Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2312 ATGAGAAGGAGCAGAGAACTTCTTCGCCTCTATATTTCTCTGCGCGATCTCATTACAAAGTCACCATCTTCTTCTACTCGTTCTTTTCCTGGGCTTGTTATTCCCTTCAGTTCCTCTTTCTCCTCAACCCTAAATGGCGAGGACGACAAAAGATCACCCAAGTCTCAAAGGGATTTGTTGCTTCTGGAAAAATTTAGACTTCGAAAACTCAAAGGCTCTTCTACAACTTCAGAGAAGATAATGGAAAAGAATTTGAAAGACGAGGATGAACGCACTGAGGTAGTGACCAATTTTAAGAAGTTGGGTTTGTGTGAGAAGCTTATTGAGGTTTTGGAGAAACTAGGCGTGCTTGTTCCTTCTGAGATTCAATGTGCGGGAATTCCTGCTGTTTTGGAAGGAAAGAGCGTGTTGATGAGTTCACTATCTGGTCATGACAGGACTTTGGCCTACTTGTTACCTCTTATTCAGCTTTTGAGACAAGATAGAAAGTTGTCCCATTCAAATTTGAAGCATCCCCGGGCAGTTGTGCTTTGTGCCACAGAGGAGAATGCTGAACAGTGCTTTAATGCTGCAAAATATATCATCCGTCATGCAGAATTCAAGTCTACAAAGAATGATGCTTCACTAAATAATGAGCAGTCAGACGTTTCAATTGGCCTTGTAATCGGATCTCCTAGTGAGATTCTTCAATACATTGAAGAGGGAACGGTTATTCCTGAAGAAATAAGATATTTGGTAATAGATGATGCAGACATCATGTTTGATAGTGACCTTGGCGGTGAAATTCATAAGATTATCAGACAATTACCAGATTATACTTCAAATTTCGCTACGGGAGGATTGCAAACTGTTCTGGTCACTTCAACATTAACGGAGGTTTGGTGTTGCATGTTATAG 897 0.4069 MRRSRELLRLYISLRDLITKSPSSSTRSFPGLVIPFSSSFSSTLNGEDDKRSPKSQRDLLLLEKFRLRKLKGSSTTSEKIMEKNLKDEDERTEVVTNFKKLGLCEKLIEVLEKLGVLVPSEIQCAGIPAVLEGKSVLMSSLSGHDRTLAYLLPLIQLLRQDRKLSHSNLKHPRAVVLCATEENAEQCFNAAKYIIRHAEFKSTKNDASLNNEQSDVSIGLVIGSPSEILQYIEEGTVIPEEIRYLVIDDADIMFDSDLGGEIHKIIRQLPDYTSNFATGGLQTVLVTSTLTEVWCCML 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2312 298 Gene3D - 63 294 IPR027417 -
Prci8g2312 298 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 127 298 IPR014001 -
Prci8g2312 298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 292 IPR027417 -
Prci8g2312 298 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 40 291 - -
Prci8g2312 298 SMART ultradead3 115 294 IPR014001 -
Prci8g2312 298 Pfam DEAD/DEAH box helicase 121 291 IPR011545 GO:0003676|GO:0005524
Prci8g2312 298 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 96 124 IPR014014 GO:0003724
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2312 Prci-Chr8 29065683 29068829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2312 93 290 Eukaryotic Initiation Factors Gene Family AT3G19760 23.267 2.35e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2312 - - qsa:O6P43_004140 294.278