Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2381 ATGGGAAATCTTTGCTTTCAATTCTCCTTGATCATGTTCTTCATGCTTTGTCTTGTGGTTTGCCCGTCTTTATGTCAATCCAATTTTACCCTAGATGGCTTGGCACTTCTTGCTTTTAAATCTTCTGTAAGGGACCCTTACAATCACTTGAAAAATTGGTCCAACTCCTCATCTTTTTGCAGCTGGTTTGGTGTCACATGCGATTCTAAAAGTGAGAGAGTGACAATCTTGAGCCTTTCTGAGATGGGTCTCGAGGGAACCTTACCTTCACAAATTGGAAATCTGTCCTTCTTAATAAACCTTGAACTACAAAGCAACAACTTTCATGGCAAATTGCCGAAAGAGTTGCTTCATTTGCACAAATTAGAAAAACTAAACTTGAGTTATAATAATTTTAGTGGAGAAATTCTAACTTGGATAGGAAGCTTGTTTATGCTTAAACATTTGAGTCTTGCCAATAATACTTTTGGAGGTATCATCCCTCCAAGTATATTCAATATGTCTAAGTTGGAGACCTTGGATTTGATGTCTAATTCTATCAACGGACCTATTCCATTTGATATTGGAAGACTTCAACACCTGAAATTTTTGCGCATTTCTAGAAACATTCTTTCAGGAAATATACCTCCAACTATCTCTAACTTATCATCACTTGAACACATCTCTTTGTCTCTCAACTTCTTAGAAGGACATATTCCCAAAGAAATGAATAAGCTTACAAAGCTGAAAAACATGTTCATGGGTATGAACAAGTTGTCTGGTCAAGTACCAAGCATTGGAAATTTGATCATGCTTGAAAATTTATATCTTGCAAGCAATAACCTCCAAGGGGATATTCCCAATGAAATAAGCAATCTTACAAATTTGAACAGCATAGACTTAAGTGGTAATCAATTGTCTGGTCACATACCAAGAGGCATTGGCAAGTTCACTTGGCTTCAAGAGTTATTTCTGGACAACAATAACTTCGAAGGAAATATTTCCAATGAAATTATAAGTCTCGCAAATCTGGAGATCATGAGCCTAAGTGTTAATCAGCTATCTGGCCCCATACCAAGAGGCATTGAAAGTTTGACTATGCTTCAACAATTGTATCTTGATAGCAATAATTTAGAAGATAGGGGAAAATCCAAGACACACACGGAGACAATATCTACAATTGGTTATATTGCACCTGAATACGGATTTGCAGGAATTGTTTCAACAAAAGCAGATGTGTATAGCTATGGAATAATACTAATGGAAGTGTTCACAAGGAAAAAACCAACAGAAGATATGTTCATCAATGGATTAAGCTTGAAGACTTGGATAAGTAAATCAATGCCCGATGCATTGATTCAAGTCATGGATTCCAGTTTACTACAAGCCAATGAACAACATGTTGGTAGCATTTTGACAACTACATCTGCTGTTTTTGAGTTGGCCTTGAATTGCTGCTCCGATTTTCCAACAGAACGTTGCAATATGTCAGATATTGTAGCATCATTGAACAAGATCAAGGATTTGTACTATGCAAAGAAGTCAAATTTAAATAAATACTAA 1542 0.3612 MGNLCFQFSLIMFFMLCLVVCPSLCQSNFTLDGLALLAFKSSVRDPYNHLKNWSNSSSFCSWFGVTCDSKSERVTILSLSEMGLEGTLPSQIGNLSFLINLELQSNNFHGKLPKELLHLHKLEKLNLSYNNFSGEILTWIGSLFMLKHLSLANNTFGGIIPPSIFNMSKLETLDLMSNSINGPIPFDIGRLQHLKFLRISRNILSGNIPPTISNLSSLEHISLSLNFLEGHIPKEMNKLTKLKNMFMGMNKLSGQVPSIGNLIMLENLYLASNNLQGDIPNEISNLTNLNSIDLSGNQLSGHIPRGIGKFTWLQELFLDNNNFEGNISNEIISLANLEIMSLSVNQLSGPIPRGIESLTMLQQLYLDSNNLEDRGKSKTHTETISTIGYIAPEYGFAGIVSTKADVYSYGIILMEVFTRKKPTEDMFINGLSLKTWISKSMPDALIQVMDSSLLQANEQHVGSILTTTSAVFELALNCCSDFPTERCNMSDIVASLNKIKDLYYAKKSNLNKY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2381 513 Gene3D Ribonuclease Inhibitor 192 259 IPR032675 -
Prci8g2381 513 Gene3D Ribonuclease Inhibitor 260 357 IPR032675 -
Prci8g2381 513 FunFam Leucine-rich repeat receptor-like kinase 33 145 - -
Prci8g2381 513 SUPERFAMILY L domain-like 47 375 - -
Prci8g2381 513 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Prci8g2381 513 Pfam Leucine rich repeat 313 371 IPR001611 GO:0005515
Prci8g2381 513 FunFam Piriformospora indica-insensitive protein 2 279 376 - -
Prci8g2381 513 SUPERFAMILY Protein kinase-like (PK-like) 377 502 IPR011009 -
Prci8g2381 513 Gene3D Transferase(Phosphotransferase) domain 1 364 512 - -
Prci8g2381 513 SMART LRR_typ_2 143 167 IPR003591 -
Prci8g2381 513 SMART LRR_typ_2 334 358 IPR003591 -
Prci8g2381 513 SMART LRR_typ_2 286 310 IPR003591 -
Prci8g2381 513 SMART LRR_typ_2 262 285 IPR003591 -
Prci8g2381 513 SMART LRR_typ_2 215 239 IPR003591 -
Prci8g2381 513 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Prci8g2381 513 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 248 352 - -
Prci8g2381 513 Pfam Protein tyrosine and serine/threonine kinase 372 496 IPR001245 GO:0004672|GO:0006468
Prci8g2381 513 FunFam Leucine-rich repeat receptor protein kinase EMS1 160 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2381 Prci-Chr8 30561782 30588718 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2381 351 500 Receptor kinase-like Gene Family AT1G08590 30.864 4.21e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci8g2381 PK_Tyr_Ser-Thr 4.4e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2381 - K13420 pcin:129317447 797.734