Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2124 ATGGCACTTGAAGCTCATGGAGTTGACCACCCTTCAAGCTCTTTTGGTTCGGCTAGGAGATGGAATTTCAAGGATGACGAAGAACTTGAGAGGGGACAAGTTATTAAACCAAGTCTGCTCCGAGCAATTGAAGAATCTCTTTCTGCAATTGTTGTTCTCTCTCCAAATTATGCTTATTCAACTTGGTGCCTGGATGAGCTCTCAAAGATTCTCCATTCTAAGAAAGAGTCAGGTCTTTATGTATTTCCAATATTTTCTGGTGTGGATCCATCTAATGTTGAACATCAGAGAGGAAGTTTTGCAGAAGCATTTAAAAAGCATGAAGAAATATTTACAAGAGATGAAATGAAGGTGCAAAATTGGAGGGATGCTTTAAAAGAAGTTGCTAACTTATCTGGCTGGCACTCTGACAATTGTCATGAAACAAAACTCATTGAAACCATTATTGAAAAAGTGTGGTCAAAAATATATGATGAACTTCCATTTGACTTTGAGAAATTGGTTGGAATTGAATCAAAAATTGTCAACTTAAACTCACTTATAGTTAATGGATTGGGTGAAGTTCAATTTATAGGCATATGGGCCATAGGTGGTTTAGGTAACACTACTCTTGCAAGAGCTTTCTATGAGAGAACGTATAAAGATTTTGAAGTTCATTGCTTTCTTCTTAATGTTAGAGAGGTATATGAAGCAGAAGAGAAATGGAAGGATGCGCTTCCTAAGTTGAAGAAGGTTCCTCCAAATAACATTTTGAAGATACTTAAGGTGAGTTTTGATGAATTAGATCATAGGGAAAAGACTATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGCCAAAGGCCCTCTCATACAAATTTTAGAAATTTTGGATGAGGATCTTCACCCAACAATTGGAATAGATGTTCTTATTGACAAATCACTAGTAATCAATTCAGAAGGGTATTTGTGGGTGCACCATATACTTCGAGATATGGGTAAATATATAGTCTCTCAAGCATCATCACCTAATGATGCTGGCAAGCATTCTAGGATATTGTCTTTGAAGGATGCCAATGATGTATTAGAAGGAAATAAGGGGACAGGAGCAATTCGGGCTATAGCCATAATAGTAGAAGAAACATTTAATGCACTTTCGAATCCTGACGCCTTCTCAAGGATGATCAATCTCAAATTACTTGTCATTTCAAGCCGCTCACATATTTCTCATTGTCAATTGAATCTCTCACGTGGAATTAAGTCCCTTCCCAATGGCCTGAAAGTCTTAGCATGGGATGGGTATCCTTTGGATTCTTTGCCCAATCAAACAAAACTGCATGAACTTCTTGTTCTAAAAATGAAACATAGCAAGTTAAAAGAACTTTGGAGGGGAGCACGGTCTCCGCCAACGTTGAAGTCCATTGATTTATCTTATTCAAAATTCCTCATCAAAACTCCAGATTTTTATAAAATTCCTAATCTTGAGATAGTGATTCTAGAAGGGTGTTCTACATTGGTTGAAGTTCACCAGTCTCTTGGGCAATATAATAATCTTGTTATTGTTAATTTGAAAGGCTGCAAAAAAGTTAGAACCCTTCCAAGAAAATTTGAGATGGATTGCTTAAAGATTTTTTTTCTATCTGGTTGTTCAAAAATTAGAAAACTTCCTGAGTTTGAAAAGGATATGAAATGTCTCTCTACACTAGATTTAGAGAACACTGCTATATCCAAACTACCTGAATCATTGGGCAATTTGATTGGTCTTGTTGAATTAAATTTGACGGGTTGCACAAATCTTGTTTTCCCTCCAAATAATGTTCATAAATTCATAGCCAGGAAGATTTTCAAAATTTCTGGTTGGTCTAACCTTTCAAGGATGCCAGAGGATTTGAATGAAAATGGGACTTTGGAAGTGCCTGATGTGGGTCGAATTTCACCATCATCATGGAGTTGTGTGTCCCTGCTCAGGAAGTCATTTGGGCTTCAAAGGCCTTTAAGCTCAACAAATTTTATGGTACCCATTTCTTTATCATTCTTGAGCCAATTAAAATTAGGTTATTGCAAACTTCATGATGGATCACTTCTCTTTGCAAAACCTCCACTTCCTTCTCTGTTTGACGCGCTCGACAACTCGGAGGAGGCTAGGATTTGCCTCTTCTTCTTCGTGTCTGCATCTGAGAGTAGCCGAGATGCTGCGTCATCATTAGTGGCTTTACTCGCTGCTGCACCTTTGTTCGCAGCTGTGTCGGCCATTCTTGCTCTGTCTCTTTCTCTCTTCAAATCTGGCATGGTGTTTGTGGGTGATTAG 