Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2176 ATGAATGATGTGAAAAGCCTGATAGCAGAGATGGAGAATTTGGAGGAAGAGCTAAAGGCCAACAATGGCTGCCTTCGACAGTGGTGTCCTACTTGGAAGAGATATTGTCTTTGCAAAAAGTTGGCCAAGACAACTCAAAGAATGATAGACCTAAATGCAAAGAGTGATCATTTTAATCCATTTTCTCATCCTATTATTGCTCTAGATATAGAGTACCACTCTTCTCAAAATTTTGAGTTCTTCAACTCTACAAAAATGGCTTTTGATCAATTGTGGAAGGCGTTGCAACAAGATGGCAACTTCATAATTGGGCTATGGGGTATGGGTGGTTCAGGGAAAACTACCTTGGCAACAGAAGTAGGAAAGAAAGCCAAAGAGTCAAAGCTATTTGATCGAGTTGTGAAAACTACGATTTCTCAAAGCTTGGATATGAGAAGAGCTCAAGGTGAAATTGCCGACATGTTGGGACTTAAATTGGAGGAAGAATCTAACACTGGAAGGGCAAAAAGAATAGCACTAAGATTACAAAGTGGAGAAAGAACTTTGATAATATTAGATGATGTATGGGCTAAGCTGAACCTTGAGGACATAGGGATTCCTATTGAGGGAAATCATCAAAAAAGTTGCAAAATTGTCCTAACCACACGGCGCCTAGAAGTATGTATTTTGATGGGTTGCCAAAAGGAGATTCAACTTCAGTTGTTACAAGAAAATGAAGCTTGGGCTTTGTTTCAAGCTCATGCTAATGTGGATGATGCAGCTCAAGAAGTTGTGGCACAAGCAATTGCTAAGGAATGTAAGGGGCTACCCATTGCAATTATAGCTATGGGAACTTGCTTGAAAAGAAAAGGTGTTGATGAGATGAAAGTAATGCTGGACAGGTTAAGGAATGCGAAACCAAACAATGTGGACAAAGGTGTGAGAGATGTTTTTGCTTGTCTTGAATTAAGTTATGATTATTTGGCAATGCCAGAAGCCAAGCTGCTATTGATAATGTGTGCTATGTTTCCAGAAGATCATAAAATTGACATTGAAGATCTTTTTAGATATGGAGTGGGGTTAGGCCTATGTAGAGATCTAAACTCATTTGAAATAGCAAGAAGACATGTTAAAGCAGCCATAAATAGTCTCATTGACTCCTCACTATTGATTATGCATTCTCCAGAGATCAACAAACATGAGCAAGAATATGTGACAATGCATGACATGGTTCGCGATGTAGCTTTGTGGATAGCATCTAAACAGGATCATACGATTAAGGTAAACTATACAAAAGAGCTGAATGAATTTCTTGATAATGAAGCAATAAAAGATTTCTATGCTATAGCTTCATGGTATGACTTGATGGATTACTTCAATTTCCTTCTCGATTGGATGCTCCAAAGCTTGAGATTTTTGTTTGATTCATCAACAACCTTTGATTTATCACTTGCATCATTTGAAGGTACAAAAGAACTCAAGGTTTTTGCTGTGATTCATAGATATAGCTATCCTTCTCTGATGAAAAAGCCTCAATCAATCCAACAATTGTCTAATCTTCGAACCCTAGGTTGCAACATGGGATTTAGGTGA 1572 0.3791 MNDVKSLIAEMENLEEELKANNGCLRQWCPTWKRYCLCKKLAKTTQRMIDLNAKSDHFNPFSHPIIALDIEYHSSQNFEFFNSTKMAFDQLWKALQQDGNFIIGLWGMGGSGKTTLATEVGKKAKESKLFDRVVKTTISQSLDMRRAQGEIADMLGLKLEEESNTGRAKRIALRLQSGERTLIILDDVWAKLNLEDIGIPIEGNHQKSCKIVLTTRRLEVCILMGCQKEIQLQLLQENEAWALFQAHANVDDAAQEVVAQAIAKECKGLPIAIIAMGTCLKRKGVDEMKVMLDRLRNAKPNNVDKGVRDVFACLELSYDYLAMPEAKLLLIMCAMFPEDHKIDIEDLFRYGVGLGLCRDLNSFEIARRHVKAAINSLIDSSLLIMHSPEINKHEQEYVTMHDMVRDVALWIASKQDHTIKVNYTKELNEFLDNEAIKDFYAIASWYDLMDYFNFLLDWMLQSLRFLFDSSTTFDLSLASFEGTKELKVFAVIHRYSYPSLMKKPQSIQQLSNLRTLGCNMGFR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2176 523 Gene3D - 318 409 IPR036388 -
Prci8g2176 523 PRINTS Disease resistance protein signature 266 280 - -
Prci8g2176 523 PRINTS Disease resistance protein signature 102 117 - -
Prci8g2176 523 PRINTS Disease resistance protein signature 175 189 - -
Prci8g2176 523 Pfam NB-ARC domain 88 319 IPR002182 GO:0043531
Prci8g2176 523 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 2 518 - -
Prci8g2176 523 Gene3D - 234 317 IPR042197 -
Prci8g2176 523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 327 IPR027417 -
Prci8g2176 523 Coils Coil 1 24 - -
Prci8g2176 523 Gene3D - 72 232 IPR027417 -
Prci8g2176 523 FunFam Probable disease resistance protein At1g61300 72 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2176 Prci-Chr8 25445495 25448058 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2176 103 491 WRKY Transcription Factor Family AT5G45050 24.020 6.44e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2176 - - pcin:129317503 1043.49