Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2083 ATGGAGAAAGCCGCTCATAGTGATGAAGCTGATGAGATGCCATCTTTGCACCTGCCAATTTCCGGTGCCCCATATGATGCTGAGCCCAAACAGACAGTCCCCATTAAGTATTCTGTTGTCAGTAGGCATGGGTTTGGGACTGTGGGGAAACACGTGTCATTGCTTGCCAATCATTTCCAAGTTTCTATTGGTGTTCCAGATGCAGTATTTTTCCAGTATAGTGTTTCTATTACTTCAGAACATGATAGAGCTGTCGAAAGCAAGGGCATTGGGAGAAAACTGATTGATAGGCTTTACCAAAACTACTCTTCTGAACTTGGTGGCAAAAGGTTTGCCTACGATGGAGAGAGAACTTTGTATACAGTGGGTCCTCTGCCACGTCAAAAGTTTGAGTTCAAAGTTGTACTTGAGGAATCATTAGCAAAATGCAGTAGTTCTGGGAGTCCTGGTGGTGATGGCAGCCTTAGTGTTGGAAATAAAAGGTCAAAGCATTCTTTTAAGTTAAAGACTTTCAAGGTAGAGATAAGTTTTGCTTCCAAAGTACCCCTGCGGTCCATTGCTTTTGCCTTAGGCGGAGTTGAGTCAGATCCTAACACTCAGGATGCTTTGAGAGTGCTTGATATCATTCTGAGGCAACAAGCAGCTAGCATGGGTTGTCTTTTGGTAAGGCAATCGTTCTTTCATGATGACTCGAGGAATTACATTGATGTTGGAGGTGGGGTAACAGGAGTTCGAGGTTTTCATTCCAGCTTTCATCCTACTCAGGGCGGATTATCTCTCAATATGGATGTGGCAACAACAATGATCTTAACCCCTGGACCTGTAATTAATTTTCTCCTATCCAACCAGAATGTGAAGGAACCTCGTTATATTGACTGGGCAAAGGCTAAGAAAATGCTTAAAAATTTAAGGGTACGTGCATCTCATCGCAACCAAGAATATAAAATTATTGGCTTGAGTGAAAAACCATGTAATCAGCAACTTTTTAGTATGAAGGTGAAAAATGGTGACGTCAGTAATGGGGTGGAGACAGTGGATATTACTGTATATGAGTATTTTGCTAAACACTGTAGCATAGAACTGACTTCCGCATATCTTCCTTGCCTTGATGTGGGGAAGCCGAAATGGCCGGTCTATCTGCCCATGGAGCTTTGCTCGCTCATTCCCCTTCAACGTTATACAAAGGCATTATCTCCAATCCAAAGAGCTTCTTTAGTTGAAAAATCACGACATAAGCCTCAAGATAGAATCAAAACGATAACAAATGCTATGACACATCATCACTATGATGATGATCCTGTTCTTGTGGCATGTGGCATTTCTATCAAGAAGGAATTTACACAAGTTGAAGGTCGAGTTCTTGAGACTCCAAAATTGAAGGTTGGTAAGAATGATGAGTGCTTCCCTCGTAATGGCCGATGGAACTTTAATAACAAGACACTTCTACAACCAACTCACATTAATCTCTGGGCTGTTGTCAACTTTTCAGCTCGTTGTGATACTAGTTACATTTCAAGGGAGCTTATCAAATGTGGAATGAACAAAGGAATTCAAATTGAACGCCCATATACTTTGATAGAAGAAGATTCACAAATTAGAAGATCTAGCCCTGTTGCTAGGGTTGAAAAGATGTTTGAGCTGCTATATGCTAAGCTTCCTGAAGAACCAAACTTAATTCTTTGTGTCTTGCCAGAACGGAAAAATTGTGACATTTATGGACCTTGGAAGAAGAAATGTCTGACTGAAGTTGGTGTTGTCACACAGTGCATTTCTCCTTTGAAGATCAGTGATCAATACCTCACTAATGTACTTCTTAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGTTGGCCATAGAGCATTCAGGGCATATTCCCCTGATAAATGATACTCCAACACTGATTTTAGGAATGGATGTCTCTCATGGTTCCCCTGGTCAATCAGATAGTCCATCAATAGCAGCAGTTGTTGGATCTAGATGTTGGCCCCTAATTTCAAGGTATAGAGCATCTGTGCGAACCCAATCATCTAAGGCAGAGATGATTAATACTCTATACAAACCTTTGGAAGAAGGGAAAGATGATGGCATGATCAGAGAACTACTTTTGGATTTCTATCATTCAAGTAATGGACGGAAACCAACTCAAATTATTGTCTTCAGGGATGGAGTTAGTCAGTCACAATTTAATCAGGTTTTGAACATTGAGCTGGACCAGATAATTAAGGCCTATCAACACCTTGGAGACGTTGATATTCCCAAGTTCACTGTAATTGTGGCACAAAAGAATCATCACACAAAGTTGTTTCAAGACAATGGTTCAGAAAATGTCCCTCCTGGGACTGTCGTTGACACAGAAATCGTGCATCCACAGAATTATGATTTCTATATGTGTTCACATGCAGGGATGCTTGGAACTCCTAGGCCAGCACATTACCATGTGTTACTTGATGAGATTGGTTTCTCAGCAGACGGCATACAGAATTTAGTCCATTCGCTGTCTTATGTGTACCAGAGGAGTACAGCTGCAGTCTCAGTCGTGGCTCCCATATGCTATGCCCACCTTGCCGCTGCTCAGATGAGAAAATTTTTGAAGTTTGATGATTCATCAGAGACATCCTCAAGTTTCACAACTGAACTAGATGCTGCAACCGAGCTGCCGCGGTTGCATCGGAATGTTCAGAGTAGCATGTTCTTCTGTTGA 