Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2147 ATGAAGAGGATTACCTCGATGGGTTCTGCAGATGGAATGTCTGCAATAGAACTTGAAAATAGAAACCTAATTATTGCTTCTTCATCATTTCCTAGAAGAAGCTCTTCCTTTGAAGAGGCTTCATCTCTAAATCATGACAAAGGGAAGCTCTCAGTTGTAAGAAGTAAGGTGTTTAGTAGCATAAAAGTGGTGGTCCTCTCTGCCAAAATAAACGTACTCATGCCCTTCGGCCCTTTGGCTATTTTGCTTGATAAGTTGTTTCATAATCATGGTTTGGTCTTTCTTTCTAGCCTTTTGGGCATATTACCTTTGGCTGAACGTTTAGGATATACAACCGAGCAATTGGTTTGTTTTACGGGACCTACAGTTGGGAGTCTTTTGAATGCCACATTTGGAAATGCAACTGAGCTGATCATATCAATACATGCCCTCAAAAGTGGCTTGATTCGTGTTGTTCAGCAATCACTGTTAGGTTCAATTCTGTCAAATCTATTGCTAGTTCTTGGAAGTGCATTCTTTGCTGGTGGGCTAGTGTTTTATGACAGAGAACAAATATTTAACAAAGCAGATGCTACAGTAGATTTTGGGCTGCTTTTGATGGCTGTAATGGGCTTGTTATTTCCATCAGTTCTTCATTCTACAAATACAGAAGCTATTAATTGGAAGTCTGAGTTGGCTCTTTCAAGATTTACTAGCTGTATTATGCTTGTGGCTTATGCTTCTTATATAGCATTCCAACTCAACGGGCGTAAGAATGCACAAGCTCCAGTGGATGATGAGGAAAGGGGTCTGAGTGAAGTGGATTCAGCTGATGCAGAGGCTCCTGAGATTTCTATGTGGGAATCAATAATCTGGTTGTCTATCTTGACAGTGTGGATATCAATCCTGTCAGAATATTTGGTTAACACCATAGAGGGGGCATCGGAAGACTTGAAAATACCCATACCATTTATTAGTGTTATTCTTCTCCCTATAGTTGGGAATGCCACGGAACATGTCGGCACTATTATATTTGCTGTGAAAGACAAGCTAATTCCTTTTTGTGTGGTTACGGGTTGGATAGTTGGGCGCCCAATGGACTTGAATTTTCAACTTTTTGAGACAACTTCTCTCTTCATAGCTGTTGTGATTGTTGCTTTCATGCTTCATAATGGAACATCCAACTACTTAAAAGGATTGATGCTTATTCTTTGCTACTTGATTGTGGCGGCAAGTTATTTTGTACATGTTGATCCTCCTTCAATACAAACATAG 1254 0.3963 MKRITSMGSADGMSAIELENRNLIIASSSFPRRSSSFEEASSLNHDKGKLSVVRSKVFSSIKVVVLSAKINVLMPFGPLAILLDKLFHNHGLVFLSSLLGILPLAERLGYTTEQLVCFTGPTVGSLLNATFGNATELIISIHALKSGLIRVVQQSLLGSILSNLLLVLGSAFFAGGLVFYDREQIFNKADATVDFGLLLMAVMGLLFPSVLHSTNTEAINWKSELALSRFTSCIMLVAYASYIAFQLNGRKNAQAPVDDEERGLSEVDSADAEAPEISMWESIIWLSILTVWISILSEYLVNTIEGASEDLKIPIPFISVILLPIVGNATEHVGTIIFAVKDKLIPFCVVTGWIVGRPMDLNFQLFETTSLFIAVVIVAFMLHNGTSNYLKGLMLILCYLIVAASYFVHVDPPSIQT 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2147 417 NCBIfam calcium/proton exchanger 74 344 IPR004798 GO:0006816|GO:0015369
Prci8g2147 417 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 412 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci8g2147 417 FunFam Vacuolar cation/proton exchanger 121 260 - -
Prci8g2147 417 Pfam Sodium/calcium exchanger protein 283 343 IPR004837 GO:0016020|GO:0055085
Prci8g2147 417 Pfam Sodium/calcium exchanger protein 92 247 IPR004837 GO:0016020|GO:0055085
Prci8g2147 417 Gene3D - 268 407 IPR044880 -
Prci8g2147 417 Gene3D - 121 260 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2147 Prci-Chr8 24449742 24467458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2147 13 412 Antiporters AT3G13320 59.857 1.99e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2147 K07300 - qsu:112036201 532.717