Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2101 ATGGGGAAATCAGCGTTTCATGAATCTCTCAAAGCTCTGGAAGCTGATATTCAGTACGCCAATGATCTGTTATTAGGGTATCCCAGGGATAAAGATGGAGCATGCTTTCAGATGAGACTGTCATACAGTCCAGGCGCTACCTTATTTCTTTTTCTTGTTCGATGGACTGATTACCACCTGGCTGGTGCTCTGGGTTTGTTGAGAGTTCTAATTTATATGACGTATGGAGATGGGAAGACCACCATGTCAATATACGAAAGGAAAGCAAGCATTAAAGAGTTTAACTCCATTATATTTCCTGCTTTATTGCAACTTGAGAAAGGCATCACAGATTTGGAGGAAAAGAAACAGAATGAAGTATATGCGGTCAGATATAAAAAGAAAGAAAAGCAATCGATGCTTGACATGGAAAGAGAGGAGGAATGTGGCATTTGCATGGAGGTGAAGGGAAAAGTTGTGCTGCCTAATTGCTGCCATTGTATGTGTTTGAAGTGCTTCAGGGATTGGTGTGAGAGATCCGAATCTTGTCCCTTTTGCAGGGGAAATCTTAAAAGAGTCAACTCAGGTGACCTTTGGAATTACATAGATGATGGTGATATTGTGGATATCAGGACGATTTTCAAAGAAAACCTTAAGATACTGCTTTTGTACATAGAAAAGTTGCCTATTGTGGATCCGGATCCCATGCGTATGTCCTATGAACCTTGTGGAAGTTAG 717 0.4086 MGKSAFHESLKALEADIQYANDLLLGYPRDKDGACFQMRLSYSPGATLFLFLVRWTDYHLAGALGLLRVLIYMTYGDGKTTMSIYERKASIKEFNSIIFPALLQLEKGITDLEEKKQNEVYAVRYKKKEKQSMLDMEREEECGICMEVKGKVVLPNCCHCMCLKCFRDWCERSESCPFCRGNLKRVNSGDLWNYIDDGDIVDIRTIFKENLKILLLYIEKLPIVDPDPMRMSYEPCGS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2101 238 FunFam RING/U-box superfamily protein 123 189 - -
Prci8g2101 238 PANTHER RING FINGER PROTEIN 41, 151 4 227 - -
Prci8g2101 238 SUPERFAMILY RING/U-box 134 185 - -
Prci8g2101 238 ProSiteProfiles Zinc finger RING-type profile. 142 180 IPR001841 -
Prci8g2101 238 Pfam Ring finger domain 141 180 IPR001841 -
Prci8g2101 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 190 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2101 Prci-Chr8 23418636 23421469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2101 104 184 C3H Transcription Factor Family AT5G01960 28.395 3.38e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2101 - K25840 gmx:100808567 382.104