Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2380 ATGGGAAATCTTTGCTTTCAATTCTCCTTGATCATGTTCTTCATGCTTTGTCTTGTGGTTTGCCCGTCTTTATGTCAATCCAATTTTACCCTAGATGGCTTGGCACTTCTTGCTTTTAAATCTTCTGTAAGGGACCCTTACAATCACTTGAAAAATTGGTCCAACTCCTCATCTTTTTGCAGCTGGTTTGGTGTCACATGCGATTCTAAAAGTGAGAGAGTGACAATCTTGAGCCTTTCTGAGATGGGTCTCGAGGGAACCTTACCTTCACAAATTGGAAATCTGTCCTTCTTAATAAACCTTGAACTACAAAGCAACAACTTTCATGGCAAATTGCCGAAAGAGTTGCTTCATTTGCACAAATTAGAAAAACTAAACTTGAGTTATAATAATTTTAGTGGAGAAATTCTAACTTGGATAGGAAGCTTGTTTATGCTTAAACATTTGAGTCTTGCCAATAATACTTTTGGAGGTATCATCCCTCCAAGTATATTCAATATGTCTAAGTTGGAGACCTTGGATTTGATGTCTAATTCTATCAACGGACCTATTCCATTTGATATTGGAAGACTTCAACACCTGAAATTTTTGCGCATTTCTAGAAACATTCTTTCAGGAAATATACCTCCAACTATCTCTAACTTATCATCACTTGAACACATCTCTTTGTCTCTCAACTTCTTAGAAGGACATATTCCCAAAGAAATGAATAAGCTTACAAAGCTGAAAAACATGTTCATGGGTATGAACAAGTTGTCTGGTCAAGTACCAAGCATTGGAAATTTGATCATGCTTGAAAATTTATATCTTGCAAGCAATAACCTCCAAGGGGATATTCCCAATGAAATAAGCAATCTTACAAATTTGAACAGCATAGACTTAAGTGGTAATCAATTGTCTGGTCACATACCAAGAGGCATTGGCAAGTTCACTTGGCTTCAAGAGTTATTTCTGGACAACAATAACTTCGAAGGAAATATTTCCAATGAAATTATAAGTCTCGCAAATCTGGAGATCATGAGCCTAAGTGTTAATCAGCTATCTGGCCCCATACCAAGAGGCATTGAAAGTTTGACTATGCTTCAACAATTGTATCTTGATAGCAATAATTTAGAAGAATACGGATTTGCAGGAATTGTTTCAACAAAAGCAGATGTGTATAGCTATGGAATAATACTAATGGAAGTGTTCACAAGGAAAAAACCAACAGAAGATATGTTCATCAATGGATTAAGCTTGAAGACTTGGATAAGTAAATCAATGCCCGATGCATTGATTCAAGTCATGGATTCCAGTTTACTACAAGCCAATGAACAACATGTTGGTAGCATTTTGACAACTACATCTGCTGTTTTTGAGTTGGCCTTGAATTGCTGCTCCGATTTTCCAACAGAACGTTGCAATATGTCAGATATTGTAGCATCATTGAACAAGATCAAGGATTTGTACTATGCAAAGAAGTCAAATTTAAATAAATACTAA 1482 0.3596 MGNLCFQFSLIMFFMLCLVVCPSLCQSNFTLDGLALLAFKSSVRDPYNHLKNWSNSSSFCSWFGVTCDSKSERVTILSLSEMGLEGTLPSQIGNLSFLINLELQSNNFHGKLPKELLHLHKLEKLNLSYNNFSGEILTWIGSLFMLKHLSLANNTFGGIIPPSIFNMSKLETLDLMSNSINGPIPFDIGRLQHLKFLRISRNILSGNIPPTISNLSSLEHISLSLNFLEGHIPKEMNKLTKLKNMFMGMNKLSGQVPSIGNLIMLENLYLASNNLQGDIPNEISNLTNLNSIDLSGNQLSGHIPRGIGKFTWLQELFLDNNNFEGNISNEIISLANLEIMSLSVNQLSGPIPRGIESLTMLQQLYLDSNNLEEYGFAGIVSTKADVYSYGIILMEVFTRKKPTEDMFINGLSLKTWISKSMPDALIQVMDSSLLQANEQHVGSILTTTSAVFELALNCCSDFPTERCNMSDIVASLNKIKDLYYAKKSNLNKY 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2380 493 FunFam Leucine-rich repeat receptor protein kinase EMS1 160 258 - -
Prci8g2380 493 FunFam Piriformospora indica-insensitive protein 2 279 375 - -
Prci8g2380 493 FunFam Leucine-rich repeat receptor-like kinase 33 147 - -
Prci8g2380 493 Gene3D Ribonuclease Inhibitor 33 144 IPR032675 -
Prci8g2380 493 Gene3D Ribonuclease Inhibitor 145 213 IPR032675 -
Prci8g2380 493 SUPERFAMILY RNI-like 73 380 - -
Prci8g2380 493 Gene3D Transferase(Phosphotransferase) domain 1 370 490 - -
Prci8g2380 493 SMART LRR_typ_2 143 167 IPR003591 -
Prci8g2380 493 SMART LRR_typ_2 358 378 IPR003591 -
Prci8g2380 493 SMART LRR_typ_2 286 310 IPR003591 -
Prci8g2380 493 SMART LRR_typ_2 262 285 IPR003591 -
Prci8g2380 493 SMART LRR_typ_2 215 239 IPR003591 -
Prci8g2380 493 SUPERFAMILY Protein kinase-like (PK-like) 373 481 IPR011009 -
Prci8g2380 493 PANTHER OS05G0588300 PROTEIN 164 282 - -
Prci8g2380 493 Pfam Protein tyrosine and serine/threonine kinase 377 476 IPR001245 GO:0004672|GO:0006468
Prci8g2380 493 Gene3D Ribonuclease Inhibitor 214 369 IPR032675 -
Prci8g2380 493 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Prci8g2380 493 Pfam Leucine rich repeat 313 371 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2380 Prci-Chr8 30561782 30588718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2380 373 480 Receptor kinase-like Gene Family AT1G08590 27.273 1.27e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci8g2380 PK_Tyr_Ser-Thr 2.7e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2380 - K13420 pcin:129317447 746.888