LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci8g2129	ATGGCGCTTGATGCTGATGGAGTTGGGTGGTCTTCAAGCTCTTGTGGATCAAATAAGAGATGGAAATATGATGTGTTCATGAGTTTTCGAGGTGAAGATACTCGCACAAGCTTTACTGATCATTTGCATGATGCTTTAATACGCCAAGGATTAAGAACTTTCAGGGATGAAGAAGGACTTGAAAGGGGACAATATATTAACCCAAGTTTACTTCAAGCAATTGAAGAATCTCGTTCTGCAATTGTTGTGCTCTCCCCAGGATATGCTTCTTCAACATGGTGTTTGGATGAGCTCCAAAAGATCCTTCATTCAAAAAAAGAGTTGGGTCTTCAAGTATTTCCAATCTTTTACTGTGTAGATCCATCTGATGTGAGGAAACAAAAGGGAAATTTTGCAGAAGCATTCATGAAACATGAAGGAAGATTTACGCAAGACAATATGAAGGTGCAAATATGGAGGGAGGCTTTAGAAGAAGTTGCTAGCATATCTGGTTGGGATTCCCGAAATAAGCATGAAACAAAATTCATTGAAACCATTGCTAAAGAAATTATGTCTAAGTTACTTGATGACTCGCCATCTGACCTTAGTGTATTAGTTGGAATTGAATCAAAATTAGATGAGTTGGAGTCAGTCATAGCAAGTGATTCAAAGGGAGTTCGATCTATAGGAATTTGGGGAACAGGAGGCTTAGGAAAAACTACTCTTGCAAGAGCTTTTTACGAGCGAAAATGCAAAGACTTTGAAGTTTGTTGCTTTCTTCATAATATCAGAGAGGTATTTGAAAAAGGTGGTTTAATTTCATTGCAAAGAAAACTTCTTTTTTCTTTGAATAAGAGAAGTGTAGAAGTGGATGATTGTTATGAAGGAATGAAGTTGATAAAAAACATGGTGGGAGATAGAAAAATTCTACTAGTCCTTGATGATGTGAGTAAGATAAGCCAACTTGAATATTTGGCTCGAGAGCAAGGATGGTTTGGCAATGGGAGTAGAATATTAATAACAACAAGAGATATGCATTTGTTATCATCATATGATGTATCTACTCAGTATAACATCAAATTCTTGAGTGACGACCAGTCCCTTCAACTTTTCCGTCAAAATGCTTTTAAAGGAAAAAATCAACCAAATGAAGGTTACTTAAAGCTTTCTAAAAATGTGATAAAGTATGCTGGAGGCCTTCCTTTGGCTCTCAAAGTGTTAGGTTCATTTCTTTGTGGAAGAACTATAGAGGAATGGAAGGATGCACTTGCCAAGTTCAAGAAGGTTCCTCCAAAGGACATGCTGAAGATACTTGAAGTGAGTTTTGACGGATTAGATGATAAGGAGAAGACTATATTCTTGGATGTTGCTTGCTTTTTCAATGGGATGGCCAAAGATTATGTCATTCAAATTTTAGAAACATTTGATGAAGACCTTCACCCAAAATTTGGAATAAAGGTTCTTACTGAGAAATCACTGCTAGTAATTAATCACGAAGGGCATTTGTGGGTGCATGATATTCTTCAAGATATGGGTAAATATATTGTTCTTCAAGAATCACCTAATGACGCTAGTAAGCGTTCTAGGACATTGTCTTTGAAGGATGCCAATGATATCCTAAAAAGAAATAAGGGTACAAGAGCAATTCGAGGTATTGCTCTAACATTAGAAAAATCATTTGATGCACTTTGGGATCCTAAAGCCTTCTCAAAGATGAGTAATCTCAAGTTACTTACCATTTCAAGTTCCTCATCACATGTTTCTCGTTGCCAATTGAATCTTCCTGGTGGACTTAAATCTCTTCCCAATGAATTGAGAGTTTTTGAATGGGAGGGGTATCCTTTTGATTATCTGCCCAGACATACTCAACTTGATAAACTTGTTCATCTAAAAATGCAACATAGCAAGTTAAAACAACTTTGGAGAGGCACACAGTCTCTACAAAGGCTGATGTCCATTGATTTATCTCATTCAAAATACCTCATCAAAACTCCAGATTTTGATAGAATTCCTAATCTTGAGATATTGATTCTAGAAGGGTGTTCTAACCTTGTTGAAATTCACCAGTCTCTTGGGCAACACAAGAATCTTGTCACTGTTAATTTGAAAGGCTGCACAAAAGTTAAATCCCTTACAAGAAAATTTGAGATGGATTGCTTACAGACTTTTGTTCTATCCGGTTGTTTAAAAATTAGAAAACTTCCTGAGTTTGGAAAGGATATGAAATGTCTCTCTAAGCTTAATTTAGAGGGCACTGCTATATCCAAACTACCTGAATCACTGGGCAATTTGATTGATCTTGCTGAACTAAATTTGTCAGGTTGCAAAAATCTGGCTTGCCTTTCGAATAATGTTTGCAAAAATAAGATTATCACAATTTCTGGTTCGTCAAAGCTTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGGCTTTGGAAGTGCTTGATGTGGGTCATCAAATTTCTAAAGAGGCACAATCAATTTGTGAATACAATGGTCGAGCACATTCTTCAATGTCATGGAGTAGCTTCTCCCTTCTCAGGAAGGCATTTGGGCTTCAAAGGCCTTCAAGCTTCGATGTATTGGTCTCGTTGATTGCCCAATGCTTAAGTCCTTGCCACAACTTCCGTCAAATCTGTCAGTTATTTGGGCAAATGGTTGTCCATCAATGGAACATTACATATTTTCGCAGAAGCTATGGGAGTTCATTGAATCATTCCAATCTCAGCCTGACTTCTTCGTGCAACCCGTTCGCCAATTAA	