Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci8g2022 ATGGAGCCCACCTGGTTGGAGCCATCACCTATTTTTACCCTCGACGGATTGGCACTTCTTGCTTTCAGATCTTCTGTTAGAGACCCTTATAATCACTTGAAGAATTGGTCCAACTCATCATCTTCCTACTGCAAGTGGTTCGGAGTCACATGCGATTCTAACAATGAGAGAGTGAGAATCCTAAGTGTTCCTGAGATAGGTCTTGAGGGCACCTTACCCTTACAAATTGGAAATCTATCCTTCCTAGAAAAACTTGAACTACAGAGCAACAACTTTCATGGTGGGTTGCCAAAAGAGTTGCTTCAATTGCACAAATTGAAAATTCTAAACTTGAGTTATAATACTTTTAGCGGAGAAATTCTGACTTGGATTGGAAGCTTGTTTATGCTTCAACACTTGAGTCTTAGCAATAATAGTTTTGGAGGTCTCATTCCTCCAAGCATATGGAATTTGTCTAAGTTGGAGACCTTGGATTTGAAGTCTAATTCTATCAATGGATCTATTCCGGTGGATATTGGAAGACTTCAACACCTGAAATTTTTAAGCATTTCTCGAAACATGCTTTCAGGAAGTATACCTCCAATTATCTCTAACTTATCATCACTTGAGCACATCTCTTTTTCTGTCAACTTCTTAGAAGGACATATTCCCAAAGAAATGAATAAGCTTACAAATCTGAAAAATATGTACATGGGTATGAATAAGTTGTCTGGGCAAGTACCGAGCATTGGAAATTTGGTCATGCTTGAAAATTTATATCTCGCAAGCAATGACCTCCAAGGAAATATTCCGAATGAAATAAGCAATCTTACAAATTTGAGCAGCATATACTTAAGTGCTAATCAATTGTCTGGTCACATGCCAAGAGGCATTGGCAAGTTCACTAGGCTTCAAGAGTTATTTCTGGATAACAATCACTCAGAAGGAAATATTCCCAATGAAATTATAAGTCTTGCAAATCTGAAGATGATGAGCCTAAGGGTTAATCAGCTATCTGGCCCCATACCAAGAGGCATTGGAAACTTGACTGTGCTTCAACAGTTGTATCTTTGTAGCAATAATTTAGAAGGATCAATACCTATGGAAATTGGTAATCTTCAACAGCTTGAGATATTAGAATTGTCTCAAAACGAATTGAGAGGGTTTATTCCATCAGAAATTTTCAACATGTCAACTTTGGAGGTCTTGTCTCTTTCAAACAATTCTCTATCAGGAAGTCTTCCATCAAATTTTAGATTTGGCCTTTCTAATCTACAAATACTTTATCTGTGGGGCAACAAACTTTCTGGAAAAATCCCAAATACTAAATCCAATGCTTCTAAGCTAACCACTCTAGAATTGGAGGACAATAATTTTGAAGGGGTTTTTCCAAACACACTTGGGCATTTAAGATACTTAGAAACCCTTTTAGTAAGTGATAATAATTTTACCATTATGGATAGTTTTGATTCTGAAACTAGCTTTTTCAATTCATTGTCAAATTGTAGACATTTGAAAAGTTTGATTCTCTCAACAAATCCACTGCATATGAAACTTCCCAAGTCCATTGGAAACTTGTCTAATTCTCTACAGGTGCTACTTGTAGACTCGTGCAGGATTAATGGTAACATACCATCAGAAATTGGGAATCTATCTAACTTGTTCCAGCTATCATTAGCTAAAAATTTTTTACATGGATCAATACCAAAAGCAATTGGCAACATACAGGCTCTTCAAGATTTGAATCTTGAAGGCAATGAGCTAGGTGGCTTGAATGTTGATGAGCTTTGTGAAATTAGAAGACTCACCTATCTACATTTATCTCGAAACAAGTTTTCTGGAGCAATGCCACCTTGCTTAGGAAATCTTATGTCCTTGCAAAAACTTTACTTAGACTCCAATAAGTTGATTTCTGAGATACCTTCTTCCTTTTGGAATCTAACTGGTATATTGGAAGTAAACCTTTCTTCCAATGTTTTAGTTGGAAATCTATCATTCAAGATTAGTAACTTGAAAGAACTTATATCATTGGATTTGTCAAGAAATTGTATATCAGGCATCATTCCATCAACCATAGGTGGCTTGCAAAATTTACAAATTCTCTCATTGGCACATAACAAATTGCATGGGAAGATTCCTGAATCACTTGAGAATTTGCTAAGCTTAGTAAAGTTAGACCTTTCCCAAAATCAACTGATTGGTGAGATTCCTAAATCTCTGGAGTCACTTATATCCCTTGTGTACGTTAATCTCTCTTTTAATGAACTACAGGGTGAGATTCCAAGTGGCGGAGTCTTCAAAAATTTAACATTTGAATCTTTCATGATGAATAAAGAACTTTGTGGTGAGCCACAAATGCAAGTGTCTCCATGCAAAAAAGGAACAGGTGCAACTCATAGATTTGATGAGAGTAACTTACTTGAAAGGGGAAGTTTTGGTTCTGTGTTCAAAGGAAAACTTTCAAGTGGAATAATGATTGCTGTTAAAATATTCAATTTTGACTCAAAAGTGTTGTCAAGGAGCTTTGAGGTAGAATGCGATGCAATGCGTAATTTGCACCATCGAAATCTGGTGAAGATCATTAGTAGTTGTTCCAATGCCGATTTGAAGTGTTTGATAATGGAGTTCATTCCTAATGGAAGCCTTGAAAAATGGTTATATTTTGATGACTATCATTTGGATTTCTTACAAAGGTTGAATATAATGATAAATGTAGCATCTGCTTTAGAATATCTTCATCATGACTTGTCAACACTAGTAGTCCATTGTGATTTGAAACCAAGTAACATTTTGTTGGATGATAATATGGTTGCCCATACCAGCATGAAAGTCATCAAGCAGGTGTTCTTGCACATTCTGACATCACCGGACGCAGCTAACATCGGCGGGTTTATTTCCGCAAACGTTCTGACGTCTCCAGTTCTTCCAGCTCTCAAAAGATCTTCTAAGCATGGCCAAAGTGGATATAGCAAAGCCATTAAAGATATTGTCTAA 2973 0.3646 MEPTWLEPSPIFTLDGLALLAFRSSVRDPYNHLKNWSNSSSSYCKWFGVTCDSNNERVRILSVPEIGLEGTLPLQIGNLSFLEKLELQSNNFHGGLPKELLQLHKLKILNLSYNTFSGEILTWIGSLFMLQHLSLSNNSFGGLIPPSIWNLSKLETLDLKSNSINGSIPVDIGRLQHLKFLSISRNMLSGSIPPIISNLSSLEHISFSVNFLEGHIPKEMNKLTNLKNMYMGMNKLSGQVPSIGNLVMLENLYLASNDLQGNIPNEISNLTNLSSIYLSANQLSGHMPRGIGKFTRLQELFLDNNHSEGNIPNEIISLANLKMMSLRVNQLSGPIPRGIGNLTVLQQLYLCSNNLEGSIPMEIGNLQQLEILELSQNELRGFIPSEIFNMSTLEVLSLSNNSLSGSLPSNFRFGLSNLQILYLWGNKLSGKIPNTKSNASKLTTLELEDNNFEGVFPNTLGHLRYLETLLVSDNNFTIMDSFDSETSFFNSLSNCRHLKSLILSTNPLHMKLPKSIGNLSNSLQVLLVDSCRINGNIPSEIGNLSNLFQLSLAKNFLHGSIPKAIGNIQALQDLNLEGNELGGLNVDELCEIRRLTYLHLSRNKFSGAMPPCLGNLMSLQKLYLDSNKLISEIPSSFWNLTGILEVNLSSNVLVGNLSFKISNLKELISLDLSRNCISGIIPSTIGGLQNLQILSLAHNKLHGKIPESLENLLSLVKLDLSQNQLIGEIPKSLESLISLVYVNLSFNELQGEIPSGGVFKNLTFESFMMNKELCGEPQMQVSPCKKGTGATHRFDESNLLERGSFGSVFKGKLSSGIMIAVKIFNFDSKVLSRSFEVECDAMRNLHHRNLVKIISSCSNADLKCLIMEFIPNGSLEKWLYFDDYHLDFLQRLNIMINVASALEYLHHDLSTLVVHCDLKPSNILLDDNMVAHTSMKVIKQVFLHILTSPDAANIGGFISANVLTSPVLPALKRSSKHGQSGYSKAIKDIV 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci8g2022 990 SMART LRR_typ_2 415 442 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 79 103 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 318 342 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 127 150 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 664 687 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 151 175 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 366 390 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 270 294 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 688 711 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 616 639 IPR003591 -
Prci8g2022 990 SMART LRR_typ_2 712 736 IPR003591 -
Prci8g2022 990 SUPERFAMILY L domain-like 15 288 - -
Prci8g2022 990 Gene3D Ribonuclease Inhibitor 339 412 IPR032675 -
Prci8g2022 990 FunFam Receptor-like protein kinase 7 196 386 - -
Prci8g2022 990 Gene3D Ribonuclease Inhibitor 174 338 IPR032675 -
