Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2123 ATGGTTTGGCAAGGGAGCTTAATAATAATAACAACCAGAGACAAGCATTTGTTATTATCACATGGTGTATCTACTTGGTATGACATCAAATTCTTGAGTGATGATGAATCCCTTGAGCTTTTCCACCAAAATGCTTTTAAAGGAAGTAAGCCAAGTGTAGATTTTTTGGAGCTTTCTAGAACTGTGATTCACTATGCTAGTGGCCTTCCTTTGGCGCTCAAAGTGTTGGGTTCATTTCTTTGCGGAAGAAATATATTAGAATGGAGAGATGCAATCGCTAGATTTAAGAAAGTTCCTCCTAATAATGGCATCTTGAAGATACTTAAAATTAGTTTCGATGGATTAGAAGAGGATGAGAAGACTATATTTTTAGATATTGCTTGCTTCTTTAAAGGGATGAAAAAAGATTATGTCATGCAAATCTTACAAAAATTGGATCTACATCCAATAATTGGAATAAAAGTTTTGGTTGATAAATCTTTGGTGATTATTAGTTCTGATACTGTATGGGTTCATGACATGCTTGAGGAAATGGCTAAGAATATTGTTGTTCAACAATCATCCCATGATGCTGGCAAACGTAGTAGGATATGGTCCTTGGAGGATGCTAATCATGTTCTAGAAAGCAATATGGGGACAGAAGCAATTCGAGGCATCGTGTTAAGATTAGACAAACCATATGTCTCCAATTGGGATCCTAAAGCCTTCATAAAGATGAGTAATCTTAAATTACTTATCATAAAAAGTGGTTGGCAATGGCATGCTGATTGTTTTTGTTATTTGAATCTTCCTTGTGGGCTTAAATTCTTTCCAAGTACATTAAAAGTGTTAGAATGGAAGGGATGCTGTTTAGATACTTTGCCAAGTCCGGTTCGAAAACAACCACAGGTTTTAGGAAAGCTTAAGCACCTTGATTTAAGCCATTCAAGATATCTAATCAAAACACCAAATTTTGATGAAGTCCCTGATCTTGAAATACTCATTCTTGAAGGTTGTGTAAACGTTGTTGAAGTACATTCATCTCTTGGATGCCATAAGAATCTGGCCACAGTCAATTTGAAGGGTTGTAGGAGTATTAAAACTCTACCAAGAAAGTTTGAGATGAAACGCCTAGAGACTCTTACACTCTCAGGCTGTCCAAAAATCAAACGACTTCCTGAATTTGGCGAAAGTATGGAGCGTCTATCCCAACTTGATGTGGAGGATACTGGTATCACAAAACTACCTCAATCACTTGTCAATTTGACCACTCTTGCTGTTTTAAATCTTAGGAATTGCAAAAGTCTGGTATGCCTTCCCAATGTCATTCAATATATGAAGTCTATTAGAATTCTTAATTTTTCTGGTTGCTCAAAACTTTCAAGTCTTCCAGAGGTTTCGAATGAAAATGAGGCTTTAGAAGAGCTTGATGCTAGTGGAACTGCTATAAAGGAAGTGGCTTCATCAATTTGTCAGTTGAAAAATTTGAAATCACTATCTTTTAGTAGATGTACTGGACAAGCACAATCATCCTCACAAAATTTCTCTTCCATTTTCAGTAGGTTCTCTAGGATTACAAGGCCTTCAATATCCATTGGGTTATTGCTGCCCCCTTCTTTATCAAATTTATCATCATTAAGATTCTTACATTTAAGTCACTGCAATATCTATGATGAGTCCCTTCCTAATGATTTTAATGCATTATCATCATTGCGGGGGCTTGATCTGCGTGGAAACAATTTTGTTAACCTACCTAGTGGCTTTACCTCTAACCTTTTAAAGCTCCAATGGGTTAGGTTTAGTCATTGTCCAAGGCTTCAATCATTACCACGACTTCCGCCAAATATATGGTCTGCAGATGCAGTTGATTGTCCTTCAATGACACCTAAACTTGGTCCAGAACAGCTGTTGGAATGGCTCGAACAATTTGAATATGAGGATGGCTTTAAGTCAGAATGGTGGTTCTTTGTATTAAATATTCCAGGAAGTGAAGTGCCATCATGGTTTTTTAATCAAATTACTTCTATGATGAGGCTTGGTGTTGTAAACCAAATGTGTCAATTATCGCGGATATAG 2055 0.3669 MVWQGSLIIITTRDKHLLLSHGVSTWYDIKFLSDDESLELFHQNAFKGSKPSVDFLELSRTVIHYASGLPLALKVLGSFLCGRNILEWRDAIARFKKVPPNNGILKILKISFDGLEEDEKTIFLDIACFFKGMKKDYVMQILQKLDLHPIIGIKVLVDKSLVIISSDTVWVHDMLEEMAKNIVVQQSSHDAGKRSRIWSLEDANHVLESNMGTEAIRGIVLRLDKPYVSNWDPKAFIKMSNLKLLIIKSGWQWHADCFCYLNLPCGLKFFPSTLKVLEWKGCCLDTLPSPVRKQPQVLGKLKHLDLSHSRYLIKTPNFDEVPDLEILILEGCVNVVEVHSSLGCHKNLATVNLKGCRSIKTLPRKFEMKRLETLTLSGCPKIKRLPEFGESMERLSQLDVEDTGITKLPQSLVNLTTLAVLNLRNCKSLVCLPNVIQYMKSIRILNFSGCSKLSSLPEVSNENEALEELDASGTAIKEVASSICQLKNLKSLSFSRCTGQAQSSSQNFSSIFSRFSRITRPSISIGLLLPPSLSNLSSLRFLHLSHCNIYDESLPNDFNALSSLRGLDLRGNNFVNLPSGFTSNLLKLQWVRFSHCPRLQSLPRLPPNIWSADAVDCPSMTPKLGPEQLLEWLEQFEYEDGFKSEWWFFVLNIPGSEVPSWFFNQITSMMRLGVVNQMCQLSRI 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2123 684 Gene3D Ribonuclease Inhibitor 391 621 IPR032675 -
Prci8g2123 684 Gene3D Ribonuclease Inhibitor 219 390 IPR032675 -
Prci8g2123 684 Pfam NB-ARC domain 4 97 IPR002182 GO:0043531
Prci8g2123 684 Gene3D - 31 116 IPR042197 -
Prci8g2123 684 PRINTS Disease resistance protein signature 66 80 - -
Prci8g2123 684 PRINTS Disease resistance protein signature 413 429 - -
Prci8g2123 684 SUPERFAMILY L domain-like 220 633 - -
Prci8g2123 684 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 360 506 IPR044974 GO:0006952
Prci8g2123 684 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 126 IPR027417 -
Prci8g2123 684 SUPERFAMILY "Winged helix" DNA-binding domain 104 208 IPR036390 -
Prci8g2123 684 SMART LRR_typ_2 536 560 IPR003591 -
Prci8g2123 684 SMART LRR_typ_2 392 415 IPR003591 -
Prci8g2123 684 SMART LRR_typ_2 561 583 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2123 Prci-Chr8 23927394 23931915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2123 5 494 WRKY Transcription Factor Family AT4G12020 32.239 4.55e-58 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2123 - - pcin:129299341 911.753