Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2121 ATGCCTCAAGAGTGGATGAGTCTTGCGACTCTGAATCCTTGCAATGGACTTGATGTTAATGGAGTTGTATGTTCTTCAAGCTCTTATGGATCAACTAAGAGACGGAAATATGATGTGTTTTTGAGTTCTCGAGGTGAAGATACTCGCACAAGCTTTACTGATCATTTATATGATGCTTTAAGGCGCAAAGGAATAAGAACTTTTAGGGATGAAGAAGGACTTGAAAGGGGACAATATATCAACCCAAGTTTACTACAAGCCATTGAAGAATCTTGTTCTGCAATTGCTGTGCTCTCCCCAGGATATGCTTCTTCAACATGGTGCTTGGATGAACTCCAAAAGATTCTTCATTCAAAAAAAGAGTTGGATCTTCAAGTATTTCCAATCTTTTATGGTGTAGATCCGTCTGATGTTAGGAAACAAAAGGGAAGTTTTGAAGAAGCATTCATGAAGCATGAAGAAAGATTTACACAAGACAAAATGAAGGTGCAAAGATGGAGGCGTGTTTTAGAAGAAGTTGCTAGCTTATCTGGTTGGGACTCACGGAATAGGCATGAAACAGAATTCATTGAAAGCATTGCAAAAGAAATGAAGTATAAGTTACATGATGAATCGCCATTTGATCTTGGTGCATTAGTTGGAATTGAATCAAAATTAGATGAGTTGGAGTCACTCATAGCAATTGATTCGGAAGGAGTTCGATCTATAGGAATATGGGGAACAGGAGGCTTAGGCAAAACTACTCTTGCTAGAGCTTTTTATGACTGGAAGTGCAAGGATTTTGAGGGGGCAGGAGCAATTCGAGGTATAGCTCCATCACTAGAAAAATCATCAGATGCACTTTGGGATCCTGAAGCCTTCTCAAAAATGAGTAATCTCAAGTTACTTATCATTTCAAGTTGCTCATCACATGTTTCTCATTGCCAATTGAATCTTCCTCATGGACTTAAATCTCTTCCCAATGAATTGAGAGTTTCTGAATGGGAGGGGTATCCTTTAGATTCTTTGCCCAGACATACTCAACTTGATAAACTTGTTCATCTAAAAATGCAACATAGCAAGTTAAAACAACTTTGGAAAGGAACACAGTCTCTAAAAAGGCTGATGTCCATTGATTTATCTCATTCCAAATACCTCACTAAAACCCCAGATTTTGATGGAATTGATAATCTTGAAACATTGATTCTCGAAGGGTGTTCTAACCTTGTTGAAATTCACCAGTCCCTTGGGCAACACAAGAATCTTGTCATTGTTAATTTGAAAGGCTGCATAAAAGTTAAAATCCTTCCAAGAAAATTTGAGATGGATCGCTTACAAACTTTTGTTCTATCTGTTTGTTCAAAAATTAGAAAACTTCCTGAGTTTGGAAAGGATATGAAATGTCTCTCTAAGCTTGATTTAGAGGACACTGCTATATCCAAATACCTGAATCACTGGGCAATTTGA 1446 0.3762 MPQEWMSLATLNPCNGLDVNGVVCSSSSYGSTKRRKYDVFLSSRGEDTRTSFTDHLYDALRRKGIRTFRDEEGLERGQYINPSLLQAIEESCSAIAVLSPGYASSTWCLDELQKILHSKKELDLQVFPIFYGVDPSDVRKQKGSFEEAFMKHEERFTQDKMKVQRWRRVLEEVASLSGWDSRNRHETEFIESIAKEMKYKLHDESPFDLGALVGIESKLDELESLIAIDSEGVRSIGIWGTGGLGKTTLARAFYDWKCKDFEGAGAIRGIAPSLEKSSDALWDPEAFSKMSNLKLLIISSCSSHVSHCQLNLPHGLKSLPNELRVSEWEGYPLDSLPRHTQLDKLVHLKMQHSKLKQLWKGTQSLKRLMSIDLSHSKYLTKTPDFDGIDNLETLILEGCSNLVEIHQSLGQHKNLVIVNLKGCIKVKILPRKFEMDRLQTFVLSVCSKIRKLPEFGKDMKCLSKLDLEDTAISKYLNHWAI 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2121 481 SMART till_3 36 176 IPR000157 GO:0007165
Prci8g2121 481 FunFam Disease resistance protein (TIR-NBS-LRR class) 33 203 - -
Prci8g2121 481 Gene3D - 29 200 IPR035897 -
Prci8g2121 481 PRINTS Disease resistance protein signature 457 473 - -
Prci8g2121 481 PRINTS Disease resistance protein signature 235 250 - -
Prci8g2121 481 Pfam Leucine Rich Repeat 344 363 IPR011713 -
Prci8g2121 481 Gene3D - 201 268 IPR027417 -
Prci8g2121 481 Gene3D Ribonuclease Inhibitor 273 480 IPR032675 -
Prci8g2121 481 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 179 IPR035897 -
Prci8g2121 481 Pfam TIR domain 36 205 IPR000157 GO:0007165
Prci8g2121 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 263 IPR027417 -
Prci8g2121 481 SUPERFAMILY L domain-like 282 474 - -
Prci8g2121 481 ProSiteProfiles TIR domain profile. 35 201 IPR000157 GO:0007165
Prci8g2121 481 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 37 263 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2121 Prci-Chr8 23881228 23886991 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2121 263 460 WRKY Transcription Factor Family AT4G12020 39.130 1.02e-29 121