Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2315 ATGGAAGTCACTAGCACCTACAATGGTGGTGGCATGATGTGGTTTTTTAAGGATAGAGGATTTGATGACCAAAGCATTCAAGGAATGTTCAGGAAGTGCAAGCGCCTTGAGGTTGTGCATCAAGAAAGAGCATCTGAAAATTGGGCCTATTTGATAAGCATTGGCATCCAAGAGAGGAAGCTCCCATCTATTGTTTCAAAATGTCCCAAGATTCTTACGCTTGGCCTTAATGAGAAGATAGTTCCCATGGTTGAGTGCCTCAAGACGCTGGGAACGAAACCCAGTGAAGTTGCTTCTGCCATAGCCAAGTTCCCTCATTTACTCTCACATAGTGTGGAAGAGAAGCTTTGTCCTCTTTTGGCCTTCTTTCAGGCACTGGGCATCCCTGATAAGCGACTTGGAAAAATAATACTGCTCAATCCAAGGCTTATCAGCTACAGCATTGAAACCAAGCTCACAGAAATTGTGGACTTCCTTGCTAGCCTTGGTCTTAATAAAGATGGAATGATTGGAAAAATTTTAGTGAGGAACCCATTTATTATGGGATATAGTGTTGATAAAAGACTCCGCCCTACTACTCAGTTTCTGAAGTTAATAGGTCTGACTGATCTCGAACTTATAGTGGTAGCTGTGAACTTCCCAGAAGTTTTGAGTAGAGATGTGAATAGGGTTTTGGAGCCCAATTATGCCTACTTAAAGAAATGTGGTTTTCGTGACAGAGAGATAGTTGCATTGGTAGTTGGGTTTCCTCCAATCCTGATCAAGAGCATCCAAAATTCTCTAGAACCCAAGATAAGGTTTCTAGTAGATGTGATGGGGAGACAAATCCACGAAGTTGTTGATTATCCTTGCTTCTTTCGTCATGGTCTGAAGAGAGAAATAGAGTTGCGGCACAGATTTCTAATGCGGAGTAACTTAAATTGTAGCTTGAGTGAAATGCTAGACTGTAATAAGAAGAAGTTCTTCTTAAAGTTTTGTTTATTAGAAGGAAATGCCTTGAGTAACCAGGTTTCATCCCACTTATAA 1026 0.4103 MEVTSTYNGGGMMWFFKDRGFDDQSIQGMFRKCKRLEVVHQERASENWAYLISIGIQERKLPSIVSKCPKILTLGLNEKIVPMVECLKTLGTKPSEVASAIAKFPHLLSHSVEEKLCPLLAFFQALGIPDKRLGKIILLNPRLISYSIETKLTEIVDFLASLGLNKDGMIGKILVRNPFIMGYSVDKRLRPTTQFLKLIGLTDLELIVVAVNFPEVLSRDVNRVLEPNYAYLKKCGFRDREIVALVVGFPPILIKSIQNSLEPKIRFLVDVMGRQIHEVVDYPCFFRHGLKREIELRHRFLMRSNLNCSLSEMLDCNKKKFFLKFCLLEGNALSNQVSSHL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2315 341 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Prci8g2315 341 Pfam mTERF 15 321 IPR003690 GO:0003690|GO:0006355
Prci8g2315 341 Gene3D Transcription termination factor 3, mitochondrial 92 329 IPR038538 -
Prci8g2315 341 PANTHER CGI-12 PROTEIN-RELATED 133 253 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci8g2315 mTERF 4.4e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2315 K15031 - gmx:100816929 545.814