR001623 -
Prci8g2390 1295 SMART tpr_5 771 804 IPR019734 GO:0005515
Prci8g2390 1295 SMART tpr_5 805 838 IPR019734 GO:0005515
Prci8g2390 1295 SMART tpr_5 1077 1110 IPR019734 GO:0005515
Prci8g2390 1295 SMART tpr_5 895 928 IPR019734 GO:0005515
Prci8g2390 1295 SMART tpr_5 1005 1038 IPR019734 GO:0005515
Prci8g2390 1295 SMART tpr_5 727 760 IPR019734 GO:0005515
Prci8g2390 1295 SMART tpr_5 1043 1076 IPR019734 GO:0005515
Prci8g2390 1295 ProSitePatterns Nt-dnaJ domain signature. 1214 1233 IPR018253 -
Prci8g2390 1295 Pfam Tetratricopeptide repeat 806 833 IPR019734 GO:0005515
Prci8g2390 1295 ProSiteProfiles dnaJ domain profile. 1152 1237 IPR001623 -
Prci8g2390 1295 MobiDBLite consensus disorder prediction 293 308 - -
Prci8g2390 1295 Gene3D Tetratricopeptide repeat domain 1004 1128 IPR011990 GO:0005515
Prci8g2390 1295 MobiDBLite consensus disorder prediction 1 42 - -
Prci8g2390 1295 SMART dnaj_3 1151 1229 IPR001623 -
Prci8g2390 1295 MobiDBLite consensus disorder prediction 684 702 - -
Prci8g2390 1295 Pfam DnaJ domain 1152 1234 IPR001623 -
Prci8g2390 1295 CDD DnaJ 1152 1226 IPR001623 -
Prci8g2390 1295 SUPERFAMILY TPR-like 1008 1107 IPR011990 GO:0005515
Prci8g2390 1295 MobiDBLite consensus disorder prediction 10 38 - -
Prci8g2390 1295 Gene3D Tetratricopeptide repeat domain 726 991 IPR011990 GO:0005515
Prci8g2390 1295 Gene3D DnaJ domain 1137 1256 IPR036869 -
Prci8g2390 1295 MobiDBLite consensus disorder prediction 1274 1295 - -
Prci8g2390 1295 MobiDBLite consensus disorder prediction 354 378 - -
Prci8g2390 1295 SUPERFAMILY TPR-like 728 920 IPR011990 GO:0005515
Prci8g2390 1295 MobiDBLite consensus disorder prediction 684 715 - -
Prci8g2390 1295 Coils Coil 1128 1148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2390 Prci-Chr8 31620771 31635904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2390 1154 1235 C2H2 Transcription Factor Family AT1G74250 34.146 4.68e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2390 K09527 - cave:132163311 1199.5