Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2026 ATGGGAAATCTTTTCTTTTATTTCTCCTTCTCCATTTTCTCCATGCTCTGTCTCATGGTTTGCCCATCTTTATGTCATTCCAATTTTACTCTCGATGGATTGACACTTCTTGCTTTCAAATCTTCTATTAGGGACCCGTACAATCACTTGAAAAATTGGTCCAACCCATCATCTTCCTTTTGCAACTGGTTTGGAGTCACATGTGATTCTAACCATGAGAAAGTGAGAATCCTGAGTCTTCCTGAGATGGATCTTGAAGGCACCTTACCATCACAAATTGGAAATCTATCCTTCCTAGAAAAACTTGAACTACAAAGCAATAACTTTCATGGTGGGCTGCCAAAAGAGTTGCTTCAATTGCGCAAATTGGAAATTCTAAACTTGAGTTATAATGCACTTAGTGGAGAAATTCCGACTTGGATTGGAAGCTTGTTTATGCTTCAACACTTGAGTCTTGGCAATAATAGTTTTGGAGGTCTCATTCCTCCAAGCATATGCAATTTGTCTAAACTTCAACACCTGAAAGTTTTATTCATTTCAAGAAACATGCTTTCAGGAAGTATACCTCCAACTATCTCTAACTTATCATCACTTGAACACATTTCTTTGTCTGTCAACTTCTTAGAAGGACATATTCCCAAAGAAATGAATAAGCTTACAAATCTGAAAAATATGTACATGGGTATGAATAAGTTGTCAGGGCAGATACCAAGCATCGGAAACTTGTTCATGCTTGAAAATTTATATCTTACAAGCAATAGCCTCCAAGGAAATATTCCGAATGAAATAAGCAATCTCACAAATTTGAATAGCATATACTTAAGTTTTAATCAATTGTCTGGTCACATACCAAGAGGCATTGGCAAGTTCACTAGGCTTGAAGAATTATTTCTGGACAACAATAACTTAAAAGGAAAAATTCCCAGTGAAATTATAAGTCTTGCAAATCTGAGGATGATCAGCCTAACGGTTAATCAGCTATCTGGGCCCATACCAGGAGGCATTGGAAACTTGACTATGCTTCAACACTTGTATCTTGATAGCAATGATTTAGAAGGATCAATACCTATGGAAATTGGTAATCTTCAACAGCTTGAGATATTACAATTATCTCAAAACAAATTGAGAGGGTCTATTCCATCAGAAATTTTCAACATGTCAACTTTGGAGGTCCTGTCTCTAGCAAACAATTTTCTCTCAGGAAGTCTTCCATCAAAATTTGGATTTGGCCTTTCTAATCTACAAATGCTTTATTTATGGGGCAACAAACTTTCTGGAAAAATCCCAAATACTATATCTAATGCTTCTAAGCTAACCACTCTAGAATTGGAGGAAAATAATTTTGAAGGGGTTTTACCAAACACACTTGGGAATTTAAGATACTTAGAAACCCTTTCAGTGAGTAATAATAATTTTACCATTATAGATAGTTCTGATTCTAAAACTGGCCTTTTCAATTCAATGTCAAATTGTAGACATTTGAAAAGTTTGATTCTCTCAAAGAATCCACTGCATATGAAACTTCCCAAGTCCATTGGAAACTTGTCTAATTCTCTACAGGTGCTAATTGTAGACTCATGCAGGATTAATGGTAACATACCATCAGAAATTGGGAATCTATCTAACTTGTTCCAACTATCATTGGCTGAAAATTTTTTAAGTGGATCAATACCAAAAACAATTAGCAACATACAGGCTCTTCAGGATTTGAATCTTAAAGGCAATGAACTTGGTGGCTTGATTGTTGATGAGCTTTGTCAAATTAGAAGACTTGCCTATCTATATTTATCTCGAAACAAGTTTTCTGGAGCAATTCCGCCTTGCTTTGGAAATCTTATGTCCCTGCAAAAACTTTACTTGGACTCCAATGAGTTGATTTCTGATATACCTTCTTCCTTTTGGAATTTAATTGGTATATTGGAAGTAAACCTATCTTCCAATGTTTTAGTTGGAAATCTATCATTCAAGATTGGCAACTTAATAGCACTTGTATCATTAGATTTGTCAAGAAATTGTATATCAGGCATCATTCCATCAGCCATAGGTGGCTTGCAAAATTTGCAAATTCTCTCATTGGCACATAACAAACTGCATGGGAAGATTCCTGAATCACTTGGGAATTCTCTAAGCTTAGTGAAGTTAGACTTTTCCCAAAATCAACTATCTGGTGAGATTCCTAAATCTATAGAGTCACTTATATCCCTTGTGTACATCAATCTCTCTTTTAATGAACTACAGGGTGAGATTCCAAGTGGCGGAGTCTTCAAAATTTTAACATTTGAATCTTTCATGATGAATAAAGCACTTTGTGGTGAGCCACAAATGCAAGTGTCTCCATGCAAAAAAGGAACACGTAAAAGGTCAATGGAAAAATTGATTTTGTTGAAATGTGTATTGCCAATGGTTTTGTCCATAGCTTTAATTGCTACAGGCATTGTGATCTTTCAACAAAAGCAAATAAATTCTAGGCATACCATTAGAAAAGTTTTATCTACTTTAGGAATGCCAAGAAAGATTTCTTATTTTGAAATTTTGGATGCAACTCATAGATTTGATGAGAGTAACTTACTTGGAAAGGGAAGTTTTGGTTCTGTGTTCAAAGGAAAACTTTCAAGTGGAATAATGGTTGCTGTTAAAATATTCAATTTTGACTCAGAAGCATTGTCAAGGAGCTTTGAGGTAGAATGCAACGCAATGCGTAATTTGCGCCATCGAAATCTAGTGAAGATCATTAGTAGTTGTTCCAATGCTGATTTGAAGTGTTTGATAATGGAGTTTATTCCTAATGGAAGCCTTGAAAAATGGTTATATTTTGATAACAATCATTTGGATTTTCTACAAAGGCTGAATATAATGATAAATGTAGCATATGCTTTAGAATATCTTCATCATGACTTGTCAACACCAGTAGTCCATTGTGATTTGAAACCAAGTAACATTTTGTTGGATGATAATATGGTTGCCCATGTGAGTGACTTTGGAATTGCCAAATTTCTAGATAAAGGGAAATCTAAGACGCACACTGAGACAATAGCTACAATCGGTTATATGGCACCAGAATATGGATCTACTGGAATTGTGTCAACAAAAGTTGATGTGTATAGCTATGGAATAATACTAATGGAAGTGTTCACAAGGAAAAAGCCAACAGAAGGTATGTTTGTCGATGGATTAAGCTTAAAGACTTGGATAAGTGAATCAATGTCACATGCATTGATTCAAGTCATGGATTCCAATTTATTACAAGGAGATGAACAATATATTGGTAATATTTTGACAACTACATCCACTATATTTAAATTGGCCTTGACTTGCTGCTCTGATTTTCCAACAGGACGTTGCAATATGTTAGATGTTGTAGCGTCATTGAACAAGATCAAGGACCTATTTATGCAAAGAAGTCAAGTTAAAAAAATTTAA 3420 0.3497 MGNLFFYFSFSIFSMLCLMVCPSLCHSNFTLDGLTLLAFKSSIRDPYNHLKNWSNPSSSFCNWFGVTCDSNHEKVRILSLPEMDLEGTLPSQIGNLSFLEKLELQSNNFHGGLPKELLQLRKLEILNLSYNALSGEIPTWIGSLFMLQHLSLGNNSFGGLIPPSICNLSKLQHLKVLFISRNMLSGSIPPTISNLSSLEHISLSVNFLEGHIPKEMNKLTNLKNMYMGMNKLSGQIPSIGNLFMLENLYLTSNSLQGNIPNEISNLTNLNSIYLSFNQLSGHIPRGIGKFTRLEELFLDNNNLKGKIPSEIISLANLRMISLTVNQLSGPIPGGIGNLTMLQHLYLDSNDLEGSIPMEIGNLQQLEILQLSQNKLRGSIPSEIFNMSTLEVLSLANNFLSGSLPSKFGFGLSNLQMLYLWGNKLSGKIPNTISNASKLTTLELEENNFEGVLPNTLGNLRYLETLSVSNNNFTIIDSSDSKTGLFNSMSNCRHLKSLILSKNPLHMKLPKSIGNLSNSLQVLIVDSCRINGNIPSEIGNLSNLFQLSLAENFLSGSIPKTISNIQALQDLNLKGNELGGLIVDELCQIRRLAYLYLSRNKFSGAIPPCFGNLMSLQKLYLDSNELISDIPSSFWNLIGILEVNLSSNVLVGNLSFKIGNLIALVSLDLSRNCISGIIPSAIGGLQNLQILSLAHNKLHGKIPESLGNSLSLVKLDFSQNQLSGEIPKSIESLISLVYINLSFNELQGEIPSGGVFKILTFESFMMNKALCGEPQMQVSPCKKGTRKRSMEKLILLKCVLPMVLSIALIATGIVIFQQKQINSRHTIRKVLSTLGMPRKISYFEILDATHRFDESNLLGKGSFGSVFKGKLSSGIMVAVKIFNFDSEALSRSFEVECNAMRNLRHRNLVKIISSCSNADLKCLIMEFIPNGSLEKWLYFDNNHLDFLQRLNIMINVAYALEYLHHDLSTPVVHCDLKPSNILLDDNMVAHVSDFGIAKFLDKGKSKTHTETIATIGYMAPEYGSTGIVSTKVDVYSYGIILMEVFTRKKPTEGMFVDGLSLKTWISESMSHALIQVMDSNLLQGDEQYIGNILTTTSTIFKLALTCCSDFPTGRCNMLDVVASLNKIKDLFMQRSQVKKI 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2026 1139 SUPERFAMILY Protein kinase-like (PK-like) 825 1123 IPR011009 -
Prci8g2026 1139 Pfam Leucine rich repeat 659 697 IPR001611 GO:0005515
Prci8g2026 1139 Pfam Leucine rich repeat 412 472 IPR001611 GO:0005515
Prci8g2026 1139 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Prci8g2026 1139 Pfam Leucine rich repeat 589 649 IPR001611 GO:0005515
Prci8g2026 1139 Gene3D Ribonuclease Inhibitor 336 479 IPR032675 -
Prci8g2026 1139 FunFam Serine-threonine protein kinase plant-type 831 926 - -
Prci8g2026 1139 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 141 236 - -
Prci8g2026 1139 PANTHER LEUCINE RICH REPEAT KINASE 2 588 1129 - -
