Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2146 ATGAAGAGGATTACCTCGATGGGTTCTGCAGATGGAATGTCTGCAATAGAACTTGAAAATAGAAACCTAATTATTGCTTCTTCATCATTTCCTAGAAGAAGCTCTTCCTTTGAAGAGGCTTCATCTCTAAATCATGACAAAGGGAAGCTCTCAGTTGTAAGAAGTAAGGTGTTTAGTAGCATAAAAGTGGTGGTCCTCTCTGCCAAAATAAACGTACTCATGCCCTTCGGCCCTTTGGCTATTTTGCTTGATAAGTTGTTTCATAATCATGCAATTGGTTTGTTTTACGGGACCTACAGAAGCATCCATTGTAATCTTAGAAGGGTAAGTGCTAGCTTTGATATTTTTCTGAGGATTTTGATTTTTAAAATTGGGAGTCTTTTGAATGCCACATTTGGAAATGCAACTGAGCTGATCATATCAATACATGCCCTCAAAAGTGGCTTGATTCGTGTTGTTCAGCAATCACTGTTAGGTTCAATTCTGTCAAATCTATTGCTAGTTCTTGGAAGTGCATTCTTTGCTGGTGGGCTAGTGTTTTATGACAGAGAACAAATATTTAACAAAGCAGATGCTACAGTAGATTTTGGGCTGCTTTTGATGGCTGTAATGGGCTTGTTATTTCCATCAGTTCTTCATTCTACAAATACAGAAGCTATTAATTGGAAGTCTGAGTTGGCTCTTTCAAGATTTACTAGCTGTATTATGCTTGTGGCTTATGCTTCTTATATAGCATTCCAACTCAACGGGCGTAAGAATGCACAAGCTCCAGTGGATGATGAGGAAAGGGGTCTGAGTGAAGTGGATTCAGCTGATGCAGAGGCTCCTGAGATTTCTATGTGGGAATCAATAATCTGGTTGTCTATCTTGACAGTGTGGATATCAATCCTGTCAGAATATTTGGTTAACACCATAGAGGGGGCATCGGAAGACTTGAAAATACCCATACCATTTATTAGTGTTATTCTTCTCCCTATAGTTGGGAATGCCACGGAACATGTCGGCACTATTATATTTGCTGTGAAAGACAAGCTAATTCCTTTTTGTGTGGTTACGGGTTGGATAGTTGGGCGCCCAATGGACTTGAATTTTCAACTTTTTGAGACAACTTCTCTCTTCATAGCTGTTGTGATTGTTGCTTTCATGCTTCATAATGGAACATCCAACTACTTAAAAGGATTGATGCTTATTCTTTGCTACTTGATTGTGGCGGCAAGTTATTTTGTACATGTTGATCCTCCTTCAATACAAACATAG 1257 0.3898 MKRITSMGSADGMSAIELENRNLIIASSSFPRRSSSFEEASSLNHDKGKLSVVRSKVFSSIKVVVLSAKINVLMPFGPLAILLDKLFHNHAIGLFYGTYRSIHCNLRRVSASFDIFLRILIFKIGSLLNATFGNATELIISIHALKSGLIRVVQQSLLGSILSNLLLVLGSAFFAGGLVFYDREQIFNKADATVDFGLLLMAVMGLLFPSVLHSTNTEAINWKSELALSRFTSCIMLVAYASYIAFQLNGRKNAQAPVDDEERGLSEVDSADAEAPEISMWESIIWLSILTVWISILSEYLVNTIEGASEDLKIPIPFISVILLPIVGNATEHVGTIIFAVKDKLIPFCVVTGWIVGRPMDLNFQLFETTSLFIAVVIVAFMLHNGTSNYLKGLMLILCYLIVAASYFVHVDPPSIQT 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2146 418 FunFam Vacuolar cation/proton exchanger 122 261 - -
Prci8g2146 418 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 413 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci8g2146 418 Pfam Sodium/calcium exchanger protein 123 248 IPR004837 GO:0016020|GO:0055085
Prci8g2146 418 Pfam Sodium/calcium exchanger protein 284 344 IPR004837 GO:0016020|GO:0055085
Prci8g2146 418 Gene3D - 269 408 IPR044880 -
Prci8g2146 418 Gene3D - 122 261 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2146 Prci-Chr8 24449739 24467458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2146 17 413 Antiporters AT1G55730 56.220 1.05e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2146 K07300 - qsu:112036201 471.085