Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2025 ATGACAGTTCAAGATCAACACGTGGTCGAGATTGGTGAAGGAAGCAAGCTCTGTTCTGCAACTCAAATAAGGAAGATGGAAACCAGAAATCGAAATATTCCGAATGAAATAAGCAATCTTACAAGTGTGAGTTGCATATACGCAAGTGCTAATCAATTGTCTGGTCATATACCAAGAGGCATTGGCAAGTTCACTCGGCTTCAAGAGTTATTTTTGGACAACAATAACTTAGAAGGAAATATTCCCAATGAAATTATAAGTCTTGCAAATCTGAAGATGATGAGCCTAAGGGTTAATCAGCCATCTGGCCCCATACCAAGAGGCATTGGAAACTTGACTGTGCTTCAACAGTTGTATCTTGATAGCAATAATTTAGAAGGATCAATACCTATGGAAATTGGTAATCTTCAACAGCTTCAGATATTAGATTTGTCTCAAAACAAATTTAGAGGATTTATTCCATCAGAAATTTTCAACATGTCAACTTTGGAGGTCTTGTCTCTCTCAAACAATTCTCCATCAAGAAGTCTTCCATCAAATTTTGGATTTGGTGGCCTTTCTAATCTTCAAAGGTTTTATTTATGGGGCAACAAACTTTTTGGAAAAATCCCAAATACTATATCCCATGCTTCAAAGCTAACCGCTCTAGAATTGGACAACAATAATTTTGAAGGGGTTTTACCAAACACACTTGGGCATTTAAGATACTTAGAAACCTTTTCAAATGCAATTGGTATATTGGAAGTAAACCTATCTTCTAATGTTTTAGTTGGAAATCTATCATTCAAGATTGGCAACTTAACAGCACTTATATCATTAGATTTGTCAATAAATCGTATATCAGGCATCATTCCATCAGTAATAGGTGGCTTGCAAAATTTGCAAATTCTCTCATTGGCACATAACAAATTGCATAGGAAGATTCCTGAATCACTTGGGAATTCTCCAAGCTTAGTAAAATTTGATGAGAGTAACTTACTTGGAAGGGAAAGTTTTGGTTCTGTGTTCAAAGGAAAACTTTCAAGTGGAATAATGGTTGCTATTAAAATATTCAATTTTGACTCAGAAGCATTGTCAAGGAGCTTTGAGGTGGAATGTGACGCAATGTGTAATTTGTGCCATCAAAATTTGGTGAAGATCATTTGTAGTTGTTCCAATGCCGATTTGAAGTGTTTGATAATGGAGTTCATTCCTAATGGAAGCCTTGAAAAATGGTTATATTTTGATAACTATCATTTAGATTTTCTACAAAGGTTGAATATAATGATAAATGTAGCATTTCCTTCAGAATATCTTCATCATGACTTGTCAACACCAGTAGTCCATTGTGATTTGAAACCAAGTAACATTTTGTTGGATGATAATATGGTTGCCCATGTGAGTGACTTTGGAATTGCCCAATCTTTAGATAAAGGGAAATCTAAGATGCACACCGAGATAATATCTACAATTGGTTATATCGCACCAGGTAGTAACTAG 1479 0.3516 MTVQDQHVVEIGEGSKLCSATQIRKMETRNRNIPNEISNLTSVSCIYASANQLSGHIPRGIGKFTRLQELFLDNNNLEGNIPNEIISLANLKMMSLRVNQPSGPIPRGIGNLTVLQQLYLDSNNLEGSIPMEIGNLQQLQILDLSQNKFRGFIPSEIFNMSTLEVLSLSNNSPSRSLPSNFGFGGLSNLQRFYLWGNKLFGKIPNTISHASKLTALELDNNNFEGVLPNTLGHLRYLETFSNAIGILEVNLSSNVLVGNLSFKIGNLTALISLDLSINRISGIIPSVIGGLQNLQILSLAHNKLHRKIPESLGNSPSLVKFDESNLLGRESFGSVFKGKLSSGIMVAIKIFNFDSEALSRSFEVECDAMCNLCHQNLVKIICSCSNADLKCLIMEFIPNGSLEKWLYFDNYHLDFLQRLNIMINVAFPSEYLHHDLSTPVVHCDLKPSNILLDDNMVAHVSDFGIAQSLDKGKSKMHTEIISTIGYIAPGSN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2025 492 SUPERFAMILY L domain-like 30 327 - -
Prci8g2025 492 Gene3D Phosphorylase Kinase; domain 1 321 396 - -
Prci8g2025 492 Pfam Leucine Rich Repeat 212 234 IPR001611 GO:0005515
Prci8g2025 492 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515
Prci8g2025 492 Gene3D Ribonuclease Inhibitor 182 241 IPR032675 -
Prci8g2025 492 Pfam Protein tyrosine and serine/threonine kinase 325 489 IPR001245 GO:0004672|GO:0006468
Prci8g2025 492 SMART LRR_typ_2 136 160 IPR003591 -
Prci8g2025 492 SMART LRR_typ_2 231 254 IPR003591 -
Prci8g2025 492 SMART LRR_typ_2 267 290 IPR003591 -
Prci8g2025 492 SMART LRR_typ_2 291 315 IPR003591 -
Prci8g2025 492 SMART LRR_typ_2 64 88 IPR003591 -
Prci8g2025 492 SMART LRR_typ_2 112 135 IPR003591 -
Prci8g2025 492 SMART LRR_typ_2 186 210 IPR003591 -
Prci8g2025 492 PRINTS Leucine-rich repeat signature 270 283 - -
Prci8g2025 492 PRINTS Leucine-rich repeat signature 291 304 - -
Prci8g2025 492 PANTHER RECEPTOR-LIKE PROTEIN 55 320 489 - -
Prci8g2025 492 SUPERFAMILY Protein kinase-like (PK-like) 320 489 IPR011009 -
Prci8g2025 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Prci8g2025 492 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 84 177 - -
Prci8g2025 492 Gene3D Ribonuclease Inhibitor 242 320 IPR032675 -
Prci8g2025 492 Gene3D Transferase(Phosphotransferase) domain 1 397 491 - -
Prci8g2025 492 Pfam Leucine rich repeat 270 320 IPR001611 GO:0005515
Prci8g2025 492 Pfam Leucine rich repeat 115 171 IPR001611 GO:0005515
Prci8g2025 492 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Prci8g2025 492 SMART serkin_6 321 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2025 492 ProSiteProfiles Protein kinase domain profile. 321 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2025 Prci-Chr8 21279900 21284995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2025 17 489 Receptor kinase-like Gene Family AT3G47570 33.686 1.27e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci8g2025 PK_Tyr_Ser-Thr 9.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2025 - K13420 pcin:129317454 968.763