Prci8g2026 1139 SMART LRR_typ_2 411 435 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 612 635 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 290 314 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 684 708 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 266 289 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 96 120 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 171 195 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 362 386 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 338 361 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 732 756 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 144 168 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 660 683 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 459 487 IPR003591 -
Prci8g2026 1139 SMART LRR_typ_2 436 458 IPR003591 -
Prci8g2026 1139 ProSitePatterns Protein kinases ATP-binding region signature. 857 879 IPR017441 GO:0005524
Prci8g2026 1139 Pfam Leucine Rich Repeat 147 168 IPR001611 GO:0005515
Prci8g2026 1139 Gene3D Phosphorylase Kinase; domain 1 834 926 - -
Prci8g2026 1139 SUPERFAMILY L domain-like 518 773 - -
Prci8g2026 1139 Pfam Protein kinase domain 852 1116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2026 1139 SMART serkin_6 851 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2026 1139 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 487 784 - -
Prci8g2026 1139 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 241 475 - -
Prci8g2026 1139 ProSiteProfiles Protein kinase domain profile. 851 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2026 1139 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Prci8g2026 1139 Gene3D Ribonuclease Inhibitor 175 335 IPR032675 -
Prci8g2026 1139 Gene3D Transferase(Phosphotransferase) domain 1 927 1138 - -
Prci8g2026 1139 FunFam Leucine-rich repeat receptor-like kinase 33 140 - -
Prci8g2026 1139 SMART LRR_sd22_2 612 631 - -
Prci8g2026 1139 SMART LRR_sd22_2 411 437 - -
Prci8g2026 1139 SMART LRR_sd22_2 219 244 - -
Prci8g2026 1139 SMART LRR_sd22_2 708 734 - -
Prci8g2026 1139 SMART LRR_sd22_2 684 707 - -
Prci8g2026 1139 SMART LRR_sd22_2 144 170 - -
Prci8g2026 1139 SMART LRR_sd22_2 290 316 - -
Prci8g2026 1139 SMART LRR_sd22_2 362 388 - -
Prci8g2026 1139 SMART LRR_sd22_2 171 197 - -
Prci8g2026 1139 SMART LRR_sd22_2 540 566 - -
Prci8g2026 1139 SMART LRR_sd22_2 266 289 - -
Prci8g2026 1139 SMART LRR_sd22_2 491 517 - -
Prci8g2026 1139 SUPERFAMILY L domain-like 45 208 - -
Prci8g2026 1139 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 927 1136 - -
Prci8g2026 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 970 982 IPR008271 GO:0004672|GO:0006468
Prci8g2026 1139 Gene3D Ribonuclease Inhibitor 480 788 IPR032675 -
Prci8g2026 1139 SUPERFAMILY RNI-like 169 525 - -
Prci8g2026 1139 Gene3D Ribonuclease Inhibitor 31 174 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2026 Prci-Chr8 21296736 21304972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2026 32 652 Receptor kinase-like Gene Family AT3G47570 34.548 9.63e-74 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci8g2026 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2026 - K13420 qsa:O6P43_031966 1100.89