Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2273 ATGGCAGAAATTGCAATAAACTTAGTGATTGATAAGTTGGTCCCACTTGTCTTGAATGAAGTAAAGCTCCACAGAGATGTGCCCAAACATATTAATTTCATCAAGCATCGGTTAAACTTGGTAAAAGCCTATTTAAAAGATGCAGATGAACAGGCTGAGAGGACAAGCGCAAGCTACCTGGTAAAAGAGTGGGTGAAACAAGTAAGAGAAATTGCTTTTCGCATAGAAGATGTGATTGATGAATGCTTGTTTAGTGAGACGAAAAAACGTGCTCGAAATCGCGAATTTATTGGAAGGGGTTTCTTTAAAACCATGTCTAGACATCAGATTAAGGACGAGATTGTGGCCATTGGAAATGCCCTAGACGATCTCTATAAAACAAGGGAGACTTTAGGGTTAAACTTATCGACAACAGAATTGATCCGTGGAGAGACCAGACCAGGATATGACCCTCGACAAGGTTCTCGTTTTATGGACGAGGCAGAGCTTGTAGGTATTAATGAAACCAAGCAAAGACTCATAGATTGGCTGTCGAGGGAAGAAGGGAGGAGCACGATAATTTCAGTGGTGGGCGAAGGAGGATTAGGTAAAACAACTATTGTGAATAACTTGTACGAGAAGCAAAAAAGATGGTTTGACTGCTGTGCTTGGATCACTGTCTCTCGGTCACTAGAAGGAGGACTATTAAGAAGTTTGACGCAAAGCTTGTGTGGGTGGGATGACATTAAAGAAGCTGACAAGAAGGTAGAGGCAGATAAAATGACTTCCAAATTGAGAGAATATCTGTTGGATAAAAAATATATGGTTGTCTTTGACGATGCATGGAACGAGTATTTTTGGGCACAAGTTAAGTTTGCATTACCACATAACGGCAAAGACAACAGGATAATGATTACCACAAGGAATAAACGGATCGCAAAGCTGTGTAGATTAGATCATGCTCAATTCTACATCCATGAGCTAAAACCCTTATCCCAGCAAGATGCTTTTAAGCTTTTTTCTCGTAAGGTCTTTGGGCCTTCTGATCATATTGAAGAAACTAATCCATTGATGAAGTTGTCTCAAGACTTTGTTAGCCGGTGCAACGGAGTTCCGTTTGCAATTGTAGCTATTGCTGGTCTTCTATCAACTAAACGAAGAGATGCCTTAACATGGGAAAAGGTGCGCGATAGCCTTAATCAAAAAATCACCAACGATCCTTCTTTAAAGGGTTATTTCGAGGTGATATTAGAAAGTTATGATGATCTTGATTACCACCTTAAGTTATGCCTCCTGTATTTCGGCCTTTTCCCTAAAGCCTACTCCATTAGCTCCACAAGACTCATTAATTTGTGGATAGCAGAAGGATTTGTGAAAAGAAATTCAAATGACGATCCACGAACGATTGAGGAAGTGGCAGGAGAATACTTAGAGGAACTAATTCATCGAAGCTTGGTCAAAGTGTCGGCAGAGTATTCTGATGGCAGAGTTCGAAGATGTCATATCCATGATCTCATGCACACATTTGTTCTCAACAAAGGTATGGATCAGAACTTTTGCCAGGTGATCAGACCTAATCACTCATTTGATCTCTTTACACGGTCTAGGCGCCTATCCATCCTCGCGCCTCTTGACATTCCAAGTGCTAAAAATTATGATACAGTGAAGTCTTGCTTTGTTTTCAAGTCACAACAGTTGGAAAAGCCTCTTTTGCAATCATTCTTGTCCCATTTCAAGCTCTTGATAGCCTTGGACTTTGAAGGTGCGCCTCTCGATCATCTTCCTAAAGCTGTTGAGAATTTGTTCCTTTTGAAGTATCTAAATCTGCGAAAGACGCAGGTTAAGACCATTCCTAAGTTCATTGGCAATCTTCTTAATTTGGAGATTCTGGACCTGAAGCATACGCTGGTGATTGAATTGTCAGCATCCATTTACCATCTCATCCGCCTGCGACATCTCATAGCATATTCTTCTTATGGGGTGCAATTGAAGAAAGGAATATCTTGTTTGAACGCTCTACAGAAGCTGACCAAAGTTGATGTCTCTAATGAGGGTGGTGTCATCGAAGAATTGATTCATTTGACGCAAATGAGGAAGCTAGGAATCATCAACTTGAAGAGGAAGAATGGGAAATCATTGTGCCGTGCAATCCAAGAGATGAAGCATTTGTGTTCTTTGAGTATTGTGGCTTTTGGAAAGAATGAAGTTCTTGATTTGCCGTCAATAACTAAGCCTCCTCGATACTTGCAGCGTATCAACTTTGATGGTCCTTTAGAGAAATTACCGAATTGGATTCCTAAACTTAGACATCTAGTGAAGCTGCGTTTGGCCAGATCACGACTACGAGAAAACAAGGACTTGTTGTATGATCTGAAGGACTTGACAGAGTTAGTGGATCTTTCTCTCTTGCGAACATATGAAGGCGAAGAGTTGCATTTTAAAGCTGAATGGTTTAAGAAGCTCAAGGTTCTTACTTTACAATCCATGGATAGATTGAAGATTATAAGAGTAGAGGAAGGAGCAATGCCTTTGCTTGAAGATCTACACTTGGGGTTTTGCCCTCAAATGATACGTCTGCCTGACGATGTCGAAAAACTTAATGTTCTCAAAAGTATTTATCTTGCAGGAATGTCTGATGAATTCCAAGAGAGAATGGTGAAAAAAGATTTCTCTATATCCCCCAACTTATCATCGGTGACTTACAAGCTGGATGGTCACAATCTCCGTATTTATCCTTGA 