Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2198 ATGGCTTATGGATTGGTCAAGGAAGTTGATAATCTTCGCAAAACAACCTTCGACACAATTTCTGATGGTATGCGGCCAATGTCGATGGATTTTATTTTACCTGGCAGTGGTTTTGTGAGTTTCAAATCAAGACATGAAGTTACGAAGAAAGTTATGGATATGTTGAATGATTCTAAGGTAAGAATAATTGGGGTCTATGGACTAGGAGGGGTGGGAAAAACCACTTTTGTTAAAAAGGTGGCTAGAAAAGCTATAAATGATAAGTTGTTTGACATGGTGGTCTTCGCACATGTGACAAGTACTCCAGACATAAAGAAAATCCAAAGTGAACTAGCTGATCAATTGGGCGTAAGATTTGATAAGGATAGTGAGATTGGAAGAGCAAGCCGCTTGCAAGATATATTTAACAATGAAAAGAAGAATACTCTTGTGATCCTAGATGATTTATGGGTTAGATTGGACTTGAACAAGCTGGGGATTCCAGTGGATGGTGCCAACCCTAGCTCAAAATCTGTTGAGGGAATTTACAATTTCAAAATGTCCAAAGATGAAGTTACAAATGATTCCAAGAGATTCAAAATTTTGCTCACTTCAAGAGACAGGGAGGTCTTGTCTGGTAAAATGGAGTTGAAAGACAACTCAATTTTCTCTCTAAAAGGCTTGCAGGACGAGGAAGCAGAGATTTTGTTTAAGAAGGTCACTAGAGTGAATGAAAAATCTCATGACTTTCAACAATTAGCCATTACAATTTCAAAGAAGTGTGGTGGATTACCGATAACAATTATCACAGTTGGAAGAACACTAAGAACAAAAAACTACATTGAGTGGAAGGATGCACTTGGACAACTTGAAAGGAAAAACTTTATTGGGGTGGATGAATCTCTACATTTCTCAACAAAATTGAGCTTTTATTATTTGGAAAATGAGGATCTGAAGTCTACTTTCTTGCTTTGTGCTCAATTGGGTCATCATCCCCTTATTATGGAGTTGGTGAAGTATTGCATTGGTTTGGGCATATTTAAAGGGTTTCTTTCAATTAGGAAAACTCGTGAAAAAATACTCACATTGATTAAAAGGCTCAAAGACTCAAGTTTGTTGGTGAATAGTTATTCTAATGATTATTTCAACATGCATGATGTAATTTGTGATGCTGCCTTGTCAATAGCATATGAGGATCAACATATTTTGACCATGCGAAATGAGAAACTAAGTGAGTGGCCTCATAGCAATGAATTTGAGATGTACAATGCTATATCTATACACAACTGTGATACCCATGATGAGCTTCCAAATTTTGTGAGTTGTCCTAAACTCAAAATGTTCCATATTGATAGTCTTGATCCTTCTTTTAGACTACCAGATAACTTTTTCAATACAATGGGCATACTCAAAGCATTGATATTGACTTGTGTTGATCTATCAAATTCACTCACTTTAATTAGTTGCCTAACAAACTTGAGAATGCTTTGTTTAGAGCAATGCATGTTAGGTGACATATCCTTCATAGGAGAGATGAAGAAATTGAGGATTCTCAGCCTCTCAAGATCTAATATTCAAAGTCTTCCAGCTACAATAGGACAATTATGTAAATTGCAATTGCTTGACATAAGTAATTGCATTGAACTTAGAGAGATTCCACCTAATGTGTTGTCAGGTTTGACTAATTTAGAAGAATTGTATATGACAAATAGTGTGAAGTGGAAGAGTGAAGGAAATCGAAGTGGAAATGCTATTCTTGCTGAATTGAGGTATCTACATCAATTGAAGAGTCTAGATATATGCATACTAGATGCTGCCTCTTTGCCATGGAACTTGTTCCTTGACAACTTGGATAGCTACAAGATTGTCATTGGAAATTTCAAAACTCTTTCTGTGGGAGATTTCAACATGTCAAATAAGGATGAAAACTCAAGGGCATTGGCATTGCAAATAAAAGAAAGGAACCACATTCACACTCATAAAGCCATTAAACTATTATTTAAAAAAGTAGAGAAATTGTTATTGGGAGAAGTAGGTGTTCAGAATATTTTCTAG 2034 0.3574 MAYGLVKEVDNLRKTTFDTISDGMRPMSMDFILPGSGFVSFKSRHEVTKKVMDMLNDSKVRIIGVYGLGGVGKTTFVKKVARKAINDKLFDMVVFAHVTSTPDIKKIQSELADQLGVRFDKDSEIGRASRLQDIFNNEKKNTLVILDDLWVRLDLNKLGIPVDGANPSSKSVEGIYNFKMSKDEVTNDSKRFKILLTSRDREVLSGKMELKDNSIFSLKGLQDEEAEILFKKVTRVNEKSHDFQQLAITISKKCGGLPITIITVGRTLRTKNYIEWKDALGQLERKNFIGVDESLHFSTKLSFYYLENEDLKSTFLLCAQLGHHPLIMELVKYCIGLGIFKGFLSIRKTREKILTLIKRLKDSSLLVNSYSNDYFNMHDVICDAALSIAYEDQHILTMRNEKLSEWPHSNEFEMYNAISIHNCDTHDELPNFVSCPKLKMFHIDSLDPSFRLPDNFFNTMGILKALILTCVDLSNSLTLISCLTNLRMLCLEQCMLGDISFIGEMKKLRILSLSRSNIQSLPATIGQLCKLQLLDISNCIELREIPPNVLSGLTNLEELYMTNSVKWKSEGNRSGNAILAELRYLHQLKSLDICILDAASLPWNLFLDNLDSYKIVIGNFKTLSVGDFNMSNKDENSRALALQIKERNHIHTHKAIKLLFKKVEKLLLGEVGVQNIF 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2198 677 Pfam Leucine rich repeat 507 563 IPR001611 GO:0005515
Prci8g2198 677 Pfam NB-ARC domain 188 296 IPR002182 GO:0043531
Prci8g2198 677 Pfam NB-ARC domain 49 163 IPR002182 GO:0043531
Prci8g2198 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 318 IPR027417 -
Prci8g2198 677 Gene3D - 34 212 IPR027417 -
Prci8g2198 677 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 9 671 - -
Prci8g2198 677 Gene3D Ribonuclease Inhibitor 376 655 IPR032675 -
Prci8g2198 677 SUPERFAMILY L domain-like 377 610 - -
Prci8g2198 677 Gene3D - 220 303 IPR042197 -
Prci8g2198 677 SMART AAA_5 59 221 IPR003593 GO:0016887
Prci8g2198 677 PRINTS Disease resistance protein signature 62 77 - -
Prci8g2198 677 PRINTS Disease resistance protein signature 254 268 - -
Prci8g2198 677 PRINTS Disease resistance protein signature 136 150 - -
Prci8g2198 677 PRINTS Disease resistance protein signature 526 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2198 Prci-Chr8 25761010 25778151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2198 60 271 WRKY Transcription Factor Family AT5G45050 24.651 1.92e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2198 - - pcin:129318262 1327.38