Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2151 ATGTCTGCAATAGAACTTGAAAATAGAAACCTAATTATTGCTTCTTCATCATTTCCTAGAAGAAGCTCTTCCTTTGAAGAGGCTTCATCTCTAAATCATGACAAAGGGAAGCTCTCAGTTGTAAGAAGTAAGGTGTTTAGTAGCATAAAAGTGGTGGTCCTCTCTGCCAAAATAAACGTACTCATGCCCTTCGGCCCTTTGGCTATTTTGCTTGATAAGTTGTTTCATAATCATGCAATTGGTTTGTTTTACGGGACCTACAGAAGCATCCATTGTAATCTTAGAAGGGTAAGTGCTAGCTTTGATATTTTTCTGAGGATTTTGATTTTTAAAATTGGGAGTCTTTTGAATGCCACATTTGGAAATGCAACTGAGCTGATCATATCAATACATGCCCTCAAAAGTGGCTTGATTCGTGTTGTTCAGCAATCACTGTTAGGTTCAATTCTGTCAAATCTATTGCTAGTTCTTGGAAGTGCATTCTTTGCTGGTGGGCTAGTGTTTTATGACAGAGAACAAATATTTAACAAAGCAGATGCTACAGTAGATTTTGGGCTGCTTTTGATGGCTGTAATGGGCTTGTTATTTCCATCAGTTCTTCATTCTACAAATACAGAAGCTATTAATTGGAAGTCTGAGTTGGCTCTTTCAAGATTTACTAGCTGTATTATGCTTGTGGCTTATGCTTCTTATATAGCATTCCAACTCAACGGGCGTAAGAATGCACAAGCTCCAGTGGATGATGAGGAAAGGGGTCTGAGTGAAGTGGATTCAGCTGATGCAGAGGCTCCTGAGATTTCTATGTGGGAATCAATAATCTGGTTGTCTATCTTGACAGTGTGGATATCAATCCTGTCAGAATATTTGGTTAACACCATAGAGGGGGCATCGGAAGACTTGAAAATACCCATACCATTTATTAGTGTTATTCTTCTCCCTATAGTTGGGAATGCCACGGAACATGTCGGCACTATTATATTTGCTGTGAAAGACAAGCTAGACATATCTCTTGGAGTGGCTATAGGTTCTTCTATTCAAATATCCTTGTTTGTGATTCCTTTTTGTGTGGTTACGGGTTGGATAGTTGGGCGCCCAATGGACTTGAATTTTCAACTTTTTGAGACAACTTCTCTCTTCATAGCTGTTGTGATTGTTGCTTTCATGCTTCATAATGGAACATCCAACTACTTAAAAGGATTGATGCTTATTCTTTGCTACTTGATTGTGGCGGCAAGTTATTTTGTACATGTTGATCCTCCTTCAATACAAACATAG 1275 0.3867 MSAIELENRNLIIASSSFPRRSSSFEEASSLNHDKGKLSVVRSKVFSSIKVVVLSAKINVLMPFGPLAILLDKLFHNHAIGLFYGTYRSIHCNLRRVSASFDIFLRILIFKIGSLLNATFGNATELIISIHALKSGLIRVVQQSLLGSILSNLLLVLGSAFFAGGLVFYDREQIFNKADATVDFGLLLMAVMGLLFPSVLHSTNTEAINWKSELALSRFTSCIMLVAYASYIAFQLNGRKNAQAPVDDEERGLSEVDSADAEAPEISMWESIIWLSILTVWISILSEYLVNTIEGASEDLKIPIPFISVILLPIVGNATEHVGTIIFAVKDKLDISLGVAIGSSIQISLFVIPFCVVTGWIVGRPMDLNFQLFETTSLFIAVVIVAFMLHNGTSNYLKGLMLILCYLIVAASYFVHVDPPSIQT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2151 424 FunFam Vacuolar cation/proton exchanger 110 249 - -
Prci8g2151 424 Gene3D - 257 414 IPR044880 -
Prci8g2151 424 Gene3D - 110 249 IPR044880 -
Prci8g2151 424 NCBIfam calcium/proton exchanger 110 414 IPR004798 GO:0006816|GO:0015369
Prci8g2151 424 Pfam Sodium/calcium exchanger protein 272 410 IPR004837 GO:0016020|GO:0055085
Prci8g2151 424 Pfam Sodium/calcium exchanger protein 111 236 IPR004837 GO:0016020|GO:0055085
Prci8g2151 424 NCBIfam calcium/proton exchanger 45 414 - -
Prci8g2151 424 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 33 419 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci8g2151 424 FunFam Vacuolar cation/proton exchanger 259 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2151 Prci-Chr8 24450404 24467458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2151 5 419 Antiporters AT1G55730 59.809 6.84e-164 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2151 K07300 - qsu:112036201 497.278