2742	0.3727	MALDADGVGWSSSSCGSNKRWKYDVFMSFRGEDTRTSFTDHLHDALIRQGLRTFRDEEGLERGQYINPSLLQAIEESRSAIVVLSPGYASSTWCLDELQKILHSKKELGLQVFPIFYCVDPSDVRKQKGNFAEAFMKHEGRFTQDNMKVQIWREALEEVASISGWDSRNKHETKFIETIAKEIMSKLLDDSPSDLSVLVGIESKLDELESVIASDSKGVRSIGIWGTGGLGKTTLARAFYERKCKDFEVCCFLHNIREVFEKGGLISLQRKLLFSLNKRSVEVDDCYEGMKLIKNMVGDRKILLVLDDVSKISQLEYLAREQGWFGNGSRILITTRDMHLLSSYDVSTQYNIKFLSDDQSLQLFRQNAFKGKNQPNEGYLKLSKNVIKYAGGLPLALKVLGSFLCGRTIEEWKDALAKFKKVPPKDMLKILEVSFDGLDDKEKTIFLDVACFFNGMAKDYVIQILETFDEDLHPKFGIKVLTEKSLLVINHEGHLWVHDILQDMGKYIVLQESPNDASKRSRTLSLKDANDILKRNKGTRAIRGIALTLEKSFDALWDPKAFSKMSNLKLLTISSSSSHVSRCQLNLPGGLKSLPNELRVFEWEGYPFDYLPRHTQLDKLVHLKMQHSKLKQLWRGTQSLQRLMSIDLSHSKYLIKTPDFDRIPNLEILILEGCSNLVEIHQSLGQHKNLVTVNLKGCTKVKSLTRKFEMDCLQTFVLSGCLKIRKLPEFGKDMKCLSKLNLEGTAISKLPESLGNLIDLAELNLSGCKNLACLSNNVCKNKIITISGSSKLSRMPEDLNENGALEVLDVGHQISKEAQSICEYNGRAHSSMSWSSFSLLRKAFGLQRPSSFDVLVSLIAQCLSPCHNFRQICQLFGQMVVHQWNITYFRRSYGSSLNHSNLSLTSSCNPFAN	913

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci8g2129	913	Gene3D	-	354	439	IPR042197	-
	Prci8g2129	913	Pfam	TIR domain	22	200	IPR000157	GO:0007165
	Prci8g2129	913	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	190	448	IPR027417	-
	Prci8g2129	913	Pfam	NB-ARC domain	206	422	IPR002182	GO:0043531
	Prci8g2129	913	Pfam	Leucine Rich Repeat	619	638	IPR011713	-
	Prci8g2129	913	Gene3D	Ribonuclease Inhibitor	525	878	IPR032675	-
	Prci8g2129	913	PRINTS	Disease resistance protein signature	221	236	-	-
	Prci8g2129	913	PRINTS	Disease resistance protein signature	390	404	-	-
	Prci8g2129	913	PRINTS	Disease resistance protein signature	296	310	-	-
	Prci8g2129	913	PRINTS	Disease resistance protein signature	638	654	-	-
	Prci8g2129	913	Gene3D	-	15	186	IPR035897	-
	Prci8g2129	913	SUPERFAMILY	Toll/Interleukin receptor TIR domain	16	165	IPR035897	-
	Prci8g2129	913	SMART	till_3	22	162	IPR000157	GO:0007165
	Prci8g2129	913	SUPERFAMILY	L domain-like	548	820	-	-
	Prci8g2129	913	FunFam	Disease resistance protein (TIR-NBS-LRR class)	19	189	-	-
	Prci8g2129	913	SUPERFAMILY	"Winged helix" DNA-binding domain	427	513	IPR036390	-
	Prci8g2129	913	ProSiteProfiles	TIR domain profile.	21	187	IPR000157	GO:0007165
	Prci8g2129	913	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	23	796	IPR044974	GO:0006952
	Prci8g2129	913	Gene3D	-	187	352	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci8g2129	Prci-Chr8	23974814	23981573	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci8g2129	23	824	WRKY Transcription Factor Family	AT4G12020	29.951	4.11e-97	333

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci8g2129	-		-	pcin:129318967	1388.24