Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2135 ATGCCAAGGAGGATTTCTTATTTTGAAATTTTGGATGCAACTCATAGATTTGATGAGAAAATCTTACTTGGAAGGGGAAGTTTTGGGTCTGTGTTCAAAGGAAAACTTTCAAATGGAATAATGGTGGTTGTTAAAATATTCAGTTTTGACACAGAAGCATTGTCCAGGAGCTTTAAGGTAGAATGCAATGCAATGCATAATTTGTGCCATTGCAATCTAGTAAAGCTCATTAGTAGTTCTTCTAATGCTGATTTGAACTGTTTGATAATGGAGCTCATTCCCAATGGAAGCCTTGAAAAATGGTTATATTTTGATAACTATCATTTGGATTTTCTACAAAGGTTGAATATAATGAGAAATGTAGCATCTCCTTTAGAATATCTTCATTATGGCTTATCAACACCAGTAGTCCAATGTGATTTGAAACCAAGTAACATTTTGTTGGATGATAATATGATTGCCCATGTGAGTGACTTTAGATTTGCCAAATTTTTAGACAAAGGGAAATCTAAGACACTTACCGAGACAATATCTACAATCGGTTATATTGCACCAGCAAAAGTAGATGTGTATAGCTATGGAATAGTACTGATGGAAGTGTTCACAAGGAAAAAGCCAACAGAGGGCATGTTTGTTGATGGATTAAGCTTAAAGACTTGGATAAGTCAATCAACGTCACATGCATTGATTCAAGTCACGGATTCCAGTATACCGATGGAACCAATGGACCGGCGTACAAGTCAAGTTGATGTTCTTGGGGATTTCGGCATCATAGTTCTTCTAGCTGTCAAAGGGTCTTCTAAGTATGGCGCAGTCATGATCTGGGACAGGTTCTACGATGGCCAAAGTGGATATAGCAAAGCCATTAAAGATAATGTCTAA 882 0.3685 MPRRISYFEILDATHRFDEKILLGRGSFGSVFKGKLSNGIMVVVKIFSFDTEALSRSFKVECNAMHNLCHCNLVKLISSSSNADLNCLIMELIPNGSLEKWLYFDNYHLDFLQRLNIMRNVASPLEYLHYGLSTPVVQCDLKPSNILLDDNMIAHVSDFRFAKFLDKGKSKTLTETISTIGYIAPAKVDVYSYGIVLMEVFTRKKPTEGMFVDGLSLKTWISQSTSHALIQVTDSSIPMEPMDRRTSQVDVLGDFGIIVLLAVKGSSKYGAVMIWDRFYDGQSGYSKAIKDNV 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2135 293 Gene3D Transferase(Phosphotransferase) domain 1 93 258 - -
Prci8g2135 293 SUPERFAMILY Protein kinase-like (PK-like) 3 224 IPR011009 -
Prci8g2135 293 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 238 - -
Prci8g2135 293 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Prci8g2135 293 ProSitePatterns Protein kinases ATP-binding region signature. 23 45 IPR017441 GO:0005524
Prci8g2135 293 SMART serkin_6 17 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2135 293 Pfam Protein kinase domain 20 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2135 293 ProSiteProfiles Protein kinase domain profile. 17 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2135 Prci-Chr8 24176088 24180760 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2135 3 237 Receptor kinase-like Gene Family AT3G47570 37.121 4.20e-48 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci8g2135 Pkinase 2.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2135 - K13420 pcin:129317492 587.415