2289 0.3792 MALEAHGVDHPSSSFGSARRWNFKDDEELERGQVIKPSLLRAIEESLSAIVVLSPNYAYSTWCLDELSKILHSKKESGLYVFPIFSGVDPSNVEHQRGSFAEAFKKHEEIFTRDEMKVQNWRDALKEVANLSGWHSDNCHETKLIETIIEKVWSKIYDELPFDFEKLVGIESKIVNLNSLIVNGLGEVQFIGIWAIGGLGNTTLARAFYERTYKDFEVHCFLLNVREVYEAEEKWKDALPKLKKVPPNNILKILKVSFDELDHREKTIFLDIACFFNGMAKGPLIQILEILDEDLHPTIGIDVLIDKSLVINSEGYLWVHHILRDMGKYIVSQASSPNDAGKHSRILSLKDANDVLEGNKGTGAIRAIAIIVEETFNALSNPDAFSRMINLKLLVISSRSHISHCQLNLSRGIKSLPNGLKVLAWDGYPLDSLPNQTKLHELLVLKMKHSKLKELWRGARSPPTLKSIDLSYSKFLIKTPDFYKIPNLEIVILEGCSTLVEVHQSLGQYNNLVIVNLKGCKKVRTLPRKFEMDCLKIFFLSGCSKIRKLPEFEKDMKCLSTLDLENTAISKLPESLGNLIGLVELNLTGCTNLVFPPNNVHKFIARKIFKISGWSNLSRMPEDLNENGTLEVPDVGRISPSSWSCVSLLRKSFGLQRPLSSTNFMVPISLSFLSQLKLGYCKLHDGSLLFAKPPLPSLFDALDNSEEARICLFFFVSASESSRDAASSLVALLAAAPLFAAVSAILALSLSLFKSGMVFVGD 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2124 762 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 233 615 IPR044974 GO:0006952
Prci8g2124 762 SMART till_3 6 131 IPR000157 GO:0007165
Prci8g2124 762 Pfam TIR domain 23 161 IPR000157 GO:0007165
Prci8g2124 762 Gene3D - 157 271 IPR027417 -
Prci8g2124 762 SUPERFAMILY "Winged helix" DNA-binding domain 249 356 IPR036390 -
Prci8g2124 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 272 IPR027417 -
Prci8g2124 762 Gene3D Ribonuclease Inhibitor 369 651 IPR032675 -
Prci8g2124 762 SUPERFAMILY L domain-like 379 693 - -
Prci8g2124 762 SUPERFAMILY Toll/Interleukin receptor TIR domain 22 134 IPR035897 -
Prci8g2124 762 PRINTS Disease resistance protein signature 190 205 - -
Prci8g2124 762 PRINTS Disease resistance protein signature 460 476 - -
Prci8g2124 762 ProSiteProfiles TIR domain profile. 1 160 IPR000157 GO:0007165
Prci8g2124 762 Gene3D - 4 156 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2124 Prci-Chr8 23942233 23946594 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2124 232 649 WRKY Transcription Factor Family AT4G12020 32.102 9.51e-47 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2124 - - pcin:129317488 1469.14