Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2224 ATGGGCCGCTCTCGCGTCGCGTCGCGCCAACCTGACGATGACCCCAACCAAAGATCCAAGAGGAAAAAGGCAGCTTTGAATGCAGAGAATTTAGAAACTTTAAGTATAGGCCATGGAATAAGTGAAGGGAAAGTGTCTCTTTACCATTGTAATTATTGTGACAAAGATATTTCCGGGAAGATCCGCATTAAGTGTGCTGTTTGTCAAGATTTTGATCTCTGTGTGGAGTGCTTCTCTGTCGGAGCTGAGGTGACACCTCACAAGAGCAATCATCTGTATAGGGTTATGGATAATCTATCTTTTCCATTGCTATGTTCAGACTGGAATGTGGATGAAGAGATGCTACTGCTAGAGGGTATTGGAATGTATGGATTTGGCAATTGGGCTGAAGTAGCAGGATGTGTTGGAACAAAAAGCAAGTCTGAATGTATTGACCACTATAATGCTTTTTACATGAATTCACCATGCTTTCCCCTCCCTGATTTGTCTCGTGTTATGGGAAAGAGTCGAGAGGAGCTCCTTGCTATGGTCAAGGAGTGTGGTGATGTTAAGAAAGAACTTTCTCCAAATGCAGAGCTTACACTGAAAGAAGAGCCTCATTTTTCTGCAGGAATAAACTCAGAGGAATCTAAAAAGGAAGAACCAACTAATCAAACATTGTGTGGCTTAACTTCAGGTGCTGATATGGGTTCTGTCCCTGCCAAGGCTTACTCAAGTTCAAATAAGAAGGCTTCCAATACTAACCAGATTAATAACCGGCTTAAAATGGAAGTGGAGTCTCAAGTGGATCGAAGGATTGGAGAGAAAAAACCCAAGTTATATGGGGACGATGGGCCTTCTGTGATAGAGTTGAGTGGATACAATTTTAAGAGAGAAGAATTTGAGATTGAATATGATAATGATGCAGAACAAGTATTGGCTGATATGGAATTCAAGGACACTGATACTGAAGCTGAACGTTCATTGAAACTACAAGTTCTCCATATATACTTAAAAAGGTTAGATGAACGAAAGCGGAGAAAGAATTTTATCCTTGAAAGAAATTTGCTTTATGCTGACCCTTTTGAGAAACCTCTCACACCTGAAGAGCTACAAATGTGTCAGCGCTACAGGGTCTTTGCACGGTTTCACTCAAAAGAAGAGCACAAGGAGTTTCTCAGAAGTATTATTGAAGAGCATCGTATTGTCAAACGAATACAAGATCTCCAGGAAGCCCGAGCTGCTGGATGTTGCCTATCTGCTGATGCATATAGATTTATTGATCTCAAGAGGACAAAGGAAGCTGAACAAAGTGCCTTCAAAGAGACTGCCAAGAATACGCTTGCTGCGACACAAGAATTCTCAGGGTCCCTAGATGATTGGGATGTCTCTGGAATTATGGGGGTTGAGTTATTATCAGAATCTGAGAAAGAACTTTGTAATGAGATCAGAATTCTACCGTCACACTATCTCAACATGTTGCAGATCATGACACTAGAAATTTCTAAGGGCAGTATGACTAAGAAATCTGATGCATATATCTTGTTCAATGTAGAACCGAGCAAGGTTGATAGAGTTTATGATATGCTTGTGAAAAAGGGGATTGCTCCAACTTGA 1596 0.4098 MGRSRVASRQPDDDPNQRSKRKKAALNAENLETLSIGHGISEGKVSLYHCNYCDKDISGKIRIKCAVCQDFDLCVECFSVGAEVTPHKSNHLYRVMDNLSFPLLCSDWNVDEEMLLLEGIGMYGFGNWAEVAGCVGTKSKSECIDHYNAFYMNSPCFPLPDLSRVMGKSREELLAMVKECGDVKKELSPNAELTLKEEPHFSAGINSEESKKEEPTNQTLCGLTSGADMGSVPAKAYSSSNKKASNTNQINNRLKMEVESQVDRRIGEKKPKLYGDDGPSVIELSGYNFKREEFEIEYDNDAEQVLADMEFKDTDTEAERSLKLQVLHIYLKRLDERKRRKNFILERNLLYADPFEKPLTPEELQMCQRYRVFARFHSKEEHKEFLRSIIEEHRIVKRIQDLQEARAAGCCLSADAYRFIDLKRTKEAEQSAFKETAKNTLAATQEFSGSLDDWDVSGIMGVELLSESEKELCNEIRILPSHYLNMLQIMTLEISKGSMTKKSDAYILFNVEPSKVDRVYDMLVKKGIAPT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2224 531 SMART zz_5 44 89 IPR000433 GO:0008270
Prci8g2224 531 ProSiteProfiles SWIRM domain profile. 445 531 IPR007526 GO:0005515
Prci8g2224 531 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Prci8g2224 531 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 48 526 - -
Prci8g2224 531 Gene3D - 42 95 IPR043145 -
Prci8g2224 531 SMART sant 104 153 IPR001005 -
Prci8g2224 531 PIRSF Txn_adaptor_ADA2 37 450 IPR016827 GO:0003713|GO:0006357|GO:0035065
Prci8g2224 531 PIRSF Txn_adaptor_ADA2 435 530 IPR016827 GO:0003713|GO:0006357|GO:0035065
Prci8g2224 531 MobiDBLite consensus disorder prediction 1 21 - -
Prci8g2224 531 Gene3D - 102 153 - -
Prci8g2224 531 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Prci8g2224 531 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Prci8g2224 531 FunFam Transcriptional adapter 41 96 - -
Prci8g2224 531 MobiDBLite consensus disorder prediction 204 225 - -
Prci8g2224 531 CDD ZZ_ADA2 48 96 IPR041983 -
Prci8g2224 531 Gene3D - 448 529 IPR036388 -
Prci8g2224 531 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Prci8g2224 531 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Prci8g2224 531 SUPERFAMILY Homeodomain-like 100 154 IPR009057 -
Prci8g2224 531 ProSiteProfiles Myb-like domain profile. 106 151 IPR001005 -
Prci8g2224 531 FunFam Transcriptional adapter 2 448 530 - -
Prci8g2224 531 SUPERFAMILY RING/U-box 48 110 - -
Prci8g2224 531 CDD SANT 108 148 IPR001005 -
Prci8g2224 531 SUPERFAMILY Homeodomain-like 450 528 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2224 Prci-Chr8 26429268 26446796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2224 1 529 EF-hand Containing Proteins AT3G07740 53.509 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci8g2224 Myb_DNA-binding 4.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2224 K11314 - gmx:100779424 739.954