2706 0.4139 MEKAAHSDEADEMPSLHLPISGAPYDAEPKQTVPIKYSVVSRHGFGTVGKHVSLLANHFQVSIGVPDAVFFQYSVSITSEHDRAVESKGIGRKLIDRLYQNYSSELGGKRFAYDGERTLYTVGPLPRQKFEFKVVLEESLAKCSSSGSPGGDGSLSVGNKRSKHSFKLKTFKVEISFASKVPLRSIAFALGGVESDPNTQDALRVLDIILRQQAASMGCLLVRQSFFHDDSRNYIDVGGGVTGVRGFHSSFHPTQGGLSLNMDVATTMILTPGPVINFLLSNQNVKEPRYIDWAKAKKMLKNLRVRASHRNQEYKIIGLSEKPCNQQLFSMKVKNGDVSNGVETVDITVYEYFAKHCSIELTSAYLPCLDVGKPKWPVYLPMELCSLIPLQRYTKALSPIQRASLVEKSRHKPQDRIKTITNAMTHHHYDDDPVLVACGISIKKEFTQVEGRVLETPKLKVGKNDECFPRNGRWNFNNKTLLQPTHINLWAVVNFSARCDTSYISRELIKCGMNKGIQIERPYTLIEEDSQIRRSSPVARVEKMFELLYAKLPEEPNLILCVLPERKNCDIYGPWKKKCLTEVGVVTQCISPLKISDQYLTNVLLKINSKLGGINSLLAIEHSGHIPLINDTPTLILGMDVSHGSPGQSDSPSIAAVVGSRCWPLISRYRASVRTQSSKAEMINTLYKPLEEGKDDGMIRELLLDFYHSSNGRKPTQIIVFRDGVSQSQFNQVLNIELDQIIKAYQHLGDVDIPKFTVIVAQKNHHTKLFQDNGSENVPPGTVVDTEIVHPQNYDFYMCSHAGMLGTPRPAHYHVLLDEIGFSADGIQNLVHSLSYVYQRSTAAVSVVAPICYAHLAAAQMRKFLKFDDSSETSSSFTTELDAAIXELPRLHRNVQSSMFFC 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2083 902 SUPERFAMILY PAZ domain 267 428 IPR036085 GO:0005515
Prci8g2083 902 FunFam Protein argonaute 3 626 902 - -
Prci8g2083 902 CDD PAZ_argonaute_like 272 388 - -
Prci8g2083 902 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 34 868 - -
Prci8g2083 902 ProSiteProfiles Piwi domain profile. 558 866 IPR003165 GO:0003676
Prci8g2083 902 CDD Piwi_ago-like 433 865 IPR045246 -
Prci8g2083 902 Pfam Argonaute linker 1 domain 222 269 IPR014811 -
Prci8g2083 902 SMART Piwi_a_2 558 866 IPR003165 GO:0003676
Prci8g2083 902 SMART DUF1785_2 220 272 IPR014811 -
Prci8g2083 902 Gene3D - 453 619 - -
Prci8g2083 902 FunFam Protein argonaute 7 267 393 - -
Prci8g2083 902 Pfam N-terminal domain of argonaute 51 210 IPR032474 -
Prci8g2083 902 Gene3D - 625 902 IPR036397 GO:0003676
Prci8g2083 902 Pfam Argonaute linker 2 domain 415 460 IPR032472 -
Prci8g2083 902 ProSiteProfiles PAZ domain profile. 297 389 IPR003100 GO:0005515
Prci8g2083 902 Gene3D paz domain 266 393 - -
Prci8g2083 902 SMART PAZ_2_a_3 267 411 IPR003100 GO:0005515
Prci8g2083 902 Pfam PAZ domain 277 405 IPR003100 GO:0005515
Prci8g2083 902 Pfam Piwi domain 558 866 IPR003165 GO:0003676
Prci8g2083 902 MobiDBLite consensus disorder prediction 1 25 - -
Prci8g2083 902 SUPERFAMILY Ribonuclease H-like 546 863 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2083 Prci-Chr8 22830855 22839916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2083 42 902 Eukaryotic Initiation Factors Gene Family AT5G43810 38.606 1.39e-176 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2083 K11593 - qsu:111993396 1338.17