Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2178 ATGGCAGAGGTGGGAGTGTCGGTGGCAGCAAAACTTGCTGAATATTTGGTAGATCCAACTTTACGACAGTTGCAATATTTGTTCTGTGTCAGAAAAATCACCACAAATGTTGAGATCGATAAGGAGGAGCTCATACTCAAGCAAGGGAGAGTGAAAGAACGTGTTCAAGAGGCCATTAACAGGACTGACAGAATTGATGATGTGGTTAAAAAGTGGATGAATGATGTGAAAAGCCTGATAGCAGAGATGGAGAATTTGGAGGAAGAGCTAAAGGCCAACAATGGCTGCCTTCGACAGTGGTGTCCTACTTGGAAGAGATATTGTCTTTGCAAAAAGTTGGCCAAGACAACTCAAAGAATGATAGACCTAAATGCAAAGAGTGATCATTTTAATCCATTTTCTCATCCTATTATTGCTCTAGATATAGAGTACCACTCTTCTCAAAATTTTGAGTTCTTCAACTCTACAAAAATGGCTTTTGATCAATTGTGGAAGGCGTTGCAACAAGATGGCAACTTCATAATTGGGCTATGGGGTATGGGTGGTTCAGGGAAAACTACCTTGGCAACAGAAGTAGGAAAGAAAGCCAAAGAGTCAAAGCTATTTGATCGAGTTGTGAAAACTACGATTTCTCAAAGCTTGGATATGAGAAGAGCTCAAGGTGAAATTGCCGACATGTTGGGACTTAAATTGGAGGAAGAATCTAACACTGGAAGGGCAAAAAGAATAGCACTAAGATTACAAAGTGGAGAAAGAACTTTGATAATATTAGATGATGTATGGGCTAAGCTGAACCTTGAGGACATAGGGATTCCTATTGAGGGAAATCATCAAAAAAGTTGCAAAATTGTCCTAACCACACGGCGCCTAGAAGTATGTATTTTGATGGGTTGCCAAAAGGAGATTCAACTTCAGTTGTTACAAGAAAATGAAGCTTGGGCTTTGTTTCAAGCTCATGCTAATGTGGATGATGCAGCTCAAGAAGTTGTGGCACAAGCAATTGCTAAGGAATGTAAGGGGCTACCCATTGCAATTATAGCTATGGGAACTTGCTTGAAAAGAAAAGGTGTTGATGAGATGAAAGTAATGCTGGACAGGTTAAGGAATGCGAAACCAAACAATGTGGACAAAGGTGTGAGAGATGTTTTTGCTTGTCTTGAATTAAGTTATGATTATTTGGCAATGCCAGAAGCCAAGCTGCTATTGATAATGTGTGCTATGTTTCCAGAAGATCATAAAATTGACATTGAGATCTTTTTAGATATGGAGTGGGGTTAG 1278 0.3967 MAEVGVSVAAKLAEYLVDPTLRQLQYLFCVRKITTNVEIDKEELILKQGRVKERVQEAINRTDRIDDVVKKWMNDVKSLIAEMENLEEELKANNGCLRQWCPTWKRYCLCKKLAKTTQRMIDLNAKSDHFNPFSHPIIALDIEYHSSQNFEFFNSTKMAFDQLWKALQQDGNFIIGLWGMGGSGKTTLATEVGKKAKESKLFDRVVKTTISQSLDMRRAQGEIADMLGLKLEEESNTGRAKRIALRLQSGERTLIILDDVWAKLNLEDIGIPIEGNHQKSCKIVLTTRRLEVCILMGCQKEIQLQLLQENEAWALFQAHANVDDAAQEVVAQAIAKECKGLPIAIIAMGTCLKRKGVDEMKVMLDRLRNAKPNNVDKGVRDVFACLELSYDYLAMPEAKLLLIMCAMFPEDHKIDIEIFLDMEWG 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2178 425 Gene3D - 144 304 IPR027417 -
Prci8g2178 425 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 419 - -
Prci8g2178 425 FunFam Probable disease resistance protein At1g61300 143 301 - -
Prci8g2178 425 Gene3D - 306 393 IPR042197 -
Prci8g2178 425 PRINTS Disease resistance protein signature 338 352 - -
Prci8g2178 425 PRINTS Disease resistance protein signature 174 189 - -
Prci8g2178 425 PRINTS Disease resistance protein signature 247 261 - -
Prci8g2178 425 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Prci8g2178 425 Pfam NB-ARC domain 160 391 IPR002182 GO:0043531
Prci8g2178 425 Coils Coil 69 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2178 Prci-Chr8 25605766 25614114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2178 175 408 WRKY Transcription Factor Family AT5G45050 27.273 4.88e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2178 - - pcin:129318402 842.032