Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2130 ATGGCGCTTGATGCTGATGGAGTTGGGTGGTCTTCAAGCTCTTGTGGATCAAATAAGAGATGGAAATATGATGTGTTCATGAGTTTTCGAGGTGAAGATACTCGCACAAGCTTTACTGATCATTTGCATGATGCTTTAATACGCCAAGGATTAAGAACTTTCAGGGATGAAGAAGGACTTGAAAGGGGACAATATATTAACCCAAGTTTACTTCAAGCAATTGAAGAATCTCGTTCTGCAATTGTTGTGCTCTCCCCAGGATATGCTTCTTCAACATGGTGTTTGGATGAGCTCCAAAAGATCCTTCATTCAAAAAAAGAGTTGGGTCTTCAAGTATTTCCAATCTTTTACTGTGTAGATCCATCTGATGTGAGGAAACAAAAGGGAAATTTTGCAGAAGCATTCATGAAACATGAAGGAAGATTTACGCAAGACAATATGAAGGTGCAAATATGGAGGGAGGCTTTAGAAGAAGTTGCTAGCATATCTGGTTGGGATTCCCGAAATAAGCATGAAACAAAATTCATTGAAACCATTGCTAAAGAAATTATGTCTAAGTTACTTGATGACTCGCCATCTGACCTTAGTGTATTAGTTGGAATTGAATCAAAATTAGATGAGTTGGAGTCAGTCATAGCAAGTGATTCAAAGGGAGTTCGATCTATAGGAATTTGGGGAACAGGAGGCTTAGGAAAAACTACTCTTGCAAGAGCTTTTTACGAGCGAAAATGCAAAGACTTTGAAGTTTGTTGCTTTCTTCATAATATCAGAGAGGTATTTGAAAAAGGTGGTTTAATTTCATTGCAAAGAAAACTTCTTTTTTCTTTGAATAAGAGAAGTGTAGAAGTGGATGATTGTTATGAAGGAATGAAGTTGATAAAAAACATGGTGGGAGATAGAAAAATTCTACTAGTCCTTGATGATGTGAGTAAGATAAGCCAACTTGAATATTTGGCTCGAGAGCAAGGATGGTTTGGCAATGGGAGTAGAATATTAATAACAACAAGAGATATGCATTTGTTATCATCATATGATGTATCTACTCAGTATAACATCAAATTCTTGAGTGACGACCAGTCCCTTCAACTTTTCCGTCAAAATGCTTTTAAAGGAAAAAATCAACCAAATGAAGGTTACTTAAAGCTTTCTAAAAATGTGATAAAGTATGCTGGAGGCCTTCCTTTGGCTCTCAAAGTGTTAGGTTCATTTCTTTGTGGAAGAACTATAGAGGAATGGAAGGATGCACTTGCCAAGTTCAAGAAGGTTCCTCCAAAGGACATGCTGAAGATACTTGAAGTGAGTTTTGACGGATTAGATGATAAGGAGAAGACTATATTCTTGGATGTTGCTTGCTTTTTCAATGGGATGGCCAAAGATTATGTCATTCAAATTTTAGAAACATTTGATGAAGACCTTCACCCAAAATTTGGAATAAAGGTTCTTACTGAGAAATCACTGCTAGTAATTAATCACGAAGGGCATTTGTGGGTGCATGATATTCTTCAAGATATGGGTAAATATATTGTTCTTCAAGAATCACCTAATGACGCTAGTAAGCGTTCTAGGACATTGTCTTTGAAGGATGCCAATGATATCCTAAAAAGAAATAAGGGTACAAGAGCAATTCGAGGTATTGCTCTAACATTAGAAAAATCATTTGATGCACTTTGGGATCCTAAAGCCTTCTCAAAGATGAGTAATCTCAAGTTACTTACCATTTCAAGTTCCTCATCACATGTTTCTCGTTGCCAATTGAATCTTCCTGGTGGACTTAAATCTCTTCCCAATGAATTGAGAGTTTTTGAATGGGAGGGGTATCCTTTTGATTATCTGCCCAGACATACTCAACTTGATAAACTTGTTCATCTAAAAATGCAACATAGCAAGTTAAAACAACTTTGGAGAGGCACACAGTCTCTACAAAGGCTGATGTCCATTGATTTATCTCATTCAAAATACCTCATCAAAACTCCAGATTTTGATAGAATTCCTAATCTTGAGATATTGATTCTAGAAGGGTGTTCTAACCTTGTTGAAATTCACCAGTCTCTTGGGCAACACAAGAATCTTGTCACTGTTAATTTGAAAGGCTGCACAAAAGTTAAATCCCTTACAAGAAAATTTGAGATGGATTGCTTACAGACTTTTGTTCTATCCGGTTGTTTAAAAATTAGAAAACTTCCTGAGTTTGGAAAGGATATGAAATGTCTCTCTAAGCTTAATTTAGAGGGCACTGCTATATCCAAACTACCTGAATCACTGGGCAATTTGATTGATCTTGCTGAACTAAATTTGTCAGGTTGCAAAAATCTGGCTTGCCTTTCGAATAATGTTTGCAAAAATAAGATTATCACAATTTCTGGTTCGTCAAAGCTTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGGCTTTGGAAGTGCTTGATGTGGGTCATCAAATTTCTAAAGAGGCACAATCAATTTGTGAATACAATGGTCGAGCACATTCTTCAATGTCATGGAGTAGCTTCTCCCTTCTCAGGAAGGCATTTGGGCTTCAAAGGCCTTCAAGCTTCGATGTATTGGTCTCGTTGATTGCCCAATGCTTAAGTCCTTGCCACAACTTCCGTCAAATCTGTCAGTTATTTGGGCAAATGGTTGTCCATCAATGGAACATTACATATTTTCGCAGAAGCTATGGGAGTTCATTGAATCATTCCAATCTCAGGTTCATAATATCAGTGACGTCTTAA 