Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2126 ATGGCGCTTGATGCTGATGGAGTTGGGTGGTCTTCAAGCTCTTGTGGATCAAATAAGAGATGGAAATATGATGTGTTCATGAGTTTTCGAGGTGAAGATACTCGCACAAGCTTTACTGATCATTTGCATGATGCTTTAATACGCCAAGGATTAAGAACTTTCAGGGATGAAGAAGGACTTGAAAGGGGACAATATATTAACCCAAGTTTACTTCAAGCAATTGAAGAATCTCGTTCTGCAATTGTTGTGCTCTCCCCAGGATATGCTTCTTCAACATGGTGTTTGGATGAGCTCCAAAAGATCCTTCATTCAAAAAAAGAGTTGGGTCTTCAAGTATTTCCAATCTTTTACTGTGTAGATCCATCTGATGTGAGGAAACAAAAGGGAAATTTTGCAGAAGCATTCATGAAACATGAAGGAAGATTTACGCAAGACAATATGAAGGTGCAAATATGGAGGGAGGCTTTAGAAGAAGTTGCTAGCATATCTGGTTGGGATTCCCGAAATAAGCATGAAACAAAATTCATTGAAACCATTGCTAAAGAAATTATGTCTAAGTTACTTGATGACTCGCCATCTGACCTTAGTGTATTAGTTGGAATTGAATCAAAATTAGATGAGTTGGAGTCAGTCATAGCAAGTGATTCAAAGGGAGTTCGATCTATAGGAATTTGGGGAACAGGAGGCTTAGGAAAAACTACTCTTGCAAGAGCTTTTTACGAGCGAAAATGCAAAGACTTTGAAGTTTGTTGCTTTCTTCATAATATCAGAGAGGTATTTGAAAAAGGTGGTTTAATTTCATTGCAAAGAAAACTTCTTTTTTCTTTGAATAAGAGAAGTGTAGAAGTGGATGATTGTTATGAAGGAATGAAGTTGATAAAAAACATGGTGGGAGATAGAAAAATTCTACTAGTCCTTGATGATGTGAGTAAGATAAGCCAACTTGAATATTTGGCTCGAGAGCAAGGATGGTTTGGCAATGGGAGTAGAATATTAATAACAACAAGAGATATGCATTTGTTATCATCATATGATGTATCTACTCAGTATAACATCAAATTCTTGAGTGACGACCAGTCCCTTCAACTTTTCCGTCAAAATGCTTTTAAAGGAAAAAATCAACCAAATGAAGGTTACTTAAAGCTTTCTAAAAATGTGATAAAGTATGCTGGAGGCCTTCCTTTGGCTCTCAAAGTGTTAGGTTCATTTCTTTGTGGAAGAACTATAGAGGAATGGAAGGATGCACTTGCCAAGTTCAAGAAGGTTCCTCCAAAGGACATGCTGAAGATACTTGAAGTGAGTTTTGACGGATTAGATGATAAGGAGAAGACTATATTCTTGGATGTTGCTTGCTTTTTCAATGGGATGGCCAAAGATTATGTCATTCAAATTTTAGAAACATTTGATGAAGACCTTCACCCAAAATTTGGAATAAAGGTTCTTACTGAGAAATCACTGCTAGTAATTAATCACGAAGGGCATTTGTGGGTGCATGATATTCTTCAAGATATGGGTAAATATATTGTTCTTCAAGAATCACCTAATGACGCTAGTAAGCGTTCTAGGACATTGTCTTTGAAGGATGCCAATGATATCCTAAAAAGAAATAAGGGTACAAGAGCAATTCGAGGTATTGCTCTAACATTAGAAAAATCATTTGATGCACTTTGGGATCCTAAAGCCTTCTCAAAGATGAGTAATCTCAAGTTACTTACCATTTCAAGTTCCTCATCACATGTTTCTCGTTGCCAATTGAATCTTCCTGGTGGACTTAAATCTCTTCCCAATGAATTGAGAGTTTTTGAATGGGAGGGGTATCCTTTTGATTATCTGCCCAGACATACTCAACTTGATAAACTTGTTCATCTAAAAATGCAACATAGCAAGTTAAAACAACTTTGGAGAGGCACACAGTCTCTACAAAGGCTGATGTCCATTGATTTATCTCATTCAAAATACCTCATCAAAACTCCAGATTTTGATAGAATTCCTAATCTTGAGATATTGATTCTAGAAGGGTGTTCTAACCTTGTTGAAATTCACCAGTCTCTTGGGCAACACAAGAATCTTGTCACTGTTAATTTGAAAGGCTGCACAAAAGTTAAATCCCTTACAAGAAAATTTGAGATGGATTGCTTACAGACTTTTGTTCTATCCGGTTGTTTAAAAATTAGAAAACTTCCTGAGTTTGGAAAGGATATGAAATGTCTCTCTAAGCTTAATTTAGAGGGCACTGCTATATCCAAACTACCTGAATCACTGGGCAATTTGATTGATCTTGCTGAACTAAATTTGTCAGGTTGCAAAAATCTGGCTTGCCTTTCGAATAATGTTTGCAAAAATAAGATTATCACAATTTCTGGTTCGTCAAAGCTTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGGCTTTGGAAGTGCTTGATGTGGGTCATCAAATTTCTAAAGAGGCACAATCAATTTGTGAATACAATGGTCGAGCACATTCTTCAATGTCATGGAGTAGCTTCTCCCTTCTCAGGAAGGCATTTGGGCTTCAAAGGCCTTCAAGGTCAATAAATCTTTTCTTGTCCCCTTCTTTATCATGCTTGAGCGAATTAAATTTAGGTTATTGTAATCTCTATGATGGATCACTTCCTGATGACATTAGCCGCTTTACATCATTGGCATCATTAAATTTAAGTGGAAACAATTTCATTGACTTACCATCTGGCCTCATTTCCAATCTTTCGAAGCTTCGATGTATTGGTCTCGTTGATTGCCCAATGCTTAAGTCCTTGCCACAACTTCCGTCAAATCTGTCAGTTATTTGGGCAAATGGTTGTCCATCAATGGAACATTACATATTTTCGCAGAAGCTATGGGAGTTCATTGAATCATTCCAATCTCAGGTTCATAATATCAGTGACGTCTTAATATTTGATCAATCTGATGGATATAAATGTTTCCTTCCTGACTTCTTCGTGCAACCCGTTCGCCAATTAAAGATTCCTGGTAGTGAAGTGCCGTCATGGTTTCATAATCAAGACTACTTTTGTGAGAAAGAATTCAATGATCCAAATGTGTCATTCATAGTAAGCATACCTGATCATTGTCGAAGAAGTGAATGGTGGGGCATAGCCACATGCTTAGTGATAGAAAACGATTTGGCATATGACGAAGAGTGTGATATTGTTTGGTGGACTTTCAAATTTCTTAATGATGAATTTCCAAATACGTATGGTTTCTCTATCATTGTGTTACAGGCAAATTGGAGTCATCAACTCTGTATTATATATATTCGTTGTTCCTCTTTAGTTGTAAACAAACTTCAAATGGTATTTTCTACTGTAAATCCATTTGAAATTGATGAGTCACCGAAGTCTAAAGTAAGGAAGTGTGGGTGGCGTGTGGTGTGTAAAGAAGATGTTGAAACATGGAATGAGGGCTGTAGTAGCATCAATGATTGA 3450 0.369 MALDADGVGWSSSSCGSNKRWKYDVFMSFRGEDTRTSFTDHLHDALIRQGLRTFRDEEGLERGQYINPSLLQAIEESRSAIVVLSPGYASSTWCLDELQKILHSKKELGLQVFPIFYCVDPSDVRKQKGNFAEAFMKHEGRFTQDNMKVQIWREALEEVASISGWDSRNKHETKFIETIAKEIMSKLLDDSPSDLSVLVGIESKLDELESVIASDSKGVRSIGIWGTGGLGKTTLARAFYERKCKDFEVCCFLHNIREVFEKGGLISLQRKLLFSLNKRSVEVDDCYEGMKLIKNMVGDRKILLVLDDVSKISQLEYLAREQGWFGNGSRILITTRDMHLLSSYDVSTQYNIKFLSDDQSLQLFRQNAFKGKNQPNEGYLKLSKNVIKYAGGLPLALKVLGSFLCGRTIEEWKDALAKFKKVPPKDMLKILEVSFDGLDDKEKTIFLDVACFFNGMAKDYVIQILETFDEDLHPKFGIKVLTEKSLLVINHEGHLWVHDILQDMGKYIVLQESPNDASKRSRTLSLKDANDILKRNKGTRAIRGIALTLEKSFDALWDPKAFSKMSNLKLLTISSSSSHVSRCQLNLPGGLKSLPNELRVFEWEGYPFDYLPRHTQLDKLVHLKMQHSKLKQLWRGTQSLQRLMSIDLSHSKYLIKTPDFDRIPNLEILILEGCSNLVEIHQSLGQHKNLVTVNLKGCTKVKSLTRKFEMDCLQTFVLSGCLKIRKLPEFGKDMKCLSKLNLEGTAISKLPESLGNLIDLAELNLSGCKNLACLSNNVCKNKIITISGSSKLSRMPEDLNENGALEVLDVGHQISKEAQSICEYNGRAHSSMSWSSFSLLRKAFGLQRPSRSINLFLSPSLSCLSELNLGYCNLYDGSLPDDISRFTSLASLNLSGNNFIDLPSGLISNLSKLRCIGLVDCPMLKSLPQLPSNLSVIWANGCPSMEHYIFSQKLWEFIESFQSQVHNISDVLIFDQSDGYKCFLPDFFVQPVRQLKIPGSEVPSWFHNQDYFCEKEFNDPNVSFIVSIPDHCRRSEWWGIATCLVIENDLAYDEECDIVWWTFKFLNDEFPNTYGFSIIVLQANWSHQLCIIYIRCSSLVVNKLQMVFSTVNPFEIDESPKSKVRKCGWRVVCKEDVETWNEGCSSIND 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2126 1149 PRINTS Disease resistance protein signature 296 310 - -
Prci8g2126 1149 PRINTS Disease resistance protein signature 638 654 - -
Prci8g2126 1149 PRINTS Disease resistance protein signature 221 236 - -
Prci8g2126 1149 PRINTS Disease resistance protein signature 390 404 - -
Prci8g2126 1149 SUPERFAMILY L domain-like 549 947 - -
Prci8g2126 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 448 IPR027417 -
Prci8g2126 1149 Pfam NB-ARC domain 206 422 IPR002182 GO:0043531
Prci8g2126 1149 Gene3D Ribonuclease Inhibitor 710 970 IPR032675 -
Prci8g2126 1149 Gene3D - 354 439 IPR042197 -
Prci8g2126 1149 Gene3D - 15 186 IPR035897 -
Prci8g2126 1149 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 189 - -
Prci8g2126 1149 Pfam TIR domain 22 200 IPR000157 GO:0007165
Prci8g2126 1149 Pfam Leucine Rich Repeat 619 638 IPR011713 -
Prci8g2126 1149 SMART till_3 22 162 IPR000157 GO:0007165
Prci8g2126 1149 Gene3D Ribonuclease Inhibitor 550 709 IPR032675 -
Prci8g2126 1149 Gene3D - 187 352 IPR027417 -
Prci8g2126 1149 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Prci8g2126 1149 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 165 IPR035897 -
Prci8g2126 1149 SUPERFAMILY "Winged helix" DNA-binding domain 427 513 IPR036390 -
Prci8g2126 1149 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 774 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2126 Prci-Chr8 23971468 23981573 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2126 23 824 WRKY Transcription Factor Family AT4G12020 29.951 3.61e-94 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2126 - - pcin:129318967 1870.13