Prci8g2022 990 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 491 788 - -
Prci8g2022 990 Gene3D Ribonuclease Inhibitor 484 787 IPR032675 -
Prci8g2022 990 SMART LRR_sd22_2 270 285 - -
Prci8g2022 990 SMART LRR_sd22_2 616 642 - -
Prci8g2022 990 SMART LRR_sd22_2 318 344 - -
Prci8g2022 990 SMART LRR_sd22_2 223 248 - -
Prci8g2022 990 SMART LRR_sd22_2 151 172 - -
Prci8g2022 990 SMART LRR_sd22_2 712 738 - -
Prci8g2022 990 SMART LRR_sd22_2 688 711 - -
Prci8g2022 990 SMART LRR_sd22_2 544 570 - -
Prci8g2022 990 SMART LRR_sd22_2 175 201 - -
Prci8g2022 990 SMART LRR_sd22_2 366 392 - -
Prci8g2022 990 SMART LRR_sd22_2 415 437 - -
Prci8g2022 990 SUPERFAMILY L domain-like 523 777 - -
Prci8g2022 990 Pfam Leucine rich repeat N-terminal domain 15 52 IPR013210 -
Prci8g2022 990 ProSiteProfiles Protein kinase domain profile. 794 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2022 990 SUPERFAMILY Protein kinase-like (PK-like) 781 931 IPR011009 -
Prci8g2022 990 Gene3D Phosphorylase Kinase; domain 1 788 869 - -
Prci8g2022 990 Pfam Protein kinase domain 798 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2022 990 SUPERFAMILY RNI-like 251 589 - -
Prci8g2022 990 SMART serkin_6 794 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci8g2022 990 Gene3D Ribonuclease Inhibitor 413 483 IPR032675 -
Prci8g2022 990 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 379 941 - -
Prci8g2022 990 Pfam Leucine rich repeat 416 476 IPR001611 GO:0005515
Prci8g2022 990 Pfam Leucine rich repeat 130 188 IPR001611 GO:0005515
Prci8g2022 990 Pfam Leucine rich repeat 593 653 IPR001611 GO:0005515
Prci8g2022 990 Pfam Leucine rich repeat 662 701 IPR001611 GO:0005515
Prci8g2022 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 913 925 IPR008271 GO:0004672|GO:0006468
Prci8g2022 990 Gene3D Transferase(Phosphotransferase) domain 1 870 974 - -
Prci8g2022 990 Gene3D Ribonuclease Inhibitor 14 171 IPR032675 -
Prci8g2022 990 FunFam Leucine-rich repeat receptor protein kinase EMS1 387 481 - -
Prci8g2022 990 Pfam Leucine Rich Repeat 714 736 IPR001611 GO:0005515
Prci8g2022 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 12 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci8g2022 Prci-Chr8 20979746 20995826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci8g2022 790 934 Receptor kinase-like Gene Family AT5G46330 36.913 1.70e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci8g2022 Pkinase 7.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci8g2022 - K13420 cave:132165852 789.645