2733 0.3707 MALDADGVGWSSSSCGSNKRWKYDVFMSFRGEDTRTSFTDHLHDALIRQGLRTFRDEEGLERGQYINPSLLQAIEESRSAIVVLSPGYASSTWCLDELQKILHSKKELGLQVFPIFYCVDPSDVRKQKGNFAEAFMKHEGRFTQDNMKVQIWREALEEVASISGWDSRNKHETKFIETIAKEIMSKLLDDSPSDLSVLVGIESKLDELESVIASDSKGVRSIGIWGTGGLGKTTLARAFYERKCKDFEVCCFLHNIREVFEKGGLISLQRKLLFSLNKRSVEVDDCYEGMKLIKNMVGDRKILLVLDDVSKISQLEYLAREQGWFGNGSRILITTRDMHLLSSYDVSTQYNIKFLSDDQSLQLFRQNAFKGKNQPNEGYLKLSKNVIKYAGGLPLALKVLGSFLCGRTIEEWKDALAKFKKVPPKDMLKILEVSFDGLDDKEKTIFLDVACFFNGMAKDYVIQILETFDEDLHPKFGIKVLTEKSLLVINHEGHLWVHDILQDMGKYIVLQESPNDASKRSRTLSLKDANDILKRNKGTRAIRGIALTLEKSFDALWDPKAFSKMSNLKLLTISSSSSHVSRCQLNLPGGLKSLPNELRVFEWEGYPFDYLPRHTQLDKLVHLKMQHSKLKQLWRGTQSLQRLMSIDLSHSKYLIKTPDFDRIPNLEILILEGCSNLVEIHQSLGQHKNLVTVNLKGCTKVKSLTRKFEMDCLQTFVLSGCLKIRKLPEFGKDMKCLSKLNLEGTAISKLPESLGNLIDLAELNLSGCKNLACLSNNVCKNKIITISGSSKLSRMPEDLNENGALEVLDVGHQISKEAQSICEYNGRAHSSMSWSSFSLLRKAFGLQRPSSFDVLVSLIAQCLSPCHNFRQICQLFGQMVVHQWNITYFRRSYGSSLNHSNLRFIISVTS 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2130 910 Gene3D Ribonuclease Inhibitor 709 884 IPR032675 -
Prci8g2130 910 Gene3D Ribonuclease Inhibitor 550 708 IPR032675 -
Prci8g2130 910 Gene3D - 354 439 IPR042197 -
Prci8g2130 910 Pfam TIR domain 22 200 IPR000157 GO:0007165
Prci8g2130 910 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 794 IPR044974 GO:0006952
Prci8g2130 910 SUPERFAMILY L domain-like 548 820 - -
Prci8g2130 910 Gene3D - 15 186 IPR035897 -
Prci8g2130 910 Pfam NB-ARC domain 206 422 IPR002182 GO:0043531
Prci8g2130 910 Pfam Leucine Rich Repeat 619 638 IPR011713 -
Prci8g2130 910 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 165 IPR035897 -
Prci8g2130 910 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 448 IPR027417 -
Prci8g2130 910 PRINTS Disease resistance protein signature 221 236 - -
Prci8g2130 910 PRINTS Disease resistance protein signature 296 310 - -
Prci8g2130 910 PRINTS Disease resistance protein signature 638 654 - -
Prci8g2130 910 PRINTS Disease resistance protein signature 390 404 - -
Prci8g2130 910 SMART till_3 22 162 IPR000157 GO:0007165
Prci8g2130 910 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Prci8g2130 910 SUPERFAMILY "Winged helix" DNA-binding domain 427 513 IPR036390 -
Prci8g2130 910 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Prci8g2130 910 Gene3D - 187 352 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2130 Prci-Chr8 23974851 23981573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2130 23 824 WRKY Transcription Factor Family AT4G12020 29.951 4.75e-97 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2130 - - pcin:129318967 1387.86