2718 0.4043 MAEIAINLVIDKLVPLVLNEVKLHRDVPKHINFIKHRLNLVKAYLKDADEQAERTSASYLVKEWVKQVREIAFRIEDVIDECLFSETKKRARNREFIGRGFFKTMSRHQIKDEIVAIGNALDDLYKTRETLGLNLSTTELIRGETRPGYDPRQGSRFMDEAELVGINETKQRLIDWLSREEGRSTIISVVGEGGLGKTTIVNNLYEKQKRWFDCCAWITVSRSLEGGLLRSLTQSLCGWDDIKEADKKVEADKMTSKLREYLLDKKYMVVFDDAWNEYFWAQVKFALPHNGKDNRIMITTRNKRIAKLCRLDHAQFYIHELKPLSQQDAFKLFSRKVFGPSDHIEETNPLMKLSQDFVSRCNGVPFAIVAIAGLLSTKRRDALTWEKVRDSLNQKITNDPSLKGYFEVILESYDDLDYHLKLCLLYFGLFPKAYSISSTRLINLWIAEGFVKRNSNDDPRTIEEVAGEYLEELIHRSLVKVSAEYSDGRVRRCHIHDLMHTFVLNKGMDQNFCQVIRPNHSFDLFTRSRRLSILAPLDIPSAKNYDTVKSCFVFKSQQLEKPLLQSFLSHFKLLIALDFEGAPLDHLPKAVENLFLLKYLNLRKTQVKTIPKFIGNLLNLEILDLKHTLVIELSASIYHLIRLRHLIAYSSYGVQLKKGISCLNALQKLTKVDVSNEGGVIEELIHLTQMRKLGIINLKRKNGKSLCRAIQEMKHLCSLSIVAFGKNEVLDLPSITKPPRYLQRINFDGPLEKLPNWIPKLRHLVKLRLARSRLRENKDLLYDLKDLTELVDLSLLRTYEGEELHFKAEWFKKLKVLTLQSMDRLKIIRVEEGAMPLLEDLHLGFCPQMIRLPDDVEKLNVLKSIYLAGMSDEFQERMVKKDFSISPNLSSVTYKLDGHNLRIYP 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2273 905 Gene3D - 153 317 IPR027417 -
Prci8g2273 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 427 IPR027417 -
Prci8g2273 905 Gene3D Ribonuclease Inhibitor 542 902 IPR032675 -
Prci8g2273 905 Gene3D - 419 506 IPR036388 -
Prci8g2273 905 FunFam Probable disease resistance protein At1g63360 413 505 - -
Prci8g2273 905 CDD RX-CC_like 2 124 IPR038005 -
Prci8g2273 905 PANTHER DISEASE RESISTANCE PROTEIN RP 62 838 IPR044974 GO:0006952
Prci8g2273 905 SUPERFAMILY L domain-like 496 871 - -
Prci8g2273 905 Gene3D - 323 417 IPR042197 -
Prci8g2273 905 Gene3D - 4 114 - -
Prci8g2273 905 PRINTS Disease resistance protein signature 186 201 - -
Prci8g2273 905 PRINTS Disease resistance protein signature 361 375 - -
Prci8g2273 905 PRINTS Disease resistance protein signature 615 631 - -
Prci8g2273 905 PRINTS Disease resistance protein signature 261 275 - -
Prci8g2273 905 Pfam NB-ARC domain 168 414 IPR002182 GO:0043531
Prci8g2273 905 Pfam Rx N-terminal domain 5 93 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2273 Prci-Chr8 27921034 27933662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2273 159 415 WRKY Transcription Factor Family AT4G12020 25.287 1.38e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2273 K13457 - gmx:100782327 627.476