Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2074 ATGGGTCTACTTTCAGTGATGGGTTCTGTTGCCAAGGCTGAACTAATGTTTTCAGGTGAGCTTGATGAAAGCATGGCTGAACTTGAAGAGAGTAGGAGAAAATTAGTCAATCTGAAAATGCAGAAGGATGCATCAATAGGGATGCAATCACCTGGTTCGGATGCAGTTAATGGAACTTTATCTCCTAAAAAGCCTTCAGACAAGACAATGGGTCTGCGCGAGTTGAAAGATTCAATTGAGGAAGCAAAGATAGTGGCAGCTGACCGTCTTTCAGAGCTTCAAGAAGCACAGGAAGACAATCTGACCTTGAGAGGGCATTTGCAAGATCTTCAGAATGAATTGACTGATGACAAGTATGTACGCTCATCCCGTCTATATTCTTTGGTAAATGATCAACTTCAACATTGGAATACTGAATTGGAGCGGTATAAAGCATTGACAGAGTCTCTGCAGGCTGAAAGGGTCCATATCATGAAATGGGAGAAGGAACTGAACTCAAAATTGGAGTCTGCAGATACTGCAAGGCTTACGGTTGACAATTCTGACAGTAGGATTGAAGAGCTAGAGCTTCAGTTGCAAAAGTGTACTATTGAAAAGAATGATATTGAAATAGAGATGGAAGAAGCTATACAGGATACTGGGAGAAAAGATATTAATTCTGAGTTTCATGTCATGGCTTCGGCCTTATCTAAGGAAATGGGTATGATGGAAGCTCAACTGAAACGATGGAAGGATGCAGCTCATGAGGCAGTTTCCTTACGTGAGAAAGCACATTCACTAAGATCTTTGTTAAGTGGGAAGACAAGTGAAATAAAAAGCTTAGCAAACAAATGTTCCGAGCAGGCTGTGGAGATAAAGTCTTTAAAAACATTGATTGAAAAGCTGCAGAAGGAAAAAGTGGAATTACAATTCTTTCTGGACTTGCATGGACAGGAGAATCATGAAAAGAGTGGTTTGGTAGAAATTAGAGAATCAGAAAGTAAAGCTCTCGCTCAAGCTGAAGTACTGAAGAATGCTTTAGATGAGCATAGTTTAGAGTTGAGGGTGAAAGCTGCCAATGAAACTGAAGCTGCTTATGAGCAAAGGCTTTCTGCGGCAGAAGCTGAAATAGAGGATTTAAGGGCCACACTGGAGGCTTCTGAAAGAGATATTTTGGAGCTGACTGAGGCTATTAAAGTGAAAGATTCTGAGTCAGAGGCTTATATATCTGAAATTGAGACTATTGGACAAGCATATGAAGATATGCAGACGCAGAACAAACATCTGTTGCAGCAGGTGACTGAGAGGGATGACTATAATATTAAGCTAGTATCAGAGAGCGTAAAGACAAAGCAGGCACATAGCATTTTACTTTCTGAGAAGCAGGCCTTAGCAAAGCAGCTTCAACAAATTAACGCTTCAATAGGAACTTTAAAGATGGGGATTACACACAGTGAAGACCAGATGAAAGCTCTTATATTGGAAGCCATTAAATCTACTCAAGAGGAAAAGCACCTTGCAGTAACCCTGGAATCTGCAAAGTGGGAATTGGCTGATGCTGAAAAGGAGTTGAAGTGGCTTAAGTCTGCTGTTACTTCTTCCGAGAAGGAGTACGATCAAATTCAAAAAGACTTGGAAGCTATCCAAATTGAGCTAGATACTGAAAGGAGTTCAAGAAAGAAGGTTGAGGAAGAACTCAAGGAATTAAATAGCAAAATTGATGAGCTGAGTTCTGAAACCGGAGAGACGGCAATACAAAAACTTCAAGATGAAATTAGGGTTTGCAAGAACATGATCAAGTGCACCGTCTGTTCTGATCGTCCAAAAGAGGTTGTGATTGTGAAGTGTTATCATCTGTTCTGCAATCCATGCATTCAAAGGAACTTAGAACTCCGTCACCGCAAGTGTCCTGCCTGTGGAACTGCATTCGGTCAGAGTGATGTTCGGTTTGTGAAAATATGA 1941 0.4086 MGLLSVMGSVAKAELMFSGELDESMAELEESRRKLVNLKMQKDASIGMQSPGSDAVNGTLSPKKPSDKTMGLRELKDSIEEAKIVAADRLSELQEAQEDNLTLRGHLQDLQNELTDDKYVRSSRLYSLVNDQLQHWNTELERYKALTESLQAERVHIMKWEKELNSKLESADTARLTVDNSDSRIEELELQLQKCTIEKNDIEIEMEEAIQDTGRKDINSEFHVMASALSKEMGMMEAQLKRWKDAAHEAVSLREKAHSLRSLLSGKTSEIKSLANKCSEQAVEIKSLKTLIEKLQKEKVELQFFLDLHGQENHEKSGLVEIRESESKALAQAEVLKNALDEHSLELRVKAANETEAAYEQRLSAAEAEIEDLRATLEASERDILELTEAIKVKDSESEAYISEIETIGQAYEDMQTQNKHLLQQVTERDDYNIKLVSESVKTKQAHSILLSEKQALAKQLQQINASIGTLKMGITHSEDQMKALILEAIKSTQEEKHLAVTLESAKWELADAEKELKWLKSAVTSSEKEYDQIQKDLEAIQIELDTERSSRKKVEEELKELNSKIDELSSETGETAIQKLQDEIRVCKNMIKCTVCSDRPKEVVIVKCYHLFCNPCIQRNLELRHRKCPACGTAFGQSDVRFVKI 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2074 646 Coils Coil 503 572 - -
Prci8g2074 646 Coils Coil 278 298 - -
Prci8g2074 646 Coils Coil 133 153 - -
Prci8g2074 646 MobiDBLite consensus disorder prediction 46 70 - -
Prci8g2074 646 Coils Coil 349 390 - -
Prci8g2074 646 SUPERFAMILY RING/U-box 593 637 - -
Prci8g2074 646 Coils Coil 21 41 - -
Prci8g2074 646 CDD RING-HC_Bre1-like 586 642 - -
Prci8g2074 646 Coils Coil 79 113 - -
Prci8g2074 646 Gene3D - 435 596 - -
Prci8g2074 646 ProSitePatterns Zinc finger RING-type signature. 609 618 IPR017907 -
Prci8g2074 646 MobiDBLite consensus disorder prediction 46 64 - -
Prci8g2074 646 PANTHER RING FINGER PROTEIN-RELATED 18 646 IPR013956 GO:0004842|GO:0010390
Prci8g2074 646 ProSiteProfiles Zinc finger RING-type profile. 594 632 IPR001841 -
Prci8g2074 646 SMART ring_2 594 632 IPR001841 -
Prci8g2074 646 Pfam Zinc finger, C3HC4 type (RING finger) 593 635 - -
Prci8g2074 646 Coils Coil 171 212 - -
Prci8g2074 646 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 597 643 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2074 Prci-Chr8 22617803 22630323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2074 568 641 RAD5 or RAD16-like Gene Family AT5G05130 27.711 6.13e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2074 K10696 - qsa:O6P43_020782 987.638