Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2320 ATGGATTATTCCACATACCAACAACAACAACAACAGGAACAAGGCTATGAATCATCTCAAAATCAAGCCTTTGATCAATCTTCCCAGTCTTATTATGGTTACAATCAACAATATGACCAGCAATATGCATACTATGCTGGCCAAGGTCAAGGAAGTTCATATGCCCACCCACAATTCCAGCAAGAACACACCTCCATTCACCCTCCTGGAGTCCCAATACCTCCTGAACAGGCTCAGATTCAAAATCCACAATTTTCAAACCAAGATTCAGGCGCGGCACTAGGTGCTGCGATGAATCCAGCGGCTGCGGCTGTGGCGATAGCTGCTCTCTCACAGCTCACTCAATTTGCTGGGAACCCTCCGATTGGGCAGTCTCGATACAGAGGCGGCAGCAGGGGCAGTAGACCATTTAGACGGGGTGGTCGTGGCCATTTCAACCCACGAGGTCATGCTCCTTACCGTGGTGGGGGACGTGGCCATGGGGGTGGTAGGCACTTCCCATCTTATTCTTCAGAATTTGTACCAGCTGCTACCGGAGGCACATCGGTGGCACAACAACCTTCATCATCAGTATCTGGGCCTATTCTAGCACAGGTTCCAGATGTGACATTGCATCCACCACCATGTAAATTTTGGTGTGAAATTTGCAAGGTTGAGTGCAATTCTTCTGAGATTATGGAGCAGCATAAGAATGGAAAGCGGCATAAAAAGAATTTGCAGGTACACGAGGAGTTACAGAGGCGTAAAGCTGTAAATGGACAACAGAATAGCCAGATGCCCTCTTCTCAATTGAATTTAACTGCCCAGGTTGAGAAAGCTCCTGAATTGAAGACAGAAGGGTGCCCAGCTGATAATATGATCTCTGTAGTGATGGATGACAATCTTAAAAATGAACTTGATTTGCAGAACAATACAGGAGAAACTTCAGAAGTTACAGCTGATGATCCTGAGGAAAACCCCAGGGAAGGTTCGGCTTCAAGGGGCCATGGTTTCAAGCGAAAGATGAGAGGAGGCAGAGGAGGTAAATACATGAGAAATAATGAGGGGTCAAGAAAGAAAGTGGAACCTCCAAAACCCAAACAGGCTACATCTTTCATATGTGAGTTGTGCAATGTTATATGTGAGTCACAGGTTGTTTATGACAGTCATTTGACCGGGAAAAAGCATCAATCAAATCTCAAACGTGTCCACGGGCACCAAGCCATGTCCCAAGAACCAGGGCCACAGGCAGCTCCCCCAGCTAACATCAGTGCTGTGTCTAATTCCATTGACATCAATGCTCTTGCAAATTCAATTAACTCTCAAGTCCAACATGGTGTTAATGATCCACAAGTCCTCTTGGCTCAGCTCCTAATGACAGTACTTTCTCAAGCTCAAGCGTCAACAGCGGCAGCGGCAACCACAGGATCTGTAGCTGCTCAGCTTTCATCACTCATGCCAGCAGCTGGCTCAAGTTATGGACCACCATTTCAAAATATCCCACTGACACGAGCATCAGAAAGTGCTGCACATGGTAAAAGCTCTGAAATTGAAGAGGAGGTACATAAAACACCAGTAGAGAATCCAACCGCAACAATTGAGCAGGGACCCTGA 1593 0.4658 MDYSTYQQQQQQEQGYESSQNQAFDQSSQSYYGYNQQYDQQYAYYAGQGQGSSYAHPQFQQEHTSIHPPGVPIPPEQAQIQNPQFSNQDSGAALGAAMNPAAAAVAIAALSQLTQFAGNPPIGQSRYRGGSRGSRPFRRGGRGHFNPRGHAPYRGGGRGHGGGRHFPSYSSEFVPAATGGTSVAQQPSSSVSGPILAQVPDVTLHPPPCKFWCEICKVECNSSEIMEQHKNGKRHKKNLQVHEELQRRKAVNGQQNSQMPSSQLNLTAQVEKAPELKTEGCPADNMISVVMDDNLKNELDLQNNTGETSEVTADDPEENPREGSASRGHGFKRKMRGGRGGKYMRNNEGSRKKVEPPKPKQATSFICELCNVICESQVVYDSHLTGKKHQSNLKRVHGHQAMSQEPGPQAAPPANISAVSNSIDINALANSINSQVQHGVNDPQVLLAQLLMTVLSQAQASTAAAATTGSVAAQLSSLMPAAGSSYGPPFQNIPLTRASESAAHGKSSEIEEEVHKTPVENPTATIEQGP 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2320 530 MobiDBLite consensus disorder prediction 504 518 - -
Prci8g2320 530 Gene3D Classic Zinc Finger 204 244 - -
Prci8g2320 530 Gene3D Classic Zinc Finger 344 395 - -
Prci8g2320 530 MobiDBLite consensus disorder prediction 49 65 - -
Prci8g2320 530 SUPERFAMILY beta-beta-alpha zinc fingers 351 397 IPR036236 -
Prci8g2320 530 MobiDBLite consensus disorder prediction 305 359 - -
Prci8g2320 530 MobiDBLite consensus disorder prediction 314 329 - -
Prci8g2320 530 MobiDBLite consensus disorder prediction 493 530 - -
Prci8g2320 530 SMART ZnF_U1_5 362 396 IPR003604 GO:0003676|GO:0008270
Prci8g2320 530 SMART ZnF_U1_5 210 242 IPR003604 GO:0003676|GO:0008270
Prci8g2320 530 SUPERFAMILY beta-beta-alpha zinc fingers 210 242 IPR036236 -
Prci8g2320 530 MobiDBLite consensus disorder prediction 1 31 - -
Prci8g2320 530 MobiDBLite consensus disorder prediction 118 192 - -
Prci8g2320 530 PANTHER OS06G0651300 PROTEIN-RELATED 6 438 - -
Prci8g2320 530 MobiDBLite consensus disorder prediction 49 76 - -
Prci8g2320 530 Pfam Zinc-finger of C2H2 type 365 389 - -
Prci8g2320 530 Pfam Zinc-finger of C2H2 type 211 235 - -
Prci8g2320 530 MobiDBLite consensus disorder prediction 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2320 Prci-Chr8 29216741 29231645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2320 365 393 C2H2 Transcription Factor Family AT5G61190 58.621 9.76e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2320 - - mnt:21385224 355.91