Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2157 ATGCTAGTCTCCACATTATGTTGGGCACACAAGCAAAGAACTCTGAAACAAATTAGGGAAAGAAATTTTGAGCAAAATGGAGGAAACATGCTGCTACAAAGACTTTCACAACAACAAGGATACACTGACAGAACCAAAATATTTACACAAGTTGAGCTTCAAAATGCCACAAACAACTTTGATGAAGATAGAATCCTTGGTCGTGGGGGGCAAGGCACAGTTTATAAGGGTGTATTACCTGACAACATGCTAATTGCTATTAAGAAGTCCAAAGTAGGAGGGGATCCTAGACAAATTAAGGATTTTATCAATGAAGTGGTTGTGCTTTCCCAAATCAATCATCGGAATGTGGAGAAACTTTTGGGGTGTTGTCTTGAAACCGATGTTCCTTTGTTAGTCTATGAGTTTGTGGATAATGGCACCCTTCTTGACCACATTGACCCATTAAAGAATGAATGCTCTATTTCATGGGAGACTAGATTAAAGATAGCTGTAGAAACTGCTGAAGCCATTTCATATTTGCATTCTGCAACTTCTATTCCAATTATTCATCGAGATATAAAATCTACCAACATATTACTAGACCACAATCATAGAGCAAAGGTGTCAGACTTCGGTGCTTCAAGACTTGTCCCTCTTGATGAAACTCAAGTTACCACGATGGTGCAAGGAACACTTGGATACTTGGATCCAGAGTATCTCCACACTGGTTAG 714 0.3922 MLVSTLCWAHKQRTLKQIRERNFEQNGGNMLLQRLSQQQGYTDRTKIFTQVELQNATNNFDEDRILGRGGQGTVYKGVLPDNMLIAIKKSKVGGDPRQIKDFINEVVVLSQINHRNVEKLLGCCLETDVPLLVYEFVDNGTLLDHIDPLKNECSISWETRLKIAVETAEAISYLHSATSIPIIHRDIKSTNILLDHNHRAKVSDFGASRLVPLDETQVTTMVQGTLGYLDPEYLHTG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2157 237 Pfam Protein kinase domain 61 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2157 237 FunFam Wall-associated receptor kinase 2 30 136 - -
Prci8g2157 237 ProSiteProfiles Protein kinase domain profile. 60 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2157 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Prci8g2157 237 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 237 IPR045274 GO:0007166
Prci8g2157 237 SMART serkin_6 60 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2157 237 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Prci8g2157 237 SUPERFAMILY Protein kinase-like (PK-like) 39 237 IPR011009 -
Prci8g2157 237 Gene3D Transferase(Phosphotransferase) domain 1 137 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2157 Prci-Chr8 25016982 25018015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2157 1 237 Receptor kinase-like Gene Family AT1G21250 61.088 4.95e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Prci8g2157 Pkinase 3.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2157 - - pcin:129293718 388.267