Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2361 ATGCGGTTTAACATAATTCTAGGAGTAGCTCGAGGGATGTTATATCTTCATCAAGATTCTAGATTAAGAGTAATTCATAGAGATTTGAAAATAAGTAACATTCTTCTGGATGAGGACATGCAACCAAAAATTTCAGATTTTGGCTTGGCAAGAATATTTGGAAACAAAGAAATTGAGGCCAACACTGAGAGAATAGTTGGAACCTATGGATATATGGCTCCAGAGTATGCATTAGATGGATTATTTTCAGTGAAATCAGATATTTTCAGCTTTGGTGTAGTGGTACTTGAAATTATTAGTGGAAAGAAGAACACAGGATTCTTCAAATCCAAACAAGTTCCTAGCCTTCTTGGTTATGCATGGAGGCTATGGACAGAGAATAAACTGTTGGATTTAATGGACCAGTCGTTCATTGAAAGCTGCAATGTGAATCAATTCATTAGGTGTGCGCAAGTGAGTCTGTTGTGTGTACAAGATGAACCAGGAGATAGGCCTACCATGTCGCAGGTAGTGATAATGCTTGAAAGTGAGACTGTAAGCCTCCCAACTCCGAAACAACCAACTTTTTTTATGAACAGAGACAGGGGCCTTTCAAATACTGCTTCTTCTTCTAGTAAACTTGAAGGAATTCTACCAACCGAGTCTTCCTATCAAGAGGGTCGATAG 666 0.3859 MRFNIILGVARGMLYLHQDSRLRVIHRDLKISNILLDEDMQPKISDFGLARIFGNKEIEANTERIVGTYGYMAPEYALDGLFSVKSDIFSFGVVVLEIISGKKNTGFFKSKQVPSLLGYAWRLWTENKLLDLMDQSFIESCNVNQFIRCAQVSLLCVQDEPGDRPTMSQVVIMLESETVSLPTPKQPTFFMNRDRGLSNTASSSSKLEGILPTESSYQEGR 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2361 221 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2361 221 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 205 - -
Prci8g2361 221 SMART serkin_6 2 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2361 221 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Prci8g2361 221 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 182 - -
Prci8g2361 221 MobiDBLite consensus disorder prediction 191 221 - -
Prci8g2361 221 Pfam Protein tyrosine and serine/threonine kinase 3 172 IPR001245 GO:0004672|GO:0006468
Prci8g2361 221 Gene3D Transferase(Phosphotransferase) domain 1 1 185 - -
Prci8g2361 221 SUPERFAMILY Protein kinase-like (PK-like) 2 197 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2361 Prci-Chr8 29805532 29807315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2361 2 191 Receptor kinase-like Gene Family AT4G23140 59.694 1.01e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci8g2361 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2361 - - pcin:129318677 439.884