Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2144 ATGAAGAGGATTACCTCGATGGGTTCTGCAGATGGAATGTCTGCAATAGAACTTGAAAATAGAAACCTAATTATTGCTTCTTCATCATTTCCTAGAAGAAGCTCTTCCTTTGAAGAGGCTTCATCTCTAAATCATGACAAAGGGAAGCTCTCAGTTGTAAGAAGTAAGGTGTTTAGTAGCATAAAAGTGGTGGTCCTCTCTGCCAAAATAAACGTACTCATGCCCTTCGGCCCTTTGGCTATTTTGCTTGATAAGTTGTTTCATAATCATGCAATTGGTTTGTTTTACGGGACCTACAGAAGCATCCATTGTAATCTTAGAAGGGTAAGTGCTAGCTTTGATATTTTTCTGAGGATTTTGATTTTTAAAATTGGGAGTCTTTTGAATGCCACATTTGGAAATGCAACTGAGCTGATCATATCAATACATGCCCTCAAAAGTGGCTTGATTCGTGTTGTTCAGCAATCACTGTTAGGTTCAATTCTGTCAAATCTATTGCTAGTTCTTGGAAGTGCATTCTTTGCTGGTGGGCTAGTGTTTTATGACAGAGAACAAATATTTAACAAAGCAGATGCTACAGTAGATTTTGGGCTGCTTTTGATGGCTGTAATGGGCTTGTTATTTCCATCAGTTCTTCATTCTACAAATACAGAAGCTATTAATTGGAAGTCTGAGTTGGCTCTTTCAAGATTTACTAGCTGTATTATGCTTGTGGCTTATGCTTCTTATATAGCATTCCAACTCAACGGGCGTAAGAATGCACAAGCTCCAGTGGATGATGAGGAAAGGGGTCTGAGTGAAGTGGATTCAGCTGATGCAGAGGCTCCTGAGATTTCTATGTGGGAATCAATAATCTGGTTGTCTATCTTGACAGTGTGGATATCAATCCTGTCAGAATATTTGGTTAACACCATAGAGGGGGCATCGGAAGACTTGAAAATACCCATACCATTTATTAGTGTTATTCTTCTCCCTATAGTTGGGAATGCCACGGAACATGTCGGCACTATTATATTTGCTGTGAAAGACAAGCTAGACATATCTCTTGGAGTGGCTATAGGTTCTTCTATTCAAATATCCTTGTTTGTGATTCCTTTTTGTGTGGTTACGGGTTGGATAGTTGGGCGCCCAATGGACTTGAATTTTCAACTTTTTGAGACAACTTCTCTCTTCATAGCTGTTGTGATTGTTGCTTTCATGCTTCATAATGGAACATCCAACTACTTAAAAGGATTGATGCTTATTCTTTGCTACTTGATTGTGGCGGCAAGTTATTTTGTACATGTTGATCCTCCTTCAATACAAACATAG 1311 0.389 MKRITSMGSADGMSAIELENRNLIIASSSFPRRSSSFEEASSLNHDKGKLSVVRSKVFSSIKVVVLSAKINVLMPFGPLAILLDKLFHNHAIGLFYGTYRSIHCNLRRVSASFDIFLRILIFKIGSLLNATFGNATELIISIHALKSGLIRVVQQSLLGSILSNLLLVLGSAFFAGGLVFYDREQIFNKADATVDFGLLLMAVMGLLFPSVLHSTNTEAINWKSELALSRFTSCIMLVAYASYIAFQLNGRKNAQAPVDDEERGLSEVDSADAEAPEISMWESIIWLSILTVWISILSEYLVNTIEGASEDLKIPIPFISVILLPIVGNATEHVGTIIFAVKDKLDISLGVAIGSSIQISLFVIPFCVVTGWIVGRPMDLNFQLFETTSLFIAVVIVAFMLHNGTSNYLKGLMLILCYLIVAASYFVHVDPPSIQT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2144 436 Gene3D - 269 426 IPR044880 -
Prci8g2144 436 Gene3D - 122 261 IPR044880 -
Prci8g2144 436 FunFam Vacuolar cation/proton exchanger 122 261 - -
Prci8g2144 436 NCBIfam calcium/proton exchanger 122 426 IPR004798 GO:0006816|GO:0015369
Prci8g2144 436 FunFam Vacuolar cation/proton exchanger 271 427 - -
Prci8g2144 436 NCBIfam calcium/proton exchanger 57 426 - -
Prci8g2144 436 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 43 431 IPR004713 GO:0006812|GO:0008324|GO:0016020
Prci8g2144 436 Pfam Sodium/calcium exchanger protein 123 248 IPR004837 GO:0016020|GO:0055085
Prci8g2144 436 Pfam Sodium/calcium exchanger protein 284 422 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2144 Prci-Chr8 24449672 24467458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2144 17 431 Antiporters AT1G55730 59.809 5.90e-164 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2144 K07300 - qsu:112036201 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci8g2144 8 24449672 24467458 Prci8g2144 8 24449672 